Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0205600-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:5773300:5774176:1 gene:Os01g0205600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Crotonase, core domain containing protein. (Os01t0205600-01)
Sequence

ATGGACACGGCGAGCTTGTGCACCGTGGAGAAGCGCGGCGCCGTCCACGTCATCACCCTC
ACCGGCGCCGGCGAGCACCGCCTCGGCCCGCCCCTCCTGTCCGCGCTCCGCTCCGCCGTC
GCCGCCGTCCGCGCCGCCGCCGCCGCGGGCGCCGGCGGCGCGCTGGTGATTGCCGGCGAG
GGCAAGTACTTCTCCAACGGGTTCGACCTGGACTGGGCGCGCACCGTGCCCGCCGAGCTG
CACGCCTCCATGGGCGGCGCCTTCCGGGGCCTCGTCGCCGACCTCCTCGCTCTCCCGGTG
CCCACCGTCGCCGCCGTCACCGGCCACGCCGCGGCCGCCGGGTGCGCGCTGGCGCTCGCG
CACGACGCCGTGGTCATGCGCGCCTCCCGCGGCTTCCTGTACATGAGCGAGGTGGACGCC
GGCCTCAAGATCGTCGACTTCTTCGCCGAGCTGATCCGGCAGAAGGTCCCCGACGCCGTG
AACAGGAGGGATCTAGTCCTCCGGGGCGACAAGATGACGGCGGCCGACGCCCTGCGGCGG
GGCATCGTGGACGCGGCCGTCGACGGCGGCGTCGACGACGTGGTGGCCGCCGCCGTCCGG
GAGGCGGAGGCGCTCGCGGCGAGGGGATGGGACGGGGAGATCGTGGCCGAGACCAGGAAG
GCGATTTGGCCGGAGCTCTGGGCCAAGGTGAAGGACCACGCCACCGACGAGCCTCCGCCG
CCGCCGCCACGGCCGCTGCTGTAG

Peptide Sequence

PEP ID

Os01t0205600-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:5773300:5774176:1 gene:Os01g0205600 transcript:Os01t0205600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Crotonase, core domain containing protein. (Os01t0205600-01)
Sequence

MDTASLCTVEKRGAVHVITLTGAGEHRLGPPLLSALRSAVAAVRAAAAAGAGGALVIAGE
GKYFSNGFDLDWARTVPAELHASMGGAFRGLVADLLALPVPTVAAVTGHAAAAGCALALA
HDAVVMRASRGFLYMSEVDAGLKIVDFFAELIRQKVPDAVNRRDLVLRGDKMTAADALRR
GIVDAAVDGGVDDVVAAAVREAEALAARGWDGEIVAETRKAIWPELWAKVKDHATDEPPP
PPPRPLL

Transcript Sequence

Transcript ID

Os01t0205600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:5773300:5774176:1 gene:Os01g0205600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Crotonase, core domain containing protein. (Os01t0205600-01)
Sequence

ACATCCAGGTCTTGACGGCATTCATCGCCGAAATCCCCAAATGGACACGGCGAGCTTGTG
CACCGTGGAGAAGCGCGGCGCCGTCCACGTCATCACCCTCACCGGCGCCGGCGAGCACCG
CCTCGGCCCGCCCCTCCTGTCCGCGCTCCGCTCCGCCGTCGCCGCCGTCCGCGCCGCCGC
CGCCGCGGGCGCCGGCGGCGCGCTGGTGATTGCCGGCGAGGGCAAGTACTTCTCCAACGG
GTTCGACCTGGACTGGGCGCGCACCGTGCCCGCCGAGCTGCACGCCTCCATGGGCGGCGC
CTTCCGGGGCCTCGTCGCCGACCTCCTCGCTCTCCCGGTGCCCACCGTCGCCGCCGTCAC
CGGCCACGCCGCGGCCGCCGGGTGCGCGCTGGCGCTCGCGCACGACGCCGTGGTCATGCG
CGCCTCCCGCGGCTTCCTGTACATGAGCGAGGTGGACGCCGGCCTCAAGATCGTCGACTT
CTTCGCCGAGCTGATCCGGCAGAAGGTCCCCGACGCCGTGAACAGGAGGGATCTAGTCCT
CCGGGGCGACAAGATGACGGCGGCCGACGCCCTGCGGCGGGGCATCGTGGACGCGGCCGT
CGACGGCGGCGTCGACGACGTGGTGGCCGCCGCCGTCCGGGAGGCGGAGGCGCTCGCGGC
GAGGGGATGGGACGGGGAGATCGTGGCCGAGACCAGGAAGGCGATTTGGCCGGAGCTCTG
GGCCAAGGTGAAGGACCACGCCACCGACGAGCCTCCGCCGCCGCCGCCACGGCCGCTGCT
GTAGTCTACCTTACCGTATGTTGTATCGTGTATGCTTCCGCTGCATCAAGATTGGTGCGC
TGCAAATGTATCCTCGCAGGATTGCATGATTTGTATC