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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0210500-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:6007921:6009027:-1 gene:Os01g0210500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to SOUL-like protein. (Os01t0210500-01)
Sequence

ATGGCTCGCCGGAGCGGCCTAATGCTACTACTCCTCGCCGCCGCCGCTGTCGCCTCCGCG
GCCGTGCCGCCGTCGTGCGAGCGCATCGAGTGCCCGTCGTACGAGGTGGTGGACAGCGCC
AACGGGTTCGAGATCCGGCGGTACAGCGACGCCATGTGGGCTTCCACCGCCCCCATCGAG
GACATCTCCTTCGTCGCCGCCACCCGCACCGGCTTCCTCCAGTTGTTCAACTACATCCAG
GGGAAGAACGCGTACAACGAGACGATCGAGATGACGGCGCCGGTGCTGACGCAGGTGGCG
CCGAGCGACGGGCCGTTCTGCGTCTCCTCCTTCGTGGTCAGCTTCTACGTGCCGGCGAAG
AACCAGCCGGACCCGCCGCCGGCGGAGGGGCTGCACGTGCAGAGGTGGGCCGGGGCCAGG
TACGCCGCTGTGCGCCGCTTCGGCGGCTTCGTGGCCGACTCCGACGTCGGCGAGCAGGCC
GCGCTGCTCGACGCCAGCCTGCAGGGGACCAGGTGGGCCGCCGCCGTGTCCGACGGGCGC
AGGGCCGACCCGACGTCGTCGTACACGGTGGCGCAGTACAACTCGCCGTTCGAGTTCAGC
GGCAGGGTCAACGAGATATGGATGCTCTTCGACGCGAAGGATGCATCCGACATGTAA

Peptide Sequence

PEP ID

Os01t0210500-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:6007921:6009027:-1 gene:Os01g0210500 transcript:Os01t0210500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to SOUL-like protein. (Os01t0210500-01)
Sequence

MARRSGLMLLLLAAAAVASAAVPPSCERIECPSYEVVDSANGFEIRRYSDAMWASTAPIE
DISFVAATRTGFLQLFNYIQGKNAYNETIEMTAPVLTQVAPSDGPFCVSSFVVSFYVPAK
NQPDPPPAEGLHVQRWAGARYAAVRRFGGFVADSDVGEQAALLDASLQGTRWAAAVSDGR
RADPTSSYTVAQYNSPFEFSGRVNEIWMLFDAKDASDM

Transcript Sequence

Transcript ID

Os01t0210500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:6007921:6009027:-1 gene:Os01g0210500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to SOUL-like protein. (Os01t0210500-01)
Sequence

CCCCAACCGCACGCACCCGAGCCCCACTGCAATCCCACCTCCCCAACTCCGCCGCACGCA
TCCCCGCACCCGCCACCATGGCTCGCCGGAGCGGCCTAATGCTACTACTCCTCGCCGCCG
CCGCTGTCGCCTCCGCGGCCGTGCCGCCGTCGTGCGAGCGCATCGAGTGCCCGTCGTACG
AGGTGGTGGACAGCGCCAACGGGTTCGAGATCCGGCGGTACAGCGACGCCATGTGGGCTT
CCACCGCCCCCATCGAGGACATCTCCTTCGTCGCCGCCACCCGCACCGGCTTCCTCCAGT
TGTTCAACTACATCCAGGGGAAGAACGCGTACAACGAGACGATCGAGATGACGGCGCCGG
TGCTGACGCAGGTGGCGCCGAGCGACGGGCCGTTCTGCGTCTCCTCCTTCGTGGTCAGCT
TCTACGTGCCGGCGAAGAACCAGCCGGACCCGCCGCCGGCGGAGGGGCTGCACGTGCAGA
GGTGGGCCGGGGCCAGGTACGCCGCTGTGCGCCGCTTCGGCGGCTTCGTGGCCGACTCCG
ACGTCGGCGAGCAGGCCGCGCTGCTCGACGCCAGCCTGCAGGGGACCAGGTGGGCCGCCG
CCGTGTCCGACGGGCGCAGGGCCGACCCGACGTCGTCGTACACGGTGGCGCAGTACAACT
CGCCGTTCGAGTTCAGCGGCAGGGTCAACGAGATATGGATGCTCTTCGACGCGAAGGATG
CATCCGACATGTAACGCGATGAGCGCGCGGCAATTCCAAATCTTCAAATGTTCACCGGAG
TAGTAGACTCGATCGCACAGCTAGTGTAATCTTCAAGCTCCTGGTCGGAAGAATAATGGC
ATCTTAAAGCCCTAAACTGCTCGAGTGAACTGTTTTTTTGCACTGTAAAGTATGTAGTTG
AGTTGTGACTCGTGCGTATCGAGATTAACAACAATAAAAGTTCTGTTTAGTC