Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0209800-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:5983626:5985833:-1 gene:Os01g0209800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cationic amino acid transporter 1 description:Similar to Cationic amino acid transporter (Fragment). (Os01t0209800-01);Similar to Cationic amino acid transporter (Fragment). (Os01t0209800-02)
Sequence	ATGGCGGCCGTCGATACGCCGGAGAAGCCGTACGAGGGTAAGCCGGCGGCGGAGGCGAGG AGCTACTGGCGGTGGCAGAAGGAAGATTTCTTCCCGGAGCCGTCCTTCGCGAGCTGGGGC GCGTACCGCGCGGCGCTGGCCGCGACGCCCGCGCGGTTCCGCGACCGCTTCGCCGGCCGC TCCACCGACGCCGACGAGCTCGGCGCGCTGCGCCGCCGCAGCGAGAACGAGATGCGCCGC TGCCTCACGTGGTGGGACCTCACGTGGTTCGGGTTCGGCTCCGTCATCGGTGCCGGGATC TTCGTGCTCACCGGCCAGGAGGCGCACGACCACGCCGGCCCGGCCATCGTGCTCTCCTAC GTGGCCTCCGGCCTCTCCGCCATGCTGTCCGTGTTCTGCTACACGGAGTTCGCCGTCGAG ATCCCCGTGGCCGGCGGCTCCTTCGCCTACCTCCGCGTCGAGCTCGGCGACGTGGCGGCC TTCATCGCCGCCGCGAACCTCATCCTCGAGAGCATCATCGGCACGGCCGCGGTGGCGCGC TCCTGGACGTCGTACCTCGCGTCGCTCATCAACAAGCCGGCGAGCGCGCTGCGCATACAG ACGTCGCTCGCCGAGGGGTACAACGAGCTGGACCCCATCGCGGTGGTGGTGATCGCGGTC ACGGCGACCCTGGCCATTCTGAGCGCCAAGGGCACCTCCCGCGTCAACTGGGTCGCCTCC GCCGTGCACGTCCTCGTGATAGCCTTCGTCATCGTGGCCGGCTTCCTCCACGCGAAGACC AGCAACCTGACCCCGTTCATGCCGCACGGCGTGCCGGGCGTGTTCCGCGCGGCGGCGATC GTCTACTTCGCCTACGGCGGGTTCGACAACATCGCGACCATGGCGGAGGAGACCAAGAAC CCATCGAGAGACATCCCTCTCGGGCTTCTCGGCTCCATGTCGGTGATCACGGCCATCTAC TGCGTGATGGCGCTGGTGCTGAGCATGATGCAGCCGTACACGGCGATCGACCGGAGCGCG GCGTACTCGGTGGCGTTCAGCAACGTCGGGATGCGGTGGGCGCAGTACGTGGTGGCGCTC GGCGCGCTCAAGGGGATGACGACGGTGCTGCTGGTCGGGGCGCTCGGTCAGGCTCGGTAC ACCACGCACATCGCGCGCAGCCACATCATCCCGCCGGTGTTCGCGCTGGTGCACCCCAGG ACCGGCACGCCGGTGCACGCCACCGTGCTCATCGCCGCCGCCGGCGCCTGCATCGGCCTC TTCTCCAGCCTCGACGTGCTCTCCAGCCTCCTCTCCGTCAGCACGCTCTTCATCTTCATG ATGATGGCCACCGCCCTCCTCGTCCGCCGGTACTACGTGCGGGGCGTGACGAGCAGGACG CACGCGAGGCGGCTGGTGGCGTTGCTATCGGTGGTCATCGGCTCGTCGGCGGGCATCGCG GCGTACTGGGGCGCGGCGCCGGAGCGGTGGGTTGGGTACACCGTGCTGGTGCCGGCGTGG GCGGCGGGCACGCTCGGCATCCAGCTTCTGGTGCCGGCGGCGCGCGCGCCCAAGGTGTGG GGCGTGCCGCTCGTGCCGTGGCTGCCGTCGCTGTCCATCGCCACCAACCTCTTCCTCATG GGCTCGCTCGGCGCGCAGGCGTTCATCCGCTTCGGCGTCTGCACCGCCATCATGCTGCTC TACTACGTGCTCGTCGGGCTGCACGCCACCTACGACGTCGCGCACGGCGCGTGCTCCGGC GACGACGTCGACGAGGAGGTCTACGCTGATGCCGCCCACGTGGACGATGCGAAGGCGGCG GCCGCGGTCGCTGCCAACGCAGACGTGGAGAGGGCGGGCGCGAAGATCTGA

Peptide Sequence

PEP ID	Os01t0209800-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:5983626:5985833:-1 gene:Os01g0209800 transcript:Os01t0209800-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cationic amino acid transporter 1 description:Similar to Cationic amino acid transporter (Fragment). (Os01t0209800-01);Similar to Cationic amino acid transporter (Fragment). (Os01t0209800-02)
Sequence	MAAVDTPEKPYEGKPAAEARSYWRWQKEDFFPEPSFASWGAYRAALAATPARFRDRFAGR STDADELGALRRRSENEMRRCLTWWDLTWFGFGSVIGAGIFVLTGQEAHDHAGPAIVLSY VASGLSAMLSVFCYTEFAVEIPVAGGSFAYLRVELGDVAAFIAAANLILESIIGTAAVAR SWTSYLASLINKPASALRIQTSLAEGYNELDPIAVVVIAVTATLAILSAKGTSRVNWVAS AVHVLVIAFVIVAGFLHAKTSNLTPFMPHGVPGVFRAAAIVYFAYGGFDNIATMAEETKN PSRDIPLGLLGSMSVITAIYCVMALVLSMMQPYTAIDRSAAYSVAFSNVGMRWAQYVVAL GALKGMTTVLLVGALGQARYTTHIARSHIIPPVFALVHPRTGTPVHATVLIAAAGACIGL FSSLDVLSSLLSVSTLFIFMMMATALLVRRYYVRGVTSRTHARRLVALLSVVIGSSAGIA AYWGAAPERWVGYTVLVPAWAAGTLGIQLLVPAARAPKVWGVPLVPWLPSLSIATNLFLM GSLGAQAFIRFGVCTAIMLLYYVLVGLHATYDVAHGACSGDDVDEEVYADAAHVDDAKAA AAVAANADVERAGAKI

Transcript Sequence

Transcript ID	Os01t0209800-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:5983626:5985833:-1 gene:Os01g0209800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cationic amino acid transporter 1 description:Similar to Cationic amino acid transporter (Fragment). (Os01t0209800-01);Similar to Cationic amino acid transporter (Fragment). (Os01t0209800-02)
Sequence	ACACTCCACCAGTTGTCCAGTTCACCACCAAAGCTGTGGTCGATCCCCTCCACACGAAGA TATGGCGGCCGTCGATACGCCGGAGAAGCCGTACGAGGGTAAGCCGGCGGCGGAGGCGAG GAGCTACTGGCGGTGGCAGAAGGAAGATTTCTTCCCGGAGCCGTCCTTCGCGAGCTGGGG CGCGTACCGCGCGGCGCTGGCCGCGACGCCCGCGCGGTTCCGCGACCGCTTCGCCGGCCG CTCCACCGACGCCGACGAGCTCGGCGCGCTGCGCCGCCGCAGCGAGAACGAGATGCGCCG CTGCCTCACGTGGTGGGACCTCACGTGGTTCGGGTTCGGCTCCGTCATCGGTGCCGGGAT CTTCGTGCTCACCGGCCAGGAGGCGCACGACCACGCCGGCCCGGCCATCGTGCTCTCCTA CGTGGCCTCCGGCCTCTCCGCCATGCTGTCCGTGTTCTGCTACACGGAGTTCGCCGTCGA GATCCCCGTGGCCGGCGGCTCCTTCGCCTACCTCCGCGTCGAGCTCGGCGACGTGGCGGC CTTCATCGCCGCCGCGAACCTCATCCTCGAGAGCATCATCGGCACGGCCGCGGTGGCGCG CTCCTGGACGTCGTACCTCGCGTCGCTCATCAACAAGCCGGCGAGCGCGCTGCGCATACA GACGTCGCTCGCCGAGGGGTACAACGAGCTGGACCCCATCGCGGTGGTGGTGATCGCGGT CACGGCGACCCTGGCCATTCTGAGCGCCAAGGGCACCTCCCGCGTCAACTGGGTCGCCTC CGCCGTGCACGTCCTCGTGATAGCCTTCGTCATCGTGGCCGGCTTCCTCCACGCGAAGAC CAGCAACCTGACCCCGTTCATGCCGCACGGCGTGCCGGGCGTGTTCCGCGCGGCGGCGAT CGTCTACTTCGCCTACGGCGGGTTCGACAACATCGCGACCATGGCGGAGGAGACCAAGAA CCCATCGAGAGACATCCCTCTCGGGCTTCTCGGCTCCATGTCGGTGATCACGGCCATCTA CTGCGTGATGGCGCTGGTGCTGAGCATGATGCAGCCGTACACGGCGATCGACCGGAGCGC GGCGTACTCGGTGGCGTTCAGCAACGTCGGGATGCGGTGGGCGCAGTACGTGGTGGCGCT CGGCGCGCTCAAGGGGATGACGACGGTGCTGCTGGTCGGGGCGCTCGGTCAGGCTCGGTA CACCACGCACATCGCGCGCAGCCACATCATCCCGCCGGTGTTCGCGCTGGTGCACCCCAG GACCGGCACGCCGGTGCACGCCACCGTGCTCATCGCCGCCGCCGGCGCCTGCATCGGCCT CTTCTCCAGCCTCGACGTGCTCTCCAGCCTCCTCTCCGTCAGCACGCTCTTCATCTTCAT GATGATGGCCACCGCCCTCCTCGTCCGCCGGTACTACGTGCGGGGCGTGACGAGCAGGAC GCACGCGAGGCGGCTGGTGGCGTTGCTATCGGTGGTCATCGGCTCGTCGGCGGGCATCGC GGCGTACTGGGGCGCGGCGCCGGAGCGGTGGGTTGGGTACACCGTGCTGGTGCCGGCGTG GGCGGCGGGCACGCTCGGCATCCAGCTTCTGGTGCCGGCGGCGCGCGCGCCCAAGGTGTG GGGCGTGCCGCTCGTGCCGTGGCTGCCGTCGCTGTCCATCGCCACCAACCTCTTCCTCAT GGGCTCGCTCGGCGCGCAGGCGTTCATCCGCTTCGGCGTCTGCACCGCCATCATGCTGCT CTACTACGTGCTCGTCGGGCTGCACGCCACCTACGACGTCGCGCACGGCGCGTGCTCCGG CGACGACGTCGACGAGGAGGTCTACGCTGATGCCGCCCACGTGGACGATGCGAAGGCGGC GGCCGCGGTCGCTGCCAACGCAGACGTGGAGAGGGCGGGCGCGAAGATCTGATCACATGC CTAATGATTTGGTACATTGATGCGAAGAATATTCAAAACTGTAGCGTGCAACTGCAAATA TCATTATCTATTGAACAGTATCTCACCAAAGTGGGAAATGGATTCTCTTTGGAGGGATAG GGATATCCCCTCCGTCTGTCGTGTCATGTAAATAGTTATGAAAATAATTGAAAAACAAAC ATATACTATCTC