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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0205300-00
CDS Infomation

cds chromosome:IRGSP-1.0:1:5768175:5769203:1 gene:Os01g0205300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to rho termination factor, N-terminal domain containing protein. (Os01t0205300-00)
Sequence

ATGGAGAAAATGGGAGGAATTCTCTTGCAGCATCACCAAATCTCTCCAAATTATCTCGCA
AAGGCTGCCTTCCCAGGATCATTTGCTCTCCACAAAGACTTTGCAAATGGGATTCTGCTT
TGTCCTCCACGGAATAGCTTCTCATGCTCATCGTTGGGGAGCATCAGGTCAGAAGCAAAT
GGATCTCCGTTGCCAAGAACGGTTAATAGGCGTAGCAAAGAAGAGCTCATTGAGTTCTTC
AAAAGCATCCAGACCTCCATTGCCGAGGAATCGCCAAGAACTTCGAGGAGGACGAGGAAG
CAATCATCTGACCCGTTCGAAGAGGTTGAGAGGAGGAAGCAGTCATACGGCATAGCTGAT
GTTTCGGAGGAACATGCAGATGGGGAGCCAAAGGCGCTGGATCTGAATGATATGAAGGTG
GCTGAGCTGAGAGAATTGGCGAGGGCGAGAAGGATGAAAGGTTACTCGAGGCTGAAGAAG
AGTGAGCTGATTGATCGTCTGAAGGGTGTCTGA

Peptide Sequence

PEP ID

Os01t0205300-00
PEP Infomation

pep chromosome:IRGSP-1.0:1:5768175:5769203:1 gene:Os01g0205300 transcript:Os01t0205300-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to rho termination factor, N-terminal domain containing protein. (Os01t0205300-00)
Sequence

MEKMGGILLQHHQISPNYLAKAAFPGSFALHKDFANGILLCPPRNSFSCSSLGSIRSEAN
GSPLPRTVNRRSKEELIEFFKSIQTSIAEESPRTSRRTRKQSSDPFEEVERRKQSYGIAD
VSEEHADGEPKALDLNDMKVAELRELARARRMKGYSRLKKSELIDRLKGV

Transcript Sequence

Transcript ID

Os01t0205300-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:5768175:5769203:1 gene:Os01g0205300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to rho termination factor, N-terminal domain containing protein. (Os01t0205300-00)
Sequence

TTTTTTCTTCATGTGGCTGTGAGTGGATTGAAGCAGAGAGCAGAAGGAACAAACTTTTGG
CTCCATTGGAGGACAGGGAGTTCTTCACCTGTTGTGTGGTGGAGCAAGAAAAAATGGAGA
AAATGGGAGGAATTCTCTTGCAGCATCACCAAATCTCTCCAAATTATCTCGCAAAGGCTG
CCTTCCCAGGATCATTTGCTCTCCACAAAGACTTTGCAAATGGGATTCTGCTTTGTCCTC
CACGGAATAGCTTCTCATGCTCATCGTTGGGGAGCATCAGGTCAGAAGCAAATGGATCTC
CGTTGCCAAGAACGGTTAATAGGCGTAGCAAAGAAGAGCTCATTGAGTTCTTCAAAAGCA
TCCAGACCTCCATTGCCGAGGAATCGCCAAGAACTTCGAGGAGGACGAGGAAGCAATCAT
CTGACCCGTTCGAAGAGGTTGAGAGGAGGAAGCAGTCATACGGCATAGCTGATGTTTCGG
AGGAACATGCAGATGGGGAGCCAAAGGCGCTGGATCTGAATGATATGAAGGTGGCTGAGC
TGAGAGAATTGGCGAGGGCGAGAAGGATGAAAGGTTACTCGAGGCTGAAGAAGAGTGAGC
TGATTGATCGTCTGAAGGGTGTCTGA