Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0206700-03
CDS Infomation	cds chromosome:IRGSP-1.0:1:5809589:5811389:-1 gene:Os01g0206700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CALCINEURIN B-LIKE PROTEIN-INTERACTING PROTEIN KINASE 5 description:Similar to Serine/threonine protein kinase (CBL-interacting protein kinase 20). (Os01t0206700-01);Similar to cDNA clone:J013031K24, full insert sequence. (Os01t0206700-02);Similar to Serine/threonine protein kinase (CBL-interacting protein kinase 20). (Os01t0206700-03)
Sequence	ATGGAGAAGAAGGCGTCCATCCTCATGAACCGGTATGAGCTCGGCCGCATGCTCGGGCAA GGCACCTTCGCCAAGGTGTACCATGCACGGAACCTTGCATCCAACCAGAGCGTCGCCATC AAGGTCATTGACAAGGAAAAGGTATTGCGTGTCGGCATGATTGACCAGATCAAGCGAGAG ATCTCCATCATGCGCCTCGTTCGCCACCCCAACATCGTCCAGCTGCACGAGGTCATGGCC AGCAAGAGCAAGATATACTTTGCAATGGAGTATGTCCGGGGTGGTGAGCTCTTCAGCAGG GTAGCCAGGGGGCGACTCAAGGAGGATGCTGCGAGGAAGTACTTCCAGCAGTTGATAGGG GCTGTGGACTTCTGTCACAGCCGCGGTGTCTACCACCGAGACCTCAAGCCAGAGAACCTC CTCGTCGACGAGAATGGCAACCTCAAAGTGTCGGACTTTGGGCTGAGCGCCTTCAAGGAG TGTCAGAAGCAGGACGGGCTGCTCCACACGACGTGTGGCACACCTGCATATGTTGCACCA GAGATAATCAATAAGAGGGGCTATGATGGAGCAAAAGCAGACATATGGTCTTGCGGTGTC ATACTCTTTGTTCTGCTTGCTGGCTACCTCCCATTCCATGACTCAAATCTAATGGAGATG TACCGGAAGATAAGCAAAGGTGATGTCAAGTTCCCACAGTGGTTCACTACTGATGTCCGA AGGCTTCTGTCCAGGCTGCTTGATCCAAATCCAAACATTAGGATCACCGTTGAGAAGCTA GTTGAGCATCCATGGTTCAAGAAGGGGTACAAACCAGCAGTGATGCTATCACAGCCAAAT GAATCAAACAACCTCAAGGATGTCCATACTGCTTTCAGTGCTGATCACAAGGACAATGAA GGCAAGGCAAAAGAACCAGCAAGCTCTTTGAAGCCAGTGAGCTTGAATGCATTTGACATC ATCTCCCTCTCCAAAGGATTTGATCTGTCAGGCCTGTTTGAGAACGACAAAGAGCAGAAG GCAGACTCACGGTTCATGACACAAAAACCAGCATCAGCAATAGTGTCAAAGCTAGAGCAG ATTGCTGAGACAGAGAGCTTCAAGGTGAAGAAGCAGGATGGACTGGTGAAGCTCCAGGGA TCCAAAGAAGGGAGGAAAGGGCAGCTCGCGATCGATGCAGAGATCTTTGAAGTGACACCA TCCTTCTTTGTTGTTGAGGTGAAGAAGTCTGCAGGGGACACGTTGGAGTACGAAAAATTC TGCAACAAGGGCCTAAGACCTTCTCTCAGGGACATCTGCTGGGATGGTCAGTCAGAGCAT CCATCACTGGCACAGTCATCAACTCTGACTCAGTCCTCTAAGTCAATCTCGAGACATGCC ATTTAA

Peptide Sequence

PEP ID	Os01t0206700-03
PEP Infomation	pep chromosome:IRGSP-1.0:1:5809589:5811389:-1 gene:Os01g0206700 transcript:Os01t0206700-03 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CALCINEURIN B-LIKE PROTEIN-INTERACTING PROTEIN KINASE 5 description:Similar to Serine/threonine protein kinase (CBL-interacting protein kinase 20). (Os01t0206700-01);Similar to cDNA clone:J013031K24, full insert sequence. (Os01t0206700-02);Similar to Serine/threonine protein kinase (CBL-interacting protein kinase 20). (Os01t0206700-03)
Sequence	MEKKASILMNRYELGRMLGQGTFAKVYHARNLASNQSVAIKVIDKEKVLRVGMIDQIKRE ISIMRLVRHPNIVQLHEVMASKSKIYFAMEYVRGGELFSRVARGRLKEDAARKYFQQLIG AVDFCHSRGVYHRDLKPENLLVDENGNLKVSDFGLSAFKECQKQDGLLHTTCGTPAYVAP EIINKRGYDGAKADIWSCGVILFVLLAGYLPFHDSNLMEMYRKISKGDVKFPQWFTTDVR RLLSRLLDPNPNIRITVEKLVEHPWFKKGYKPAVMLSQPNESNNLKDVHTAFSADHKDNE GKAKEPASSLKPVSLNAFDIISLSKGFDLSGLFENDKEQKADSRFMTQKPASAIVSKLEQ IAETESFKVKKQDGLVKLQGSKEGRKGQLAIDAEIFEVTPSFFVVEVKKSAGDTLEYEKF CNKGLRPSLRDICWDGQSEHPSLAQSSTLTQSSKSISRHAI

Transcript Sequence

Transcript ID	Os01t0206700-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:5809589:5811389:-1 gene:Os01g0206700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CALCINEURIN B-LIKE PROTEIN-INTERACTING PROTEIN KINASE 5 description:Similar to Serine/threonine protein kinase (CBL-interacting protein kinase 20). (Os01t0206700-01);Similar to cDNA clone:J013031K24, full insert sequence. (Os01t0206700-02);Similar to Serine/threonine protein kinase (CBL-interacting protein kinase 20). (Os01t0206700-03)
Sequence	GGAGGATCCCAAATACACCAATCGTGTCTTGGATTTTCCCAAACACAGCGCGCACTCTCG CCCTTCACCTCTCCTCCCTCTCACCCTTCCATTACATGGATCAGGGAGGGAGGAAGGAGG CCTGAAGTGGCGCAGAGTAGGCGCTTGTAAACAAATCCCCCCATTTGCTTCTTTTGCACT GAAGAATCCCTGAAGAATCCAGCAGGATGGAGAAGAAGGCGTCCATCCTCATGAACCGGT ATGAGCTCGGCCGCATGCTCGGGCAAGGCACCTTCGCCAAGGTGTACCATGCACGGAACC TTGCATCCAACCAGAGCGTCGCCATCAAGGTCATTGACAAGGAAAAGGTATTGCGTGTCG GCATGATTGACCAGATCAAGCGAGAGATCTCCATCATGCGCCTCGTTCGCCACCCCAACA TCGTCCAGCTGCACGAGGTCATGGCCAGCAAGAGCAAGATATACTTTGCAATGGAGTATG TCCGGGGTGGTGAGCTCTTCAGCAGGGTAGCCAGGGGGCGACTCAAGGAGGATGCTGCGA GGAAGTACTTCCAGCAGTTGATAGGGGCTGTGGACTTCTGTCACAGCCGCGGTGTCTACC ACCGAGACCTCAAGCCAGAGAACCTCCTCGTCGACGAGAATGGCAACCTCAAAGTGTCGG ACTTTGGGCTGAGCGCCTTCAAGGAGTGTCAGAAGCAGGACGGGCTGCTCCACACGACGT GTGGCACACCTGCATATGTTGCACCAGAGATAATCAATAAGAGGGGCTATGATGGAGCAA AAGCAGACATATGGTCTTGCGGTGTCATACTCTTTGTTCTGCTTGCTGGCTACCTCCCAT TCCATGACTCAAATCTAATGGAGATGTACCGGAAGATAAGCAAAGGTGATGTCAAGTTCC CACAGTGGTTCACTACTGATGTCCGAAGGCTTCTGTCCAGGCTGCTTGATCCAAATCCAA ACATTAGGATCACCGTTGAGAAGCTAGTTGAGCATCCATGGTTCAAGAAGGGGTACAAAC CAGCAGTGATGCTATCACAGCCAAATGAATCAAACAACCTCAAGGATGTCCATACTGCTT TCAGTGCTGATCACAAGGACAATGAAGGCAAGGCAAAAGAACCAGCAAGCTCTTTGAAGC CAGTGAGCTTGAATGCATTTGACATCATCTCCCTCTCCAAAGGATTTGATCTGTCAGGCC TGTTTGAGAACGACAAAGAGCAGAAGGCAGACTCACGGTTCATGACACAAAAACCAGCAT CAGCAATAGTGTCAAAGCTAGAGCAGATTGCTGAGACAGAGAGCTTCAAGGTGAAGAAGC AGGATGGACTGGTGAAGCTCCAGGGATCCAAAGAAGGGAGGAAAGGGCAGCTCGCGATCG ATGCAGAGATCTTTGAAGTGACACCATCCTTCTTTGTTGTTGAGGTGAAGAAGTCTGCAG GGGACACGTTGGAGTACGAAAAATTCTGCAACAAGGGCCTAAGACCTTCTCTCAGGGACA TCTGCTGGGATGGTCAGTCAGAGCATCCATCACTGGCACAGTCATCAACTCTGACTCAGT CCTCTAAGTCAATCTCGAGACATGCCATTTAAGTGCAACCTCATAAGAGATGCAGTAACA ATCCATTTTCCTCTCTCCTTTTCCCTTTCATCAAAGTGCTGAGCCTGAGAGTATTCTCAC TTGAGCATCAGGCTTAGGGCTCTTTGATGATAATTTTTGCCAGTTTTCCTTGTATAGTAG CAGTTTGTCTACATGGATCTCCTGTTCTTTCACCAATAGAAACAGGGAGATTGACAACAG C