Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0212400-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:6134203:6139136:1 gene:Os01g0212400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:EF-hand containing H+/cation exchanger 1, EF-hand containing CAX 1, Na+/Ca2+ Exchanger 1, Sodium/Calcium exchanger 1, Na+/Ca2+ exchanger-like protein 1 description:EF-Hand type domain containing protein. (Os01t0212400-01)
Sequence	ATGGCGACTCGCCGCCGCTCCTTCCCGCTCGTCCCGCTCCTCCTCTTCCTCCTGGCCGCC GCCGCGTACGGACGCCTCATCTCCGACGGCTCGCCGGCCTCGGCGTCCGCCACCTCCCTC CTCTCCAACCCCGTGTCAGCCGTGATACGCCTCACCACCTCCAACTCCGCCTCCGCCTCC TCGCCGCCGGCCGCCGCCCCGGAGGAGAAGTGCGAGCAGTCGTACGGGTTCCTCCCCTGC ACCACCACCGTGCTCGGGAACCTGTTCCTGGTGCTCGCGTATGGGTTCCTCATGTACAAG GCGGCCACCTTCCTGTCGGCCGGCAGTGAGCTGCTGCTCGAGATCATGGGGCCCGGCCTC GTCGGCGGCCTCCTCCTCCCCATCCTCGGCGCCCTCCCCGACGCGCTCCTCGTCCTCGTG TCTGGTCTGTCCGGGAGTAGAGAGACCGCACAAAGTCAGGTCCTGATTGGAATGGGGTTG CTTGCTGGTTCGACCGTCTTTCTTCTCACCCTTCTGTGGGGAACCTGTGTTGTTGTTGGC AAGTGTGACATTGGTCCAAATGGCGTTGCAGTTGATTTACAGAACAACAAGGGCTTCAGC TTGACTGGCACTGGTATTTCAACTGATGTCCAAACCAGCTATGCAGCTCGGATCATGGGG ATTTCTGTTATTCCCTTTATCATTGCTCAATTCCCCAAAATGTTGAAGACCCACCACGGA CAGCGCCTAGCTGTCTTGCTGGCACTTATCGTATCATTCTCGCTTGTGCTTGCCTATTGC CTTTATCAGGTTTTCCAGCCATGGATTCAGAAGAGGAAGCTTGCATACGCAAAACACAAG CATGTGATCTCCGGAATCCTCAGGCATGCCCAAATGGAAGCGCTCGGGCGGCTGCTTAAT GAGGATGGCACACCCAATGAAGATGTCATAAAAAAGTTGTTCCACAAGATTGACATGGAT GAGAGCCAAACCCTGTCCCGTGCTGAGCTTCATGCACTTATCATTGGTATCAACTTTGAG GAGGTTGACTTTGACAAGAATGACGCTGTTGACAAGATCATGGATGACTTTGACACGTCA GGCAATGATATCGTCGAGGAGGCAGAGTTTGTCTCGGGGATGAAGAGATGGCTTAATGAG GCCAAGCGCAGCGTCCCTACCAGTGGTGCCTATTCCAATAAGTTCATCACTGATTACCAT GCGAGAACAAGGCAGGAACACGACCTTCTGGTGGACAGATCTGACGAGACAGTTGAGAGC GTTGAGAACCCTGGCTGGTGCATCACCAAAGCCGTGGGACTCCTGCTTCTCGGCAGTGCC ATTGCTGCTGCATTCGCAGACCCGCTTGTTGATGCTGTCCACAACTTCTCCAACGCCTCG CACATCCCATCCTTCTTCATTTCGTTCATCGCCCTCCCGCTGGCGACCAACTCCAGCGAG GCTGTGTCTGCCATCATCTTCGCTAGCAGGAAGAAGCTACGGACCAGTTCCCTTACTTTC TCTGAGGTATATGGTGGTGTGACCATGAACAACACGCTGTGCTTGGGCGTGTTCTTGGCG CTCATCTACATCAGGAACCTGACATGGGACTTCTCATCGGAGGTGCTCATCATACTGCTC GTCTGTGTCATCATGGGACTCTTCACAAGCTTCAGAACCACATTCCCGCTCTGGACCTGT CTGGTGGCGTACATGCTTTACCCGCTTTCGCTCGTTGTCGTCTACATCCTCGACTTCGTC TTTGGCTGGTCATAA

Peptide Sequence

PEP ID	Os01t0212400-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:6134203:6139136:1 gene:Os01g0212400 transcript:Os01t0212400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:EF-hand containing H+/cation exchanger 1, EF-hand containing CAX 1, Na+/Ca2+ Exchanger 1, Sodium/Calcium exchanger 1, Na+/Ca2+ exchanger-like protein 1 description:EF-Hand type domain containing protein. (Os01t0212400-01)
Sequence	MATRRRSFPLVPLLLFLLAAAAYGRLISDGSPASASATSLLSNPVSAVIRLTTSNSASAS SPPAAAPEEKCEQSYGFLPCTTTVLGNLFLVLAYGFLMYKAATFLSAGSELLLEIMGPGL VGGLLLPILGALPDALLVLVSGLSGSRETAQSQVLIGMGLLAGSTVFLLTLLWGTCVVVG KCDIGPNGVAVDLQNNKGFSLTGTGISTDVQTSYAARIMGISVIPFIIAQFPKMLKTHHG QRLAVLLALIVSFSLVLAYCLYQVFQPWIQKRKLAYAKHKHVISGILRHAQMEALGRLLN EDGTPNEDVIKKLFHKIDMDESQTLSRAELHALIIGINFEEVDFDKNDAVDKIMDDFDTS GNDIVEEAEFVSGMKRWLNEAKRSVPTSGAYSNKFITDYHARTRQEHDLLVDRSDETVES VENPGWCITKAVGLLLLGSAIAAAFADPLVDAVHNFSNASHIPSFFISFIALPLATNSSE AVSAIIFASRKKLRTSSLTFSEVYGGVTMNNTLCLGVFLALIYIRNLTWDFSSEVLIILL VCVIMGLFTSFRTTFPLWTCLVAYMLYPLSLVVVYILDFVFGWS

Transcript Sequence

Transcript ID	Os01t0212400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:6134203:6139136:1 gene:Os01g0212400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:EF-hand containing H+/cation exchanger 1, EF-hand containing CAX 1, Na+/Ca2+ Exchanger 1, Sodium/Calcium exchanger 1, Na+/Ca2+ exchanger-like protein 1 description:EF-Hand type domain containing protein. (Os01t0212400-01)
Sequence	ACCCGAGAAGCCCCTCGCCTCCGGCCGCCTCCCGCAATGGCGACTCGCCGCCGCTCCTTC CCGCTCGTCCCGCTCCTCCTCTTCCTCCTGGCCGCCGCCGCGTACGGACGCCTCATCTCC GACGGCTCGCCGGCCTCGGCGTCCGCCACCTCCCTCCTCTCCAACCCCGTGTCAGCCGTG ATACGCCTCACCACCTCCAACTCCGCCTCCGCCTCCTCGCCGCCGGCCGCCGCCCCGGAG GAGAAGTGCGAGCAGTCGTACGGGTTCCTCCCCTGCACCACCACCGTGCTCGGGAACCTG TTCCTGGTGCTCGCGTATGGGTTCCTCATGTACAAGGCGGCCACCTTCCTGTCGGCCGGC AGTGAGCTGCTGCTCGAGATCATGGGGCCCGGCCTCGTCGGCGGCCTCCTCCTCCCCATC CTCGGCGCCCTCCCCGACGCGCTCCTCGTCCTCGTGTCTGGTCTGTCCGGGAGTAGAGAG ACCGCACAAAGTCAGGTCCTGATTGGAATGGGGTTGCTTGCTGGTTCGACCGTCTTTCTT CTCACCCTTCTGTGGGGAACCTGTGTTGTTGTTGGCAAGTGTGACATTGGTCCAAATGGC GTTGCAGTTGATTTACAGAACAACAAGGGCTTCAGCTTGACTGGCACTGGTATTTCAACT GATGTCCAAACCAGCTATGCAGCTCGGATCATGGGGATTTCTGTTATTCCCTTTATCATT GCTCAATTCCCCAAAATGTTGAAGACCCACCACGGACAGCGCCTAGCTGTCTTGCTGGCA CTTATCGTATCATTCTCGCTTGTGCTTGCCTATTGCCTTTATCAGGTTTTCCAGCCATGG ATTCAGAAGAGGAAGCTTGCATACGCAAAACACAAGCATGTGATCTCCGGAATCCTCAGG CATGCCCAAATGGAAGCGCTCGGGCGGCTGCTTAATGAGGATGGCACACCCAATGAAGAT GTCATAAAAAAGTTGTTCCACAAGATTGACATGGATGAGAGCCAAACCCTGTCCCGTGCT GAGCTTCATGCACTTATCATTGGTATCAACTTTGAGGAGGTTGACTTTGACAAGAATGAC GCTGTTGACAAGATCATGGATGACTTTGACACGTCAGGCAATGATATCGTCGAGGAGGCA GAGTTTGTCTCGGGGATGAAGAGATGGCTTAATGAGGCCAAGCGCAGCGTCCCTACCAGT GGTGCCTATTCCAATAAGTTCATCACTGATTACCATGCGAGAACAAGGCAGGAACACGAC CTTCTGGTGGACAGATCTGACGAGACAGTTGAGAGCGTTGAGAACCCTGGCTGGTGCATC ACCAAAGCCGTGGGACTCCTGCTTCTCGGCAGTGCCATTGCTGCTGCATTCGCAGACCCG CTTGTTGATGCTGTCCACAACTTCTCCAACGCCTCGCACATCCCATCCTTCTTCATTTCG TTCATCGCCCTCCCGCTGGCGACCAACTCCAGCGAGGCTGTGTCTGCCATCATCTTCGCT AGCAGGAAGAAGCTACGGACCAGTTCCCTTACTTTCTCTGAGGTATATGGTGGTGTGACC ATGAACAACACGCTGTGCTTGGGCGTGTTCTTGGCGCTCATCTACATCAGGAACCTGACA TGGGACTTCTCATCGGAGGTGCTCATCATACTGCTCGTCTGTGTCATCATGGGACTCTTC ACAAGCTTCAGAACCACATTCCCGCTCTGGACCTGTCTGGTGGCGTACATGCTTTACCCG CTTTCGCTCGTTGTCGTCTACATCCTCGACTTCGTCTTTGGCTGGTCATAAGCAAATGCT TCTGAACTTCTGCTTCATAAGCTAATGCATCTGAACTCCTGCTTTTGACGGTTACTTTTT CTTCGGTTTGATCTTGTAAATTTATCTCCCTGTAATTTATCTGTCTGCACTTCACGCTGT GCATTGTAACTTGTGCCTATCCTAAGGTTCCCATTTGTTCTAGTTTATCCTGATCTTGAA CAGAGATGAGCATAATATATAAATTGAGAGTTGCCTGAAAGT