Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0212700-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:6172143:6173186:-1 gene:Os01g0212700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to RING-H2 finger protein ATL2K. (Os01t0212700-01)
Sequence	GCAAACGCGAACCAAAACACAAAGCAAACGTCCATCTCCGCAGCTTGCTCCGGCCGCCAA TTACAAGCGCCCCACACCCAGCTGCTTCGCCTTCACGTCCACTTCACCGGAGTTGCCATT TCCAATCCCAAACCAAAGGACTTCATTGGATTGCGAGGGGAGTGGAGTTGCTGTGCTGCT GCTGCCGCTGCCGTCTTCGACGGTGAGAAGCCAAGAAAGAGGCGGACCATGAACACGCCC AACTCGTGGCTGTTCGCAGACAACTCCAAGTACAGCACGCGGGCGCGGCTGCTGTTCATG GGGCTCTCCTTCTCCATCGGCATCCTCTCCTTCCTCGTCTACCTCGCCATCTGGTACACC TGCACCCGCCGCCGCCGGAGCCGTCAGCTCCGCGGCGGCGGCTCGGCGTCCGCGGATCAG GAGGCGCCCGAGGCGAACAGCCACGGCATGAGCGCCGCCGCGATCGCCGCGCTCCCGACG TTCGGGTACGAGGCCTCGGCGGCGGCGGCGGCGGCGCTGGATTGCGCCGTGTGCCTCGGG CAGGTGGACGCCGGCGAGAAGGTGCGGCAGCTGCCCAAGTGCGGGCACCTGTTCCACGCC GAGTGCGTCGACGCCTGGCTGCGCGCGCACTCCACGTGCCCCATGTGCCGCGCCGCCGTC GAAGGCCCCGCCACGGCCGCCATCGCCAAGAAGGCCAGCTCCGGCGGCGGCGCCACCGAC ACGCCCCCCGTCGTGGCACCAGCCCCACCGGCGGCGGCAGAGGCACTGCCACTGCCACCT GTCTAG

Peptide Sequence

PEP ID	Os01t0212700-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:6172143:6173186:-1 gene:Os01g0212700 transcript:Os01t0212700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to RING-H2 finger protein ATL2K. (Os01t0212700-01)
Sequence	ANANQNTKQTSISAACSGRQLQAPHTQLLRLHVHFTGVAISNPKPKDFIGLRGEWSCCAA AAAAVFDGEKPRKRRTMNTPNSWLFADNSKYSTRARLLFMGLSFSIGILSFLVYLAIWYT CTRRRRSRQLRGGGSASADQEAPEANSHGMSAAAIAALPTFGYEASAAAAAALDCAVCLG QVDAGEKVRQLPKCGHLFHAECVDAWLRAHSTCPMCRAAVEGPATAAIAKKASSGGGATD TPPVVAPAPPAAAEALPLPPV

Transcript Sequence

Transcript ID	Os01t0212700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:6172143:6173186:-1 gene:Os01g0212700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to RING-H2 finger protein ATL2K. (Os01t0212700-01)
Sequence	AGCAAACGCGAACCAAAACACAAAGCAAACGTCCATCTCCGCAGCTTGCTCCGGCCGCCA ATTACAAGCGCCCCACACCCAGCTGCTTCGCCTTCACGTCCACTTCACCGGAGTTGCCAT TTCCAATCCCAAACCAAAGGACTTCATTGGATTGCGAGGGGAGTGGAGTTGCTGTGCTGC TGCTGCCGCTGCCGTCTTCGACGGTGAGAAGCCAAGAAAGAGGCGGACCATGAACACGCC CAACTCGTGGCTGTTCGCAGACAACTCCAAGTACAGCACGCGGGCGCGGCTGCTGTTCAT GGGGCTCTCCTTCTCCATCGGCATCCTCTCCTTCCTCGTCTACCTCGCCATCTGGTACAC CTGCACCCGCCGCCGCCGGAGCCGTCAGCTCCGCGGCGGCGGCTCGGCGTCCGCGGATCA GGAGGCGCCCGAGGCGAACAGCCACGGCATGAGCGCCGCCGCGATCGCCGCGCTCCCGAC GTTCGGGTACGAGGCCTCGGCGGCGGCGGCGGCGGCGCTGGATTGCGCCGTGTGCCTCGG GCAGGTGGACGCCGGCGAGAAGGTGCGGCAGCTGCCCAAGTGCGGGCACCTGTTCCACGC CGAGTGCGTCGACGCCTGGCTGCGCGCGCACTCCACGTGCCCCATGTGCCGCGCCGCCGT CGAAGGCCCCGCCACGGCCGCCATCGCCAAGAAGGCCAGCTCCGGCGGCGGCGCCACCGA CACGCCCCCCGTCGTGGCACCAGCCCCACCGGCGGCGGCAGAGGCACTGCCACTGCCACC TGTCTAGCTTGCTGCCTACCAGTCGCCGCCGTACGTGCCTCCGGATGGACCGCCGCGCCC GCCTCGGGAAGCGTCAGCGCATGATTGAGGAAGTAGCTAAAGCTACATGCTACAGTGACG AGACTAGAGTGAAACCTAGCTAGGATCGACGTCGTAGATCGAGAGGCAGCCTAATCAACC AAGATTTTATTCGTTCGTGCTCAAGTAGCTTTGTACGTAGTACGTGTACATACCGTTTTC CTTATTATAGTGATGGGTACTACT