Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0217800-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:6432336:6435651:1 gene:Os01g0217800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DJ-1/PfpI domain containing protein B, DJ-1 protein B description:ThiJ/PfpI domain containing protein. (Os01t0217800-01)
Sequence

ATGGCGATGGCGGCCGCTTCCGCCTCCGCCATGGCGAGGCGGGCCGCTTCGTGGCCACGG
CTCCTCCTCCTCTCCCGCGCCTTCGCCGCCGCCGCCGCTGAGCCGAAGCGGGTGCTCGTG
CCGGTCGCGGACGGCACGGAGCCGGTGGAGGCGGCCGCCACCGCCGACGTGCTCAACCGC
GCCGGCGCGCGGGTCACCGTCGCCACGGCTGACCCCGCGGGCGACGACCGTGGCCTCCTG
GTGGAGGCCGCGTTCGGGGTCAAGCTCGTCGCCGACGGCCGCGTCGCCGACCTGGAAGGC
GAGGCCTTTGACCTCATCGCCCTACCCGGAGGAATGCCGGGATCAGCTAACCTCAGAGAT
TGCAAGGTGCTGGAGAAGATGGTCAAGAAGCAGGCAGAGCAGGGTGGCCTCTACGCCGCC
ATCTGCGCCACGCCGGCGGTGACGCTGGCTCACTGGGGCTTGCTCAAAGGCTTAAAGGCG
ACTTGCTATCCATCATTCATGGAGAAGTTCACCGCTGAAATTATCCCTGTGAACTCTAGG
GTGGTGGTAGATAGAAATGCAGTGACCAGCCAAGGGCCAGCAACAGCAATTGAATATGCT
CTCGCTTTGGTGGAGCAACTGTACGGCAAAGAGAAGTCGGAGGAGGTTGCAGGACCCTTG
TATGTTCGTCCTCAACCTGGGGTTGACTATGTCATAGATGAGTTCAATTCAGTTGAGTGG
AAATGCAGTGGTACACCTCAGGTTCTTGTGCCAGTTGCTAATGGTTCGGAGGAAATGGAA
GCTCTTAATTTAATAGATATCTTGCGTAGAGCAGGAGCAAATGTTACTGTTGCATCAGTT
GAGGATAAGTTGCAAGTTGTGACCCGCCGCCACAAATTTAACCTGATAGCTGATATTATG
GTGGAAGAAGCTGCCAAAAGGGAATTCGATCTGATTGTCATGCCGGGTGGTCTGCCAGGT
GCTCAAAAGCTTTCTAGTACAAAGGTACTTGTAGATTTACTAAAGAAACAGGCAGAATCT
AATAAACCATATGGTGCAATATGCGCTTCTCCTGCTTATGTTCTCGAGCCCCATGGTTTA
CTGAAGGGGAAGAAGGCAACATCATTTCCACCAATGGCACACCTGCTTACTGATCAGAGT
GCATGTGACAGTAGGGTGGTTGTTGATGGTAACCTTATCACTAGCAAAGCCCCAGGCTCC
GCGACAGAGTTCGCGCTAGCCATTGTTGAGAAGCTGTTTGGTCGAGAGAAAGCGGTCAGT
ATAGCGAAGGAGTTGATTTTTATGTGA

Peptide Sequence

PEP ID

Os01t0217800-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:6432336:6435651:1 gene:Os01g0217800 transcript:Os01t0217800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DJ-1/PfpI domain containing protein B, DJ-1 protein B description:ThiJ/PfpI domain containing protein. (Os01t0217800-01)
Sequence

MAMAAASASAMARRAASWPRLLLLSRAFAAAAAEPKRVLVPVADGTEPVEAAATADVLNR
AGARVTVATADPAGDDRGLLVEAAFGVKLVADGRVADLEGEAFDLIALPGGMPGSANLRD
CKVLEKMVKKQAEQGGLYAAICATPAVTLAHWGLLKGLKATCYPSFMEKFTAEIIPVNSR
VVVDRNAVTSQGPATAIEYALALVEQLYGKEKSEEVAGPLYVRPQPGVDYVIDEFNSVEW
KCSGTPQVLVPVANGSEEMEALNLIDILRRAGANVTVASVEDKLQVVTRRHKFNLIADIM
VEEAAKREFDLIVMPGGLPGAQKLSSTKVLVDLLKKQAESNKPYGAICASPAYVLEPHGL
LKGKKATSFPPMAHLLTDQSACDSRVVVDGNLITSKAPGSATEFALAIVEKLFGREKAVS
IAKELIFM

Transcript Sequence

Transcript ID

Os01t0217800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:6432336:6435651:1 gene:Os01g0217800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DJ-1/PfpI domain containing protein B, DJ-1 protein B description:ThiJ/PfpI domain containing protein. (Os01t0217800-01)
Sequence

AGTAGTACAGCGCACAGGCCACGCGTGCGCGTCCACCGAAACAGCGGCGGCGACGACGAG
GCGATCGATTCCTGGACACTCGCGCCACGCCACCCCACTGTCCCTGCACGCTGCAGCTAC
CCCTACTCTACCACTGCCCTCTCCGGCAGGGAAGCGAGGAAGAGGCACGCACCACGAAGT
CGCCACCTCGATTTTTCCGGCGAACGACGCAAGAATAACACCCCCCCCCCCCTTACCTAC
GGGGATAGTGATACGATGGCGATGGCGGCCGCTTCCGCCTCCGCCATGGCGAGGCGGGCC
GCTTCGTGGCCACGGCTCCTCCTCCTCTCCCGCGCCTTCGCCGCCGCCGCCGCTGAGCCG
AAGCGGGTGCTCGTGCCGGTCGCGGACGGCACGGAGCCGGTGGAGGCGGCCGCCACCGCC
GACGTGCTCAACCGCGCCGGCGCGCGGGTCACCGTCGCCACGGCTGACCCCGCGGGCGAC
GACCGTGGCCTCCTGGTGGAGGCCGCGTTCGGGGTCAAGCTCGTCGCCGACGGCCGCGTC
GCCGACCTGGAAGGCGAGGCCTTTGACCTCATCGCCCTACCCGGAGGAATGCCGGGATCA
GCTAACCTCAGAGATTGCAAGGTGCTGGAGAAGATGGTCAAGAAGCAGGCAGAGCAGGGT
GGCCTCTACGCCGCCATCTGCGCCACGCCGGCGGTGACGCTGGCTCACTGGGGCTTGCTC
AAAGGCTTAAAGGCGACTTGCTATCCATCATTCATGGAGAAGTTCACCGCTGAAATTATC
CCTGTGAACTCTAGGGTGGTGGTAGATAGAAATGCAGTGACCAGCCAAGGGCCAGCAACA
GCAATTGAATATGCTCTCGCTTTGGTGGAGCAACTGTACGGCAAAGAGAAGTCGGAGGAG
GTTGCAGGACCCTTGTATGTTCGTCCTCAACCTGGGGTTGACTATGTCATAGATGAGTTC
AATTCAGTTGAGTGGAAATGCAGTGGTACACCTCAGGTTCTTGTGCCAGTTGCTAATGGT
TCGGAGGAAATGGAAGCTCTTAATTTAATAGATATCTTGCGTAGAGCAGGAGCAAATGTT
ACTGTTGCATCAGTTGAGGATAAGTTGCAAGTTGTGACCCGCCGCCACAAATTTAACCTG
ATAGCTGATATTATGGTGGAAGAAGCTGCCAAAAGGGAATTCGATCTGATTGTCATGCCG
GGTGGTCTGCCAGGTGCTCAAAAGCTTTCTAGTACAAAGGTACTTGTAGATTTACTAAAG
AAACAGGCAGAATCTAATAAACCATATGGTGCAATATGCGCTTCTCCTGCTTATGTTCTC
GAGCCCCATGGTTTACTGAAGGGGAAGAAGGCAACATCATTTCCACCAATGGCACACCTG
CTTACTGATCAGAGTGCATGTGACAGTAGGGTGGTTGTTGATGGTAACCTTATCACTAGC
AAAGCCCCAGGCTCCGCGACAGAGTTCGCGCTAGCCATTGTTGAGAAGCTGTTTGGTCGA
GAGAAAGCGGTCAGTATAGCGAAGGAGTTGATTTTTATGTGATTATACACTTGGGCATTT
ATGCATCAGGTGCCTGTCACCTGTGAGTGATGCTTCTGTGAATAACTACTTATGCTGCTT
TCCTAGGAATGCATAATATAAGCCTATAGCAGCATGTGGCAATCCATGTGAATGAGGAAT
AAATGTACATTATGAGTATCATGTGTAAAGAGTCGTCGTTGTT