Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0210700-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:6017742:6022122:-1 gene:Os01g0210700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SHAKER POTASSIUM CHANNEL 2 description:Similar to Potassium channel (Fragment). (Os01t0210700-01);Inward rectifying shaker-like potassium channel (Os01t0210700-02)
Sequence	ATGGAAACTATTAGCAATATCTTTCACAATGACCCACTCCCACCTCTAGGAGCAAGAGCA AACCAATCTATCAAGCTGAGAAAATTCATTATTTCTCCATATGATTCCCGTTACAGGACC TGGGAGACGTTCTTGCTCGTGCTTGTTGTTTATTCAGCTTGGATCTGCCCATTTGAACTA GCATATCTGAGAAATCTCTCCTGGAAGGTTTCTCTTGTTGACAATATTATTGACAGCTTC TTTGCAATCGATATTATTCTCACATTTTTTCTAGCGTATCTGGATCAAAAGTCATATCTT CTAGTGGATGATCCAAAAAGGATCGTGGCTAGGTTACTTAGCATGCTTCGATTATGGCGT CTCCGGCGCCTCAGTGAATTATTTGCCAGGCTCGAAAAGGATATCCGATTGAATTACTAC TGGATAAGGTGCACCAAACTAATTTCTGTTACACTTTTTGCGGTACATTGTTCAGGATGC TTCAATTATTTAATAGCTGATAGATACCCCAATCCAGCAAGAACATGGATAGGAGCAGCA ATACCAAACTACAGATCACAAAATCTGTGGGTTCGATATGTTACGGCAATTTATTGGTCC ATAACAACACTCACAACAACTGGTTATGGGGATTTGCATGCAGAGAATCAAAGAGAAATG TTATTTAGCATATGCTACATGCTATTTAACCTGGGATTGACAGCATACCTCATAGGTAAC ATGACAAATCTGGTTGTTCAGGGAAGTTGCCGGACCAGGAATTTTAGGGACACAATCCAT GCTGCCTCTCAGTTTGCTGCAAGAAATCAGTTGCCTGGACATATTAAGGACGAAATGCTA TCTCATATCTGCCTAAGATATAAAACAGAGGGGCTGAAACAGAAAGAAACATTGGATAGT CTCCCCAAGGGAATCCGTTCAAGCATAGCGTGCAACTTATTCTTACCTGTTATAGAAAAA GTCTATCTTTTCCATGGTGTCTCATTTACTTGCATGATCCAACTGGTAACTGAAATGGAA GCAGAGTACTACCCACCAAGAGAAGTTGTCATACTCCAAAATGAAGCACCCCGAGATGTT TACATATTAGTTTCGGGAGCAGTGGAAGAGCGGGTAGAGATCGATGGAACAGAAAAGGTC CAGGAAGTACTGTGCAATGGTGAAATATTTGGAGAAATAGGAGTTATCTGCAGCATCCCC CAGCCATGTGCTTTCCATACAATCAAAGTTTCACAACTATTAAGGCTGAACACAGCAGTG CTAAAGAACATTATCAAGGAAAACAGCGATGACAGACGAGTTATTCTGAACAATCTTTCC CAGAAGATGAACCAAGATCACAGGTTCTCTACCGAGGTGATGGAAAAATCTTTACAGATG ATGCATCAACACTTTGGAGAGTACAACAGATGTTCTGCATTGAATCAAGACAATGAGAAG AATGAATTAAAAGCTAATAATGGTCATTCTATGGCTTTAGAATGGAAAAGAGTGACAATA CATATGTATTCACAGAGGAACAAAAGACCGGAGGCACCGCTTGCAAAAGTTATAAATCTA CCAGGATCTCTTGATAAACTTTTCGCCATAGCTTGTCAGAAGTTTAACAATTATCGTCTT ACAAAACTTGTCAATCCAGAATTTGCTGAAATTGATGATATTACAGTAATTCGAGATGGT GATCATCTGTTTTTTATGGAAATTTGA

Peptide Sequence

PEP ID	Os01t0210700-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:6017742:6022122:-1 gene:Os01g0210700 transcript:Os01t0210700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SHAKER POTASSIUM CHANNEL 2 description:Similar to Potassium channel (Fragment). (Os01t0210700-01);Inward rectifying shaker-like potassium channel (Os01t0210700-02)
Sequence	METISNIFHNDPLPPLGARANQSIKLRKFIISPYDSRYRTWETFLLVLVVYSAWICPFEL AYLRNLSWKVSLVDNIIDSFFAIDIILTFFLAYLDQKSYLLVDDPKRIVARLLSMLRLWR LRRLSELFARLEKDIRLNYYWIRCTKLISVTLFAVHCSGCFNYLIADRYPNPARTWIGAA IPNYRSQNLWVRYVTAIYWSITTLTTTGYGDLHAENQREMLFSICYMLFNLGLTAYLIGN MTNLVVQGSCRTRNFRDTIHAASQFAARNQLPGHIKDEMLSHICLRYKTEGLKQKETLDS LPKGIRSSIACNLFLPVIEKVYLFHGVSFTCMIQLVTEMEAEYYPPREVVILQNEAPRDV YILVSGAVEERVEIDGTEKVQEVLCNGEIFGEIGVICSIPQPCAFHTIKVSQLLRLNTAV LKNIIKENSDDRRVILNNLSQKMNQDHRFSTEVMEKSLQMMHQHFGEYNRCSALNQDNEK NELKANNGHSMALEWKRVTIHMYSQRNKRPEAPLAKVINLPGSLDKLFAIACQKFNNYRL TKLVNPEFAEIDDITVIRDGDHLFFMEI

Transcript Sequence

Transcript ID	Os01t0210700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:6017742:6022122:-1 gene:Os01g0210700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SHAKER POTASSIUM CHANNEL 2 description:Similar to Potassium channel (Fragment). (Os01t0210700-01);Inward rectifying shaker-like potassium channel (Os01t0210700-02)
Sequence	CTCAGCTAGTCAAGATTACCTGGCACACTCAGAAATGTACCACCAACATGTCAGTAATAA AAACAGCCTCTAGGAACTAAGATCTCGACTTAGGCACCTCCCACTTCTAACTAGACACTC CAATGGAAACTATTAGCAATATCTTTCACAATGACCCACTCCCACCTCTAGGAGCAAGAG CAAACCAATCTATCAAGCTGAGAAAATTCATTATTTCTCCATATGATTCCCGTTACAGGA CCTGGGAGACGTTCTTGCTCGTGCTTGTTGTTTATTCAGCTTGGATCTGCCCATTTGAAC TAGCATATCTGAGAAATCTCTCCTGGAAGGTTTCTCTTGTTGACAATATTATTGACAGCT TCTTTGCAATCGATATTATTCTCACATTTTTTCTAGCGTATCTGGATCAAAAGTCATATC TTCTAGTGGATGATCCAAAAAGGATCGTGGCTAGGTTACTTAGCATGCTTCGATTATGGC GTCTCCGGCGCCTCAGTGAATTATTTGCCAGGCTCGAAAAGGATATCCGATTGAATTACT ACTGGATAAGGTGCACCAAACTAATTTCTGTTACACTTTTTGCGGTACATTGTTCAGGAT GCTTCAATTATTTAATAGCTGATAGATACCCCAATCCAGCAAGAACATGGATAGGAGCAG CAATACCAAACTACAGATCACAAAATCTGTGGGTTCGATATGTTACGGCAATTTATTGGT CCATAACAACACTCACAACAACTGGTTATGGGGATTTGCATGCAGAGAATCAAAGAGAAA TGTTATTTAGCATATGCTACATGCTATTTAACCTGGGATTGACAGCATACCTCATAGGTA ACATGACAAATCTGGTTGTTCAGGGAAGTTGCCGGACCAGGAATTTTAGGGACACAATCC ATGCTGCCTCTCAGTTTGCTGCAAGAAATCAGTTGCCTGGACATATTAAGGACGAAATGC TATCTCATATCTGCCTAAGATATAAAACAGAGGGGCTGAAACAGAAAGAAACATTGGATA GTCTCCCCAAGGGAATCCGTTCAAGCATAGCGTGCAACTTATTCTTACCTGTTATAGAAA AAGTCTATCTTTTCCATGGTGTCTCATTTACTTGCATGATCCAACTGGTAACTGAAATGG AAGCAGAGTACTACCCACCAAGAGAAGTTGTCATACTCCAAAATGAAGCACCCCGAGATG TTTACATATTAGTTTCGGGAGCAGTGGAAGAGCGGGTAGAGATCGATGGAACAGAAAAGG TCCAGGAAGTACTGTGCAATGGTGAAATATTTGGAGAAATAGGAGTTATCTGCAGCATCC CCCAGCCATGTGCTTTCCATACAATCAAAGTTTCACAACTATTAAGGCTGAACACAGCAG TGCTAAAGAACATTATCAAGGAAAACAGCGATGACAGACGAGTTATTCTGAACAATCTTT CCCAGAAGATGAACCAAGATCACAGGTTCTCTACCGAGGTGATGGAAAAATCTTTACAGA TGATGCATCAACACTTTGGAGAGTACAACAGATGTTCTGCATTGAATCAAGACAATGAGA AGAATGAATTAAAAGCTAATAATGGTCATTCTATGGCTTTAGAATGGAAAAGAGTGACAA TACATATGTATTCACAGAGGAACAAAAGACCGGAGGCACCGCTTGCAAAAGTTATAAATC TACCAGGATCTCTTGATAAACTTTTCGCCATAGCTTGTCAGAAGTTTAACAATTATCGTC TTACAAAACTTGTCAATCCAGAATTTGCTGAAATTGATGATATTACAGTAATTCGAGATG GTGATCATCTGTTTTTTATGGAAATTTGAATAAGGATGCTTGAAATCAGCAACGATGCAA AGAACTGCAGATAGGTATGTAGTATACCTTTCAGAAGGTACCAGATTAAGATAATAGTGA TCACTAATCAGGCATGAGGCGACTTGGCATGATAATCAAGAACATGCCACCTAGGGATGT TTCGAGTTGCAGTCCTGTAGTTACATCTAATTTTACTTTAGAATGTAAATGTAGAATTTT GGAGCAATGTAGTCTCTATTCCGCTTTCAAAATGTTGGATCATGGCAGAGGGCAGCCCTC TATGATCTGTGGAGTTTGTAATGTAGCTATAGTGCAACGAAAGATACTAATATCGTTTAC AGGTACTTTATAGTGTTTCTCCAAGTTTTTTTTGAAATAAATGATGAAACAGACATGC