Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0210600-02
CDS Infomation

cds chromosome:IRGSP-1.0:1:6010862:6011818:-1 gene:Os01g0210600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF538 family protein. (Os01t0210600-02)
Sequence

ATGGGGTCGCAGGCGATAGAGGCGCACAGGGAGGGGGCGGAGGTGTACCACGGGGCGGCG
CTGTGCGCGGAGAAGGCGGTGGAGCTCCTCGCGGAGATCCACATGCCGCTGGGCCTGCTG
CCGCTGGCGGAGATGGAGGAGGTCGGCTACAACCGCGCCACGGGGTTCGTGTGGCTGCGC
CAGAAGAAGGCCATCACCCACACCTTCAAGCAGATCAGCAGGCAGGTCTCGTTCGCCGCC
GAGGTCACCGCCTTCGTCGAGGACCGCCGGATGAAGCGCGTCACCGGGGCCAAGACCAAG
GAGCTCCTCATCTGGGTCTCCCTCTCCGACATGTTCATCGACAAGGACGACGCCTCCAAG
ATCACCTTCAAGACCCCCACCGGCCTCGGGAGGACCTACCCCGTCGACGCCTTCGCCAAG
GAGGACGATGGCAAGGGCAAGGTCCCCGCCGCCGCAGCAGCGGCCAACGGCAAGGAGACC
GCCGTCAACGGCAAGGCCAAGTGA

Peptide Sequence

PEP ID

Os01t0210600-02
PEP Infomation

pep chromosome:IRGSP-1.0:1:6010862:6011818:-1 gene:Os01g0210600 transcript:Os01t0210600-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF538 family protein. (Os01t0210600-02)
Sequence

MGSQAIEAHREGAEVYHGAALCAEKAVELLAEIHMPLGLLPLAEMEEVGYNRATGFVWLR
QKKAITHTFKQISRQVSFAAEVTAFVEDRRMKRVTGAKTKELLIWVSLSDMFIDKDDASK
ITFKTPTGLGRTYPVDAFAKEDDGKGKVPAAAAAANGKETAVNGKAK

Transcript Sequence

Transcript ID

Os01t0210600-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:6010862:6011818:-1 gene:Os01g0210600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF538 family protein. (Os01t0210600-02)
Sequence

AACGCAACCCAAAGATTCCCAGTATCCCACCACCGCATTGTGCATTTGTGAATTGTGAGT
GTCGAATCCAAGAGTTGGAGTTCGTGTTCGATGGGGTCGCAGGCGATAGAGGCGCACAGG
GAGGGGGCGGAGGTGTACCACGGGGCGGCGCTGTGCGCGGAGAAGGCGGTGGAGCTCCTC
GCGGAGATCCACATGCCGCTGGGCCTGCTGCCGCTGGCGGAGATGGAGGAGGTCGGCTAC
AACCGCGCCACGGGGTTCGTGTGGCTGCGCCAGAAGAAGGCCATCACCCACACCTTCAAG
CAGATCAGCAGGCAGGTCTCGTTCGCCGCCGAGGTCACCGCCTTCGTCGAGGACCGCCGG
ATGAAGCGCGTCACCGGGGCCAAGACCAAGGAGCTCCTCATCTGGGTCTCCCTCTCCGAC
ATGTTCATCGACAAGGACGACGCCTCCAAGATCACCTTCAAGACCCCCACCGGCCTCGGG
AGGACCTACCCCGTCGACGCCTTCGCCAAGGAGGACGATGGCAAGGGCAAGGTCCCCGCC
GCCGCAGCAGCGGCCAACGGCAAGGAGACCGCCGTCAACGGCAAGGCCAAGTGAGGGTGA
CGCGGGTTTCTTGCGGGGTTTAAGGTTAACTACCCTCTTAATTGATATACTTAGTCTTCT
AAATAAAATCACGGCTGCTGTATTACTACTACTACTCTGCTCCGGTTTTTCACCGAGAGC
GTTATACTCGTGTGTCACCTATCCTATTTTTTTGTCTGTTTTATCAAGCGGGGATTAATC
TTGTGAACCTTACAGTAGCATCACGAGAAGTAGATGACTACCTGAACGATGTTCATGATT
TTAGACTTGAAAATCTTCTCTTGGCCGTAATTATAATTCCTACTCCATCTACAGTTGTAT
TCGCAGACAAGAGTAGCTGTCGTATTTAAACATGTTGCTGGTGAGAAATTTATGGCT