Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0206800-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:5814827:5819207:-1 gene:Os01g0206800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase, core domain containing protein. (Os01t0206800-01)
Sequence	ATGGGTGCGCGGTGGGGGCCTCGCCGCGCCACCGTCGGGCCCCACCTCCGCGACGCGCTG CGTCACCTGCTCTTCGTCTTCCTCGTGCTGCTCCAGGCGCAGGCGGGGCGCGGCGGCGCC ACGCTCAACGGCGAAGGAATGGCGTTGCTCGAGCTGAGGGAGAGGGTGGAGGCTGACCCC CATGGCGCCTTGCGGGATTGGGATCCGGCAGACGCCACGCCCTGCAGATGGTCCGGCGTG CATTGCTTTGACGGTAAAGTTGAGATTTTGAACTTAACAGGCCGAGAATTGGTGGGAACT CTCGCACCTGAGATTGGACGTCTTCAACTTTTGAAATCTCTCATTCTTCGAAACAACAAT TTCCGTGGGAAAATTCCCAAAGAGTTCGGAGGGTTAACTGCCCTTGAAGTACTGGATTTG AGCAGCAACAACTTGGATGGAACGATTCCAGAAGAATTAATGGCAATGCCACTGCTCAAG CAGCTGTCACTTCATGACAATCAGTTCCAAGATGATATCTCTTCTTTGCACATTCAAGAT ATATCTGATGAGCAGGCAGGATGCTTGAGCAGAAAATTAGGTTGCTGGGCGGGGTTTAAG GATTGGACTTCTTTCAGTGATCTCCGAGAGAAATACTCCACCAACCTAGCAAGTAACCGC ACATTCAAAAGTCTAGGCGAGCCACACATTATGCAAAATTTGCAGTCCTTTGCAAGTGCC GTGGGCCGCAGGCTGCTCGGTGAAGTTGGCAATCTGCCTGCCCTTTCAGGGAATTATGCT AAATCTTCTGGCCCTGTAAATTCAGAAGAGATCCAAAGGGCTATTGATGTTCTCTCTTTA GGGAGTGGTTCATTCTCTGCATTCCCAAATTCAGAGGCCGAAGTTCTGGAATCAGCTGTA AATACTGATGCTGCTGCAATGCAGTCTGGAGCAGCAAATCAATCAACCGATGAAGTGTCT GGTTCAAAGCACAGCAAGTGGGCATATTTTATGATAATTCCAGCTGCAATATTGCTGATT AGCCTGATTGTGGCTCCAATCTTGGTCTGGCGGAAGCGAGGGCGTGCGGCAATAGGACCT TGGAAAACGGGTCTAAGTGGCCCACTTCAGAAAGCATTTGTAACAGGTGTTCCAAAGCTA AACAGACCTGAACTCGAAGCCGCTTGTGAGGATTTCAGTAACATAATCAACACTTTCCCT AGCTGCACCGTGTTCAAAGGGACATTATCTAGCGGAGTTGAGATCAGTGTTGTTTCCACT GCCATTTTGTCGCTCAAAGAGTGGCCTAAGAGTTCAGAGACATGCTTCAGAAAACAGATA GACACACTATCAAGAGTAAACCACAAGAATTTCATCAACCTCCTAGGTTATTGCCTGGAA AATCAACCCTTCATGAGAATGATGGTGTTCGAGTATGCTCCAAATGGCACTCTCTCTGAG CATCTCCACCTCAAAGAATTTGAGCATCTGGACTGGGCTGCAAGGATGAGGATCATCATG GGTGTGGCATACTGTCTCCAATACATGCACCATGATCTCAATCCACCTGTTGCGATAACC GACATGCGCTCCGACACAATTTTCATGACAGATGATTATGCTGCCAAGATTGCTGATGTT GGTATCTGGAAAGAAGTCGCCATAAAAGCAAAGACTGCAAAGGAGGATAGCAGCAGCCGT TCTGAATGTCCTCCTGATATCGCGAGCAACGTCTACTGCTTTGGCACGCTTCTGATAGAG ATCATATCCGGAAAGCTCCCTGAAGCAGACGACCAAAAATCCATGTGCAACTGGGCCGCT GAGTATCTGAAGGGCAAGAGCTACAGCAAGCTCGTCGACGCGTCGCTGAAGGAACACAAC GCCAACGAGCTGGAGGCCGTCTGCGAGGTGATTCAGGAGTGCATTGATCCCGACTCAGAT CAGAGGCCGACGATGAGAGACGCCACCCGCAAGCTGAGACAAGCTCTCAACATCTCGCCG GAGGCAGCGACGCCGCGGCTCTCGCCTCTCTGGTGGGCTGAGCTCGAGATACTCTCTGCA GAGGCAACCTAG

Peptide Sequence

PEP ID	Os01t0206800-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:5814827:5819207:-1 gene:Os01g0206800 transcript:Os01t0206800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase, core domain containing protein. (Os01t0206800-01)
Sequence	MGARWGPRRATVGPHLRDALRHLLFVFLVLLQAQAGRGGATLNGEGMALLELRERVEADP HGALRDWDPADATPCRWSGVHCFDGKVEILNLTGRELVGTLAPEIGRLQLLKSLILRNNN FRGKIPKEFGGLTALEVLDLSSNNLDGTIPEELMAMPLLKQLSLHDNQFQDDISSLHIQD ISDEQAGCLSRKLGCWAGFKDWTSFSDLREKYSTNLASNRTFKSLGEPHIMQNLQSFASA VGRRLLGEVGNLPALSGNYAKSSGPVNSEEIQRAIDVLSLGSGSFSAFPNSEAEVLESAV NTDAAAMQSGAANQSTDEVSGSKHSKWAYFMIIPAAILLISLIVAPILVWRKRGRAAIGP WKTGLSGPLQKAFVTGVPKLNRPELEAACEDFSNIINTFPSCTVFKGTLSSGVEISVVST AILSLKEWPKSSETCFRKQIDTLSRVNHKNFINLLGYCLENQPFMRMMVFEYAPNGTLSE HLHLKEFEHLDWAARMRIIMGVAYCLQYMHHDLNPPVAITDMRSDTIFMTDDYAAKIADV GIWKEVAIKAKTAKEDSSSRSECPPDIASNVYCFGTLLIEIISGKLPEADDQKSMCNWAA EYLKGKSYSKLVDASLKEHNANELEAVCEVIQECIDPDSDQRPTMRDATRKLRQALNISP EAATPRLSPLWWAELEILSAEAT

Transcript Sequence

Transcript ID	Os01t0206800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:5814827:5819207:-1 gene:Os01g0206800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein kinase, core domain containing protein. (Os01t0206800-01)
Sequence	CGCGCGAAATCCCCCCCACCACCCCCTTCGCGCCGCCGCCCTCGTCGTCGTCCGACCACC CGATCCCGACGAGAACCCGTCCACGTCCATCTCCGCCGCTGACAGCACCAGCTCTTCGCC GACGCCGCCGCTGAGACACCGTCCCGGCGCGGGCGAGGCGACCCATGGGATCCTCCGGCG GATAGCTCGGCCTCCCTCGGGGCTTTGCCGGGCTAAGCCAGCGCCCGCGGCGTCGTGTCG TCGTCGTCGTCGTCGTCGTCGTCGTCCTCTTGTGATCTTGTTTTCCCGGCGTCGTGACGA GGCCGGAGAGGAAGAGATCGACCGGAGCCAGCGCCTCTGCTCGCCGCGGTTGTTTCGCTA AGCTTCGTCTGGTTCTTGATTCCCTCCCCCACATTCTCGGCCGGAAGAGGGCGGCGGCAG CGGCGGGTGGCCGCCGGGCTGCCATTGTCCGGGAGGCGCTCCTCCCCCGTCGCCATGGGT GCGCGGTGGGGGCCTCGCCGCGCCACCGTCGGGCCCCACCTCCGCGACGCGCTGCGTCAC CTGCTCTTCGTCTTCCTCGTGCTGCTCCAGGCGCAGGCGGGGCGCGGCGGCGCCACGCTC AACGGCGAAGGAATGGCGTTGCTCGAGCTGAGGGAGAGGGTGGAGGCTGACCCCCATGGC GCCTTGCGGGATTGGGATCCGGCAGACGCCACGCCCTGCAGATGGTCCGGCGTGCATTGC TTTGACGGTAAAGTTGAGATTTTGAACTTAACAGGCCGAGAATTGGTGGGAACTCTCGCA CCTGAGATTGGACGTCTTCAACTTTTGAAATCTCTCATTCTTCGAAACAACAATTTCCGT GGGAAAATTCCCAAAGAGTTCGGAGGGTTAACTGCCCTTGAAGTACTGGATTTGAGCAGC AACAACTTGGATGGAACGATTCCAGAAGAATTAATGGCAATGCCACTGCTCAAGCAGCTG TCACTTCATGACAATCAGTTCCAAGATGATATCTCTTCTTTGCACATTCAAGATATATCT GATGAGCAGGCAGGATGCTTGAGCAGAAAATTAGGTTGCTGGGCGGGGTTTAAGGATTGG ACTTCTTTCAGTGATCTCCGAGAGAAATACTCCACCAACCTAGCAAGTAACCGCACATTC AAAAGTCTAGGCGAGCCACACATTATGCAAAATTTGCAGTCCTTTGCAAGTGCCGTGGGC CGCAGGCTGCTCGGTGAAGTTGGCAATCTGCCTGCCCTTTCAGGGAATTATGCTAAATCT TCTGGCCCTGTAAATTCAGAAGAGATCCAAAGGGCTATTGATGTTCTCTCTTTAGGGAGT GGTTCATTCTCTGCATTCCCAAATTCAGAGGCCGAAGTTCTGGAATCAGCTGTAAATACT GATGCTGCTGCAATGCAGTCTGGAGCAGCAAATCAATCAACCGATGAAGTGTCTGGTTCA AAGCACAGCAAGTGGGCATATTTTATGATAATTCCAGCTGCAATATTGCTGATTAGCCTG ATTGTGGCTCCAATCTTGGTCTGGCGGAAGCGAGGGCGTGCGGCAATAGGACCTTGGAAA ACGGGTCTAAGTGGCCCACTTCAGAAAGCATTTGTAACAGGTGTTCCAAAGCTAAACAGA CCTGAACTCGAAGCCGCTTGTGAGGATTTCAGTAACATAATCAACACTTTCCCTAGCTGC ACCGTGTTCAAAGGGACATTATCTAGCGGAGTTGAGATCAGTGTTGTTTCCACTGCCATT TTGTCGCTCAAAGAGTGGCCTAAGAGTTCAGAGACATGCTTCAGAAAACAGATAGACACA CTATCAAGAGTAAACCACAAGAATTTCATCAACCTCCTAGGTTATTGCCTGGAAAATCAA CCCTTCATGAGAATGATGGTGTTCGAGTATGCTCCAAATGGCACTCTCTCTGAGCATCTC CACCTCAAAGAATTTGAGCATCTGGACTGGGCTGCAAGGATGAGGATCATCATGGGTGTG GCATACTGTCTCCAATACATGCACCATGATCTCAATCCACCTGTTGCGATAACCGACATG CGCTCCGACACAATTTTCATGACAGATGATTATGCTGCCAAGATTGCTGATGTTGGTATC TGGAAAGAAGTCGCCATAAAAGCAAAGACTGCAAAGGAGGATAGCAGCAGCCGTTCTGAA TGTCCTCCTGATATCGCGAGCAACGTCTACTGCTTTGGCACGCTTCTGATAGAGATCATA TCCGGAAAGCTCCCTGAAGCAGACGACCAAAAATCCATGTGCAACTGGGCCGCTGAGTAT CTGAAGGGCAAGAGCTACAGCAAGCTCGTCGACGCGTCGCTGAAGGAACACAACGCCAAC GAGCTGGAGGCCGTCTGCGAGGTGATTCAGGAGTGCATTGATCCCGACTCAGATCAGAGG CCGACGATGAGAGACGCCACCCGCAAGCTGAGACAAGCTCTCAACATCTCGCCGGAGGCA GCGACGCCGCGGCTCTCGCCTCTCTGGTGGGCTGAGCTCGAGATACTCTCTGCAGAGGCA ACCTAGTAGATTGATCAGTGATGTATACTGTTGCTGGTGAACCAATACTCGCGGCAGCAT CCCTCTTCACAAGGCTAAAGGAAAAAGCCTGTTTATGTGCAGAATTCATGTTCTTGATCC TATGAAAAAAAATGTCGTGTGACAGATGTGCAACTATTGGGTCTAATGTGCATTGATCTT TACACAAGAATGGAATGTGATTTGTATGAATATTTATAAGTTTGATCAGTGTAAAAATCA AGCAAGTTCGCTGCTGTTATTCCATT