Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0217000-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:6387860:6390995:-1 gene:Os01g0217000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:trichome birefringence-like 19 description:Protein of unknown function DUF231, plant domain containing protein. (Os01t0217000-01);Similar to Alpha galactosidase. (Os01t0217000-02)
Sequence	ATGAGGGGCCGGGCGGCGGTGTTCGCGGCGGTGCTGGTCGTGTTCCTGGTGGCGTGCACC GCCGCGGCGGCGGCGGCGGCGATTACCATATCGAGGAAGCACCAGCACAGGCCGGCGTCC GGGGCGGCGGCGAAGGCGGCGTGCGACGTGTTCGCGGCGGGGAGCTGGGTGGTGGACGAG TCGTACCCGCTCTACGACTCGGCGACCTGCCCCTTCATCCGCGCCGAGTTCGACTGCCGC CGGTACGGCCGCCCCGACAAGGAGTACCTCAAGTACCGGTGGCAGCCCAGCCCGCCGTGC TCCACGCCCAGGTTCGACGGGGTGGCGTTGCTGAGGATGTGGAGCGGGAAGAAGGTGATG TTCGTGGGGGACTCGCTGGCGCTGAACCAGTACGAGTCGCTGCTGTGCATGCTGCACGCC GCCGCGCCCAACGCCCGGACCACCGTCACGCCGGCGTCGGGGAAGGTCGATCCCCTCACC ACCGCCCGCTTCGAGGAGTTCAACGTGACGATCGTGTACTACCTGACGCACTACCTGGTG GACATTGTCAACGAGAAGGCCGGGCGAGTACTCAAGCTGGACGCCATCGACCAGGCACGC AACTGGCTCAGCGCCGACGTGCTCGTCTTCGATTCCTGGCACTGGTGGCCGCGCTCCGGC CCGACCCAACCATGGGACTACATCCAGGAGGGCAACACGGTGGTGAAGGACATGGACAGG ACGGAGGCGTTCAGCAAGGCGCTCAACACCTGGGCTAGATGGGTCGACGCCAACCTCCTC CAGACCAACACCAGAGTCTTCTTCCAGGGCATCTCCCCCTCTCACTACAGGGGCCAAGAT TGGGGCGACACGGCGAGTGCGACGTGCATGGGGCAGACGCGGCCGGTGAACGGCACGGCG TACCCCGGGGGGCCGATCCCGCAGCAGGCGGTGCTGAGGAGCGCCCTCGCCGGCATGGCG AAGCCGGTGTACCTGCTGGACTTCACCTACCTGTCGCAGCTGAGGAAGGACGCGCACCCG ACCAAGTACAACGGCGGCATCTTCGGCGACGACTGCACCCACTGGTGCGTCGCCGGCCTC CCGGATACCTGGAACGTCCTCTTCTACGCCGCGCTCACCGGCCAGCACTGA

Peptide Sequence

PEP ID	Os01t0217000-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:6387860:6390995:-1 gene:Os01g0217000 transcript:Os01t0217000-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:trichome birefringence-like 19 description:Protein of unknown function DUF231, plant domain containing protein. (Os01t0217000-01);Similar to Alpha galactosidase. (Os01t0217000-02)
Sequence	MRGRAAVFAAVLVVFLVACTAAAAAAAITISRKHQHRPASGAAAKAACDVFAAGSWVVDE SYPLYDSATCPFIRAEFDCRRYGRPDKEYLKYRWQPSPPCSTPRFDGVALLRMWSGKKVM FVGDSLALNQYESLLCMLHAAAPNARTTVTPASGKVDPLTTARFEEFNVTIVYYLTHYLV DIVNEKAGRVLKLDAIDQARNWLSADVLVFDSWHWWPRSGPTQPWDYIQEGNTVVKDMDR TEAFSKALNTWARWVDANLLQTNTRVFFQGISPSHYRGQDWGDTASATCMGQTRPVNGTA YPGGPIPQQAVLRSALAGMAKPVYLLDFTYLSQLRKDAHPTKYNGGIFGDDCTHWCVAGL PDTWNVLFYAALTGQH

Transcript Sequence

Transcript ID	Os01t0217000-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:6387860:6390995:-1 gene:Os01g0217000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:trichome birefringence-like 19 description:Protein of unknown function DUF231, plant domain containing protein. (Os01t0217000-01);Similar to Alpha galactosidase. (Os01t0217000-02)
Sequence	ACACTTCCCGCGACTCCGCGCTCACAAGAACCGGCCATTTCTTGGCAGCTTCTTCTTCTT CTTCCTCCTCGCGCTCGCTCACCTCTCCATTGTTGTCGATTGTGTTGTACTGGTAGGAGG ATGAGGGGCCGGGCGGCGGTGTTCGCGGCGGTGCTGGTCGTGTTCCTGGTGGCGTGCACC GCCGCGGCGGCGGCGGCGGCGATTACCATATCGAGGAAGCACCAGCACAGGCCGGCGTCC GGGGCGGCGGCGAAGGCGGCGTGCGACGTGTTCGCGGCGGGGAGCTGGGTGGTGGACGAG TCGTACCCGCTCTACGACTCGGCGACCTGCCCCTTCATCCGCGCCGAGTTCGACTGCCGC CGGTACGGCCGCCCCGACAAGGAGTACCTCAAGTACCGGTGGCAGCCCAGCCCGCCGTGC TCCACGCCCAGGTTCGACGGGGTGGCGTTGCTGAGGATGTGGAGCGGGAAGAAGGTGATG TTCGTGGGGGACTCGCTGGCGCTGAACCAGTACGAGTCGCTGCTGTGCATGCTGCACGCC GCCGCGCCCAACGCCCGGACCACCGTCACGCCGGCGTCGGGGAAGGTCGATCCCCTCACC ACCGCCCGCTTCGAGGAGTTCAACGTGACGATCGTGTACTACCTGACGCACTACCTGGTG GACATTGTCAACGAGAAGGCCGGGCGAGTACTCAAGCTGGACGCCATCGACCAGGCACGC AACTGGCTCAGCGCCGACGTGCTCGTCTTCGATTCCTGGCACTGGTGGCCGCGCTCCGGC CCGACCCAACCATGGGACTACATCCAGGAGGGCAACACGGTGGTGAAGGACATGGACAGG ACGGAGGCGTTCAGCAAGGCGCTCAACACCTGGGCTAGATGGGTCGACGCCAACCTCCTC CAGACCAACACCAGAGTCTTCTTCCAGGGCATCTCCCCCTCTCACTACAGGGGCCAAGAT TGGGGCGACACGGCGAGTGCGACGTGCATGGGGCAGACGCGGCCGGTGAACGGCACGGCG TACCCCGGGGGGCCGATCCCGCAGCAGGCGGTGCTGAGGAGCGCCCTCGCCGGCATGGCG AAGCCGGTGTACCTGCTGGACTTCACCTACCTGTCGCAGCTGAGGAAGGACGCGCACCCG ACCAAGTACAACGGCGGCATCTTCGGCGACGACTGCACCCACTGGTGCGTCGCCGGCCTC CCGGATACCTGGAACGTCCTCTTCTACGCCGCGCTCACCGGCCAGCACTGATGGCCGGCT GCTGACCTGCTGTCATCACGGCCGGTGATATGATTGAGATAGGATATAGTGGAAATAATT AATCAACAGGAAAAAAGAATTATAGATACAGATTGATTTTATATAGGTCTATATGGAAAG AATTTTTCTCG