Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0201250-00
CDS Infomation

cds chromosome:IRGSP-1.0:1:5529876:5531014:-1 gene:Os01g0201250 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to DNA-binding WRKY. (Os01t0201250-00)
Sequence

ATGGCCACCACCTCCACCCACGCGCCGCCGCCGCACTCGCCGCTGCCGCTGCCGGCGGCG
GCCGCCGGCGACCCTTCCAACCCGTTCCCGACCACGTTCGTGCAGGCGGACACCACGTCG
TTCAAGCAGGTGGTCCAGATCCTCACCGGCACCCCGGAGACCGCGGCCGCCGCCGCGGCG
GGCGGCGCAGCCGCCGCCGCGCCGCCCCCGGCGGCGGCGAAGCCCGCGCCCGCGCCGCCG
GGGCCGAAGAAGCCGGCGTTCAAGCTGTACGAGCGGCGGAGCAGCATGAAGAGCCTCAAG
ATGCTCTGCCCGCTGCTCCCCGCCGCCGCCGCCTTCGCCGCGGGCGGAGGAGGGGGGTTC
TCGCCCTCGCCGCGGGGGTTCTCGCCGCGCGGCGGCGGGATGGAGGTGCTGTCCCCGAGC
ATGCTGGACTTCCCGTCGCTGGCGCTGGGCAGCCCCGTGACGCCGCTCCCGCCGCTGCCC
GGGTCCGACGAGGCCGCCGCGGCCGAGGACCGCGCCATCGCCGAGAAGGGGTTCTACCTC
CACCCTTCCCCTCGCGGCAATGCCGGCGCCGCCGGCGAGCTCCAGCCGCCTCCCAGGCTC
CTCCCCCTCTTCCCCCTCCAGTCTCCTGGTCGGCAGTGA

Peptide Sequence

PEP ID

Os01t0201250-00
PEP Infomation

pep chromosome:IRGSP-1.0:1:5529876:5531014:-1 gene:Os01g0201250 transcript:Os01t0201250-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to DNA-binding WRKY. (Os01t0201250-00)
Sequence

MATTSTHAPPPHSPLPLPAAAAGDPSNPFPTTFVQADTTSFKQVVQILTGTPETAAAAAA
GGAAAAAPPPAAAKPAPAPPGPKKPAFKLYERRSSMKSLKMLCPLLPAAAAFAAGGGGGF
SPSPRGFSPRGGGMEVLSPSMLDFPSLALGSPVTPLPPLPGSDEAAAAEDRAIAEKGFYL
HPSPRGNAGAAGELQPPPRLLPLFPLQSPGRQ

Transcript Sequence

Transcript ID

Os01t0201250-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:5529876:5531014:-1 gene:Os01g0201250 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to DNA-binding WRKY. (Os01t0201250-00)
Sequence

ATGGCCACCACCTCCACCCACGCGCCGCCGCCGCACTCGCCGCTGCCGCTGCCGGCGGCG
GCCGCCGGCGACCCTTCCAACCCGTTCCCGACCACGTTCGTGCAGGCGGACACCACGTCG
TTCAAGCAGGTGGTCCAGATCCTCACCGGCACCCCGGAGACCGCGGCCGCCGCCGCGGCG
GGCGGCGCAGCCGCCGCCGCGCCGCCCCCGGCGGCGGCGAAGCCCGCGCCCGCGCCGCCG
GGGCCGAAGAAGCCGGCGTTCAAGCTGTACGAGCGGCGGAGCAGCATGAAGAGCCTCAAG
ATGCTCTGCCCGCTGCTCCCCGCCGCCGCCGCCTTCGCCGCGGGCGGAGGAGGGGGGTTC
TCGCCCTCGCCGCGGGGGTTCTCGCCGCGCGGCGGCGGGATGGAGGTGCTGTCCCCGAGC
ATGCTGGACTTCCCGTCGCTGGCGCTGGGCAGCCCCGTGACGCCGCTCCCGCCGCTGCCC
GGGTCCGACGAGGCCGCCGCGGCCGAGGACCGCGCCATCGCCGAGAAGGGGTTCTACCTC
CACCCTTCCCCTCGCGGCAATGCCGGCGCCGCCGGCGAGCTCCAGCCGCCTCCCAGGCTC
CTCCCCCTCTTCCCCCTCCAGTCTCCTGGTCGGCAGTGACCATCTCGCCATCTTCTTCTT
CTTCTTCTTCCTCCTTGGTATGCTCTGCTTGTCTGGTTAATGATGCTCTAATTACATGGC
TCATGGAGGGCGATTTCATCGCTGGATTGTCCAAATCTTCATCTTCATCTTCATCTTCAG
TCTCTCCTGTGAGCTCTGGGAGGATCGAATCGAATCCGTGTATGTCAGTCATGTTGTAAT
CCTAGTGTTTGTAACAGTAAATTTGGGCGCTTAAGAGAGATTAATTGATCGCCGAGCTTA
AAGTAACTGTTCTTTCCTCTTTTGTTTTTCTTTTCTTCCTCATCTTGATGGAATTTGCAT
AGGTTTTAGCTTGTTTTTTTTCCTTTCACTTCTCTTGCTTCAGAAGCTTGCTTTGGCAAT
TTGACTTGGTAGAGTAATTTGGTAGTCCAAATCTTGTACATTAAAGTTTTCTAAATTGAG
TTATATGCGAGAGGCAAGTGGATGCTCAAGTTGACATTTTTTTTATGGCAGCTAATATA