Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0201600-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:5549651:5551003:-1 gene:Os01g0201600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Virulence factor, pectin lyase fold family protein. (Os01t0201600-01);Non-protein coding transcript. (Os01t0201600-02)
Sequence	ATGGCGGCAGCAAGGATGAAGAACACCACCATGGGTTGCGCCTTCCTGCTCGCCGCGTTC GCCATGGCCGCCGCCTTCGTCCCCGTGGCCGAGTCCAGGACCACCCCCGTGGAGAAGACG ACCACCACCCAAGCAGAGGATGGTGTCAAGAAGCCGGACTGCGTGCCGGCGTTCGACCCG CGCTCGTTCCCCGGCCACGGCGGCACCACGACTCCGACGCCGATCCCGGGCCACCACGGC GGCGGCGGCTCATCCGGGACCACGCCGTCGCACGGCGGCGGCCCCTCCGGGGGCGCGTTG CCTTCCCCGTCCCACGGCGGCGCGGCGCCGTCCCACGGAGGAGGGTACGGGGCTTCCCCG CCGGTGACGCCCTCCCCTGGCGGCGGCTACGGCGGCGGCTCCCCGGCGCCGTCCCACGGT GGCGGCGCCTACGGGAGCTCCCCTTCCACGCCTTCTGGCGGCGGCTCCTCCCCGACGCCG TCCCACGGTGGCGGCGCGTACGGCGGCGGCGGAGCTCCGGCGACACCGGCGTCGCACGAC GGCCACGGCCTCATCCCCACCACCCCCGGGACATGCGACTACTGGAGGTCGCATCCGATG GAGATGTGGTCGGCGCTGGGGCGGTGGCCGAGCTCGGTGGGCCACTTCTTCGGCTCCGGC TCCGGCGGCGCTGGAACGGGGATGAGCATCCAGGACGCGCTGGCCAACACCCGCGGCGAC GGCGCCGGCGAGCTGATGCGGGAGGGCGCCGCCGCGCTGCTCAACTCGATGACCCGCTCC GGCTTCCCCTACACGGCCGAGCAGGTGAGGGACGCGTTCGCGGCGGCGGCGGGGGGAGGC TCCGACGGCGCCGCCGCGGCGCAGGCGGCGGCGTTCAAGAAGGCCAACGAGGGCGGCCGC GCGTAG

Peptide Sequence

PEP ID	Os01t0201600-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:5549651:5551003:-1 gene:Os01g0201600 transcript:Os01t0201600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Virulence factor, pectin lyase fold family protein. (Os01t0201600-01);Non-protein coding transcript. (Os01t0201600-02)
Sequence	MAAARMKNTTMGCAFLLAAFAMAAAFVPVAESRTTPVEKTTTTQAEDGVKKPDCVPAFDP RSFPGHGGTTTPTPIPGHHGGGGSSGTTPSHGGGPSGGALPSPSHGGAAPSHGGGYGASP PVTPSPGGGYGGGSPAPSHGGGAYGSSPSTPSGGGSSPTPSHGGGAYGGGGAPATPASHD GHGLIPTTPGTCDYWRSHPMEMWSALGRWPSSVGHFFGSGSGGAGTGMSIQDALANTRGD GAGELMREGAAALLNSMTRSGFPYTAEQVRDAFAAAAGGGSDGAAAAQAAAFKKANEGGR A

Transcript Sequence

Transcript ID	Os01t0201600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:5549651:5551003:-1 gene:Os01g0201600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Virulence factor, pectin lyase fold family protein. (Os01t0201600-01);Non-protein coding transcript. (Os01t0201600-02)
Sequence	ACTCCACCACCACCACCCCCCATGGCGGCAGCAAGGATGAAGAACACCACCATGGGTTGC GCCTTCCTGCTCGCCGCGTTCGCCATGGCCGCCGCCTTCGTCCCCGTGGCCGAGTCCAGG ACCACCCCCGTGGAGAAGACGACCACCACCCAAGCAGAGGATGGTGTCAAGAAGCCGGAC TGCGTGCCGGCGTTCGACCCGCGCTCGTTCCCCGGCCACGGCGGCACCACGACTCCGACG CCGATCCCGGGCCACCACGGCGGCGGCGGCTCATCCGGGACCACGCCGTCGCACGGCGGC GGCCCCTCCGGGGGCGCGTTGCCTTCCCCGTCCCACGGCGGCGCGGCGCCGTCCCACGGA GGAGGGTACGGGGCTTCCCCGCCGGTGACGCCCTCCCCTGGCGGCGGCTACGGCGGCGGC TCCCCGGCGCCGTCCCACGGTGGCGGCGCCTACGGGAGCTCCCCTTCCACGCCTTCTGGC GGCGGCTCCTCCCCGACGCCGTCCCACGGTGGCGGCGCGTACGGCGGCGGCGGAGCTCCG GCGACACCGGCGTCGCACGACGGCCACGGCCTCATCCCCACCACCCCCGGGACATGCGAC TACTGGAGGTCGCATCCGATGGAGATGTGGTCGGCGCTGGGGCGGTGGCCGAGCTCGGTG GGCCACTTCTTCGGCTCCGGCTCCGGCGGCGCTGGAACGGGGATGAGCATCCAGGACGCG CTGGCCAACACCCGCGGCGACGGCGCCGGCGAGCTGATGCGGGAGGGCGCCGCCGCGCTG CTCAACTCGATGACCCGCTCCGGCTTCCCCTACACGGCCGAGCAGGTGAGGGACGCGTTC GCGGCGGCGGCGGGGGGAGGCTCCGACGGCGCCGCCGCGGCGCAGGCGGCGGCGTTCAAG AAGGCCAACGAGGGCGGCCGCGCGTAGACGACGACGACGACGTACGCAACGTACGCATCC GTGCATGCATGCATGGCTTAATTGTTTAATTAGGCGGGAAAATTAAAAAGTACGTGTGTT AAATTAGTTGTGTGGTTGATTTGATGGTGATGGTCTGGTTGTGTACGTGTGGTTGGTGTG TTTATGCGTGTAAAATCATGTGTAATCACTCTCGTGTTTAAGTTTTTTTTTTTTTGCTGT TTCAAATTCGATCGGTGGCAAATGAAGGAAGTGAGCTTATCCTT