Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0212500-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:6139624:6141644:-1 gene:Os01g0212500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0212500-01)
Sequence

ATGGTGCAGGAGCACGGCGGGAGTAACCACCTGCAGCAGCAGCATCAGCACCAGCTGGCG
AAGTACGGCGGCGGTGTGGCTGGCACCGGCGTGGCGCGGGCGTCGAGGAAGAACAAGCCC
AAGAAGGTGCCCCAGCGCGGCCTCGGCGTGGCGCAGCTGGAGAAGCTCCGGATCGAGGAG
CAGAAGAAGATGGAGGGTGGCGCCGCGTTGTCCTCCCACGGCGCGCTCGGCGGCGGTGAT
GGCGTCCTCGGCCACCTCCCTCCTCCGCCGCCGCCGTCGCTCGCGTTGAGCGCCCTGCAG
TCGAGGTCCGCCGCGGACGGTGGCTTCCCGGCGGCGCTCTGGAGCCCAGTGGATCCCATC
AAACACCCGTACAAGAGGAGCCTGTGCCCACAGCCTCCATCCCCGATGGTGAGCACGGGC
CTGTCGCTGACGGCGTCGGCGCGCCACCCAACGGAGCCCCCTTCAAACCAAATGTACAGC
AGCAGCGGCAGCAGGAGCAGCGCCGCGGCGGCGGAGGAGGAGAGGGAGACGGGCGGCGTG
GACAGGTCATGGCCTTTCATGTTCAAGGGCATGGCCGCCTTCAGGACGACGACGAGCAGA
GCTCCTCCTCTGGTGGCGCCTTTCTCGGCGAGGACGACGACCACCGGCGAGCTGGCAGGG
TTGGCCGATGTTGGTCCTGACCTGAGCAGATACGAGTTCAGAGCAACAAATTATTTCAGT
GCCAATGCAAATTATTCAGACTGGACATCTGACTTTGCTCACTGCAAAAGCAGCAAGGAG
AACGGCCGTGCCAGAGACCCTGCCTTCCTCACCTTGAGCTCACAGCCTCCACACCTCCTC
AAGCAGCCTCATGTGGTGCCATCATACAACGACTTCAGTGCCATGGCATCTCAGGCAACA
ACATTTCATCATCGTCGTCGCAGCCATTCTACAGCTTCCTTCCAGTCGGTCCGGTTCGTT
GCGAAAGGACCTTGA

Peptide Sequence

PEP ID

Os01t0212500-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:6139624:6141644:-1 gene:Os01g0212500 transcript:Os01t0212500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0212500-01)
Sequence

MVQEHGGSNHLQQQHQHQLAKYGGGVAGTGVARASRKNKPKKVPQRGLGVAQLEKLRIEE
QKKMEGGAALSSHGALGGGDGVLGHLPPPPPPSLALSALQSRSAADGGFPAALWSPVDPI
KHPYKRSLCPQPPSPMVSTGLSLTASARHPTEPPSNQMYSSSGSRSSAAAAEEERETGGV
DRSWPFMFKGMAAFRTTTSRAPPLVAPFSARTTTTGELAGLADVGPDLSRYEFRATNYFS
ANANYSDWTSDFAHCKSSKENGRARDPAFLTLSSQPPHLLKQPHVVPSYNDFSAMASQAT
TFHHRRRSHSTASFQSVRFVAKGP

Transcript Sequence

Transcript ID

Os01t0212500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:6139624:6141644:-1 gene:Os01g0212500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0212500-01)
Sequence

GCCTGCCACATCCGTGCTTGCATGCGGCTCAACTCCTCTTGTGTTCCTCCGAGAACCACG
CCTCCATCGATCGATCGTCTGCGATCCTTGTCACGGCTTGAACTGTGATCAAGAAACGCC
TTTCTGATCGATGCGCGGTTGATTGATCTTGGTGCGGACGGAGGGAGAGAGAGAGATGGT
GCAGGAGCACGGCGGGAGTAACCACCTGCAGCAGCAGCATCAGCACCAGCTGGCGAAGTA
CGGCGGCGGTGTGGCTGGCACCGGCGTGGCGCGGGCGTCGAGGAAGAACAAGCCCAAGAA
GGTGCCCCAGCGCGGCCTCGGCGTGGCGCAGCTGGAGAAGCTCCGGATCGAGGAGCAGAA
GAAGATGGAGGGTGGCGCCGCGTTGTCCTCCCACGGCGCGCTCGGCGGCGGTGATGGCGT
CCTCGGCCACCTCCCTCCTCCGCCGCCGCCGTCGCTCGCGTTGAGCGCCCTGCAGTCGAG
GTCCGCCGCGGACGGTGGCTTCCCGGCGGCGCTCTGGAGCCCAGTGGATCCCATCAAACA
CCCGTACAAGAGGAGCCTGTGCCCACAGCCTCCATCCCCGATGGTGAGCACGGGCCTGTC
GCTGACGGCGTCGGCGCGCCACCCAACGGAGCCCCCTTCAAACCAAATGTACAGCAGCAG
CGGCAGCAGGAGCAGCGCCGCGGCGGCGGAGGAGGAGAGGGAGACGGGCGGCGTGGACAG
GTCATGGCCTTTCATGTTCAAGGGCATGGCCGCCTTCAGGACGACGACGAGCAGAGCTCC
TCCTCTGGTGGCGCCTTTCTCGGCGAGGACGACGACCACCGGCGAGCTGGCAGGGTTGGC
CGATGTTGGTCCTGACCTGAGCAGATACGAGTTCAGAGCAACAAATTATTTCAGTGCCAA
TGCAAATTATTCAGACTGGACATCTGACTTTGCTCACTGCAAAAGCAGCAAGGAGAACGG
CCGTGCCAGAGACCCTGCCTTCCTCACCTTGAGCTCACAGCCTCCACACCTCCTCAAGCA
GCCTCATGTGGTGCCATCATACAACGACTTCAGTGCCATGGCATCTCAGGCAACAACATT
TCATCATCGTCGTCGCAGCCATTCTACAGCTTCCTTCCAGTCGGTCCGGTTCGTTGCGAA
AGGACCTTGAGCGAGTGCAAGACCGATGTGTCTGAAGGCGTCGACTTAGAACTGAAGCTA
GGAAATTGCTGAACTGAACTTGTCCTGTTGCTTTCTGAAAAAAAAAAACTGCAATGAGGT
TTACCCAATTACCCTGTTGTGTGAAAAAAAGTAGAAACTTGTTTAGTCAGTAAGACCAGA
TGTATAATCAGTTGCTTCT