Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0213800-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:6221640:6224153:-1 gene:Os01g0213800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PROLIFERATING CELL FACTOR 5 description:Similar to Transcription factor PCF5. (Os01t0213800-01)
Sequence	TCTAGTTTAGTCCCCCACTCCTCTCCTGGTTATGGGATCCGGCGAGGTGGATGGACGCGC ATTGGAGCAGCAACAGTAGCGGCGGGGAAGAAGGCGGCGGGGGATCTGGATCCGAGGCAC CACCACCACCGGGTCACCCACGGCGGCGACGGCGGCGGCGTAGGAGGAGGAGGAAGCGGG GGACAGGAGGAGGCAGATGAGCAGCAGCAGCAGCAGCACGACCACCACCGGCTTCTCCAG CTCCACCACCACCAGGGTGTGCAGCAGGACCAAGAACCGCCGCCTGTTCCCGTCTTCCAC CTCCAGCCGGCGTCCGTGAGGCAGCTGTCGGGCTCCTCCGCCGAGTATGCCCTTCTCTCG CCCATGGGCGACGCCGGCGGCCACTCCCACCACCACCAACACGGCTTCCAGCCTCAGCTC CTCTCCTTCGGTGGCGTCGGCCACCACCACCACCTGCATCAGTTCACGGCGCAGCCACAG CCCCCCGCCGCGTCCCACACTCGGGGTCGTGGAGGTGGAGGTGAGATTGTCCCCGCGACG ACAACTCCACGGTCGAGGGGCGGAGGCGGCGGCGGCGGCGGGGAGATCGTGGCGGTGCAG GGCGGGCACATTGTGCGGTCGACAGGGCGGAAGGACCGGCACAGCAAGGTCTGCACGGCG CGCGGGCCGCGCGACCGCCGCGTGCGGCTGTCGGCGCACACCGCCATCCAGTTCTACGAC GTGCAGGACCGGCTGGGCTACGACCGCCCGAGCAAGGCGGTGGACTGGCTCATCAAGAAC GCCAAGGACGCCATCGACAAGCTCGACGTGCTGCCGGCGTGGCAGCCCACTGCCGGCGGC GCAGGCGCGGGCAATGCCGCCGCGCCGCCGTCCTCCTCGACCCACCCCGACTCCGCCGAG AACTCCGACGACCAGGCGCAGGCCATCACCGTCGCGCACACCGCCTTCGACTTCGCCGGC GGGGGCAGCGGCGGGACCAGCTTCCTCCCGCCGTCGCTCGACTCGGACGCCATAGCCGAC ACGATCAAGTCCTTCTTCCCCATGGGTGGCACCGCAGGCGGGGAGGCATCGTCGTCCACC ACGGCGGCGCAGTCGTCGGCCATGGGTTTCCAGAGCTACACGCCTGACCTCCTGTCCCGC ACCGGCAGCCAGAGCCAGGAGCTCCGGCTGTCGCTGCAGTCCTTACCAGACCCCATGTTC CACCACCAGCAACATCGCCATGGCGGCGGCGGCGGCGGCGGCAATGGCACCACGCAGCAG GCGCTCTTCTCCGGCGCCGCCAATTACTCGTTCGGCGGCGGAGCCATGTGGGCCACCGAG CAGCAGGCGCAGAACCAGCGCATGCTGCCGTGGAACGTGCCCGACCCCGGCGGCGGCGGC GGCGCCGCCTACCTGTTCAACGTGTCGCAGCAAGCGGCGCATATGCAGGCGGCGGCTGCG GCGCTGGGTGGCCACCAGAGCCAGTTCTTCTTCCAGAGGGGACCCCTTCAGTCCAGTAAC CAGCCCTCCGAGCGAGGATGGCCGGAGACCGTCGAAGCCGACAACCAGATGAGCCACCAC CAAGGAGGGCTGAGCCCCTCCGTGTCGGCGGCCATCGGTTTTGCCGCTCCCGGCATCGGC TTCTCCGGCTTCCGCCTCCCCGCGAGGATACAGGGCGACGAGGAGCACAACGGCGGCGGC GGCGGCAATGGCGACAAGCCGCCGCCGCCGTCGTCTGTCTCCTCGGCTTCTCACCACTGA

Peptide Sequence

PEP ID	Os01t0213800-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:6221640:6224153:-1 gene:Os01g0213800 transcript:Os01t0213800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PROLIFERATING CELL FACTOR 5 description:Similar to Transcription factor PCF5. (Os01t0213800-01)
Sequence	SSLVPHSSPGYGIRRGGWTRIGAATVAAGKKAAGDLDPRHHHHRVTHGGDGGGVGGGGSG GQEEADEQQQQQHDHHRLLQLHHHQGVQQDQEPPPVPVFHLQPASVRQLSGSSAEYALLS PMGDAGGHSHHHQHGFQPQLLSFGGVGHHHHLHQFTAQPQPPAASHTRGRGGGGEIVPAT TTPRSRGGGGGGGGEIVAVQGGHIVRSTGRKDRHSKVCTARGPRDRRVRLSAHTAIQFYD VQDRLGYDRPSKAVDWLIKNAKDAIDKLDVLPAWQPTAGGAGAGNAAAPPSSSTHPDSAE NSDDQAQAITVAHTAFDFAGGGSGGTSFLPPSLDSDAIADTIKSFFPMGGTAGGEASSST TAAQSSAMGFQSYTPDLLSRTGSQSQELRLSLQSLPDPMFHHQQHRHGGGGGGGNGTTQQ ALFSGAANYSFGGGAMWATEQQAQNQRMLPWNVPDPGGGGGAAYLFNVSQQAAHMQAAAA ALGGHQSQFFFQRGPLQSSNQPSERGWPETVEADNQMSHHQGGLSPSVSAAIGFAAPGIG FSGFRLPARIQGDEEHNGGGGGNGDKPPPPSSVSSASHH

Transcript Sequence

Transcript ID	Os01t0213800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:6221640:6224153:-1 gene:Os01g0213800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PROLIFERATING CELL FACTOR 5 description:Similar to Transcription factor PCF5. (Os01t0213800-01)
Sequence	GTCTAGTTTAGTCCCCCACTCCTCTCCTGGTTATGGGATCCGGCGAGGTGGATGGACGCG CATTGGAGCAGCAACAGTAGCGGCGGGGAAGAAGGCGGCGGGGGATCTGGATCCGAGGCA CCACCACCACCGGGTCACCCACGGCGGCGACGGCGGCGGCGTAGGAGGAGGAGGAAGCGG GGGACAGGAGGAGGCAGATGAGCAGCAGCAGCAGCAGCACGACCACCACCGGCTTCTCCA GCTCCACCACCACCAGGGTGTGCAGCAGGACCAAGAACCGCCGCCTGTTCCCGTCTTCCA CCTCCAGCCGGCGTCCGTGAGGCAGCTGTCGGGCTCCTCCGCCGAGTATGCCCTTCTCTC GCCCATGGGCGACGCCGGCGGCCACTCCCACCACCACCAACACGGCTTCCAGCCTCAGCT CCTCTCCTTCGGTGGCGTCGGCCACCACCACCACCTGCATCAGTTCACGGCGCAGCCACA GCCCCCCGCCGCGTCCCACACTCGGGGTCGTGGAGGTGGAGGTGAGATTGTCCCCGCGAC GACAACTCCACGGTCGAGGGGCGGAGGCGGCGGCGGCGGCGGGGAGATCGTGGCGGTGCA GGGCGGGCACATTGTGCGGTCGACAGGGCGGAAGGACCGGCACAGCAAGGTCTGCACGGC GCGCGGGCCGCGCGACCGCCGCGTGCGGCTGTCGGCGCACACCGCCATCCAGTTCTACGA CGTGCAGGACCGGCTGGGCTACGACCGCCCGAGCAAGGCGGTGGACTGGCTCATCAAGAA CGCCAAGGACGCCATCGACAAGCTCGACGTGCTGCCGGCGTGGCAGCCCACTGCCGGCGG CGCAGGCGCGGGCAATGCCGCCGCGCCGCCGTCCTCCTCGACCCACCCCGACTCCGCCGA GAACTCCGACGACCAGGCGCAGGCCATCACCGTCGCGCACACCGCCTTCGACTTCGCCGG CGGGGGCAGCGGCGGGACCAGCTTCCTCCCGCCGTCGCTCGACTCGGACGCCATAGCCGA CACGATCAAGTCCTTCTTCCCCATGGGTGGCACCGCAGGCGGGGAGGCATCGTCGTCCAC CACGGCGGCGCAGTCGTCGGCCATGGGTTTCCAGAGCTACACGCCTGACCTCCTGTCCCG CACCGGCAGCCAGAGCCAGGAGCTCCGGCTGTCGCTGCAGTCCTTACCAGACCCCATGTT CCACCACCAGCAACATCGCCATGGCGGCGGCGGCGGCGGCGGCAATGGCACCACGCAGCA GGCGCTCTTCTCCGGCGCCGCCAATTACTCGTTCGGCGGCGGAGCCATGTGGGCCACCGA GCAGCAGGCGCAGAACCAGCGCATGCTGCCGTGGAACGTGCCCGACCCCGGCGGCGGCGG CGGCGCCGCCTACCTGTTCAACGTGTCGCAGCAAGCGGCGCATATGCAGGCGGCGGCTGC GGCGCTGGGTGGCCACCAGAGCCAGTTCTTCTTCCAGAGGGGACCCCTTCAGTCCAGTAA CCAGCCCTCCGAGCGAGGATGGCCGGAGACCGTCGAAGCCGACAACCAGATGAGCCACCA CCAAGGAGGGCTGAGCCCCTCCGTGTCGGCGGCCATCGGTTTTGCCGCTCCCGGCATCGG CTTCTCCGGCTTCCGCCTCCCCGCGAGGATACAGGGCGACGAGGAGCACAACGGCGGCGG CGGCGGCAATGGCGACAAGCCGCCGCCGCCGTCGTCTGTCTCCTCGGCTTCTCACCACTG ACCGCAGCAGTGGCGAGCAGATGACTTCACCACCACCAATCCACCATGAGCAAACACCAC ACCATGTACCAGACTATCAGCTAGCTCCTCCACTTCCATCACGGAATTGTCGATTGCATT CGGGAGGAGCAAAGTTTGGAGGTAGCACAAGTGCACTACTACTGATGCTACTACATATCG GTTGGTTGGTTGGTTGGTTTTCCATCGATCTCTTCTGCTGCTGCGCATGTCATTGGTTTT TGTTTCAAGAATTCACTCGGAGCTTCTTAGAATTAGGCTTGTGAGAATGCAGCAACACGA TGGCAAGCTTTAGCTTAGCTTAGCAAGCCTCTGTGTCTGTTGGCTGTTGCGTTGCGCTAG GTGTAGTTGATCGATGTAGGTTCGAGCTTGCTTTGCTTTGTTTTGATTTTTACTCTTTTG TTGCTGATGCATGGACATGCTTTTGCTTCCTCCTGTGGGTTCAGGAGCAGTTGCTACTAG ACCGATGTTGTTCTCAAAACTGATAAGTGGGATGGTGATGGATTGGGAGAGGAGCCTATC TTTCATCTTTTCC