Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0201200-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:5510522:5514454:-1 gene:Os01g0201200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Protein kinase. (Os01t0201200-01)
Sequence	ATGGAGAGAGAGAATTCATGGCTGAGGAGAACCAAGTTCTCCCACACCGTGTACACAAGG TTGGATCACCAACGGGCGCCTATTGCTCCCCTTGGCAGGGATGTGGAGCAGAAACTGCAG AGATTTATTAGTATGGGGAAGTCTGTGTCGATGCCTGTTAACCGGGACGAGGATGCAGTG GCTGCGTTCAAGCACTCTGTGAGCTTGCCAACAGCCCGCTCCTCGCTTCAGATTGATAAG GAAAAGGCCAACAAGCAGAAGGCAGATTTTGATATCCCTTCAAGCCCTCCGGTGAACTCT GTTAATTCGAAGGGCCTGAAGGCAAGGAGCCTGGTCAAGAGCCCAAGCTCAGCGATGCTT CTCAGCTACTTGAACAAGGCACACCCGAATCGAGATTCAAACCTCAAGAAGACTGACAGA CCTCAGCACAAGCTGAGATCAAAGTCCCCTCTTCCGAATGTAGCGCCTTCTGATGTGTTC AGAGAAGCACGTGCAAGTAGCAGGAGGTTTACAAGCCCTCCCCCAAAGCGAAGGGGATCT GAAAGAAGCATTTACGGCAAATCGTTTGATAGACAACTGTCTGATATGAGCCAAAGCCCT GATTTGTGTTCAACCCCAGTGTCCTCTGATAAGCACAAGTCTCTAAAGGATAGCTCATGG ACTAGGAGATATTTTGATAATGGTGGAAGGAGGAGGGTTAGTGCAGTGGACGCTACTGAA GTTCGGAGGAACCGCGGGGTTAGTATGGCTCAGGCAGTTCAAACTACAGTTGATTGGACA CTTGATCCATCTAAGCTGCTCGTGGGGCATAAGTTTGCATCTGGGGCATATAGCCGGCTC TACAAAGGACTCTATGATGATAAACCAGTTGCCATTAAATTTATTCGGCAACCTGATGAT GACGACAATGGGAAGATGGCTGCAAAACTTGAAAAACAGTATAACAGTGAGGTCAATGCT CTATCTCACCTCTATCACAAGAATGTGATCAAGCTAGTAGCAGCCTATAAATGCCCACCA GTTTTTTACATAATTACTGAGTTCCTCCCTGGAGGTTCCCTGAGGTCATATCTAAATAGC ACAGAGCATCACCCCATCCCTCTGGAGAAGATCATATCCATTGCTCTCGATGTTGCCTGT GGGTTGGAGTACATTCACTCTCAAGGGGTCGTGCACCGTGACATTAAGCCAGAGAACATT CTCTTTGATGAGAACTTCTGTGTAAAGATTGCTGATTTTGGGATTGCCTGTGAGGAGTCA ATGTGTGATGTGCTGGTGGAAGACGAAGGCACTTACCGGTGGATGGCCCCCGAGATGATC AAGCGTAAGGCATACAACCGGAAGGTCGACGTCTATAGCTTTGGACTACTCCTATGGGAA ATGATCTCTGGAAGAATTCCTTTCGATGACTTAACCCCTCTCCAGGCGGCTTATGCTGTT GCAACTAGGCATGCGCGACCAGTAATTCCTCCAGAATGTCCAATGGCTCTGAGACCGTTG ATCGAACAGTGTTGCTCATTGCAGCCCGAAAAGAGGCCTGATTTCTGGCAGATTGTTAAA ATCCTGGAGGAATTTCATTCTGTTCTCTCCCAAGGTGGCTGCCTCGACTCACTGAAGAGC AGCAACAGCCAGGATCAGAAAAAGCGACTTCTGCATTGGATTCAAAAGCTGAAACCCTCA CATAGCACCTGA

Peptide Sequence

PEP ID	Os01t0201200-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:5510522:5514454:-1 gene:Os01g0201200 transcript:Os01t0201200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Protein kinase. (Os01t0201200-01)
Sequence	MERENSWLRRTKFSHTVYTRLDHQRAPIAPLGRDVEQKLQRFISMGKSVSMPVNRDEDAV AAFKHSVSLPTARSSLQIDKEKANKQKADFDIPSSPPVNSVNSKGLKARSLVKSPSSAML LSYLNKAHPNRDSNLKKTDRPQHKLRSKSPLPNVAPSDVFREARASSRRFTSPPPKRRGS ERSIYGKSFDRQLSDMSQSPDLCSTPVSSDKHKSLKDSSWTRRYFDNGGRRRVSAVDATE VRRNRGVSMAQAVQTTVDWTLDPSKLLVGHKFASGAYSRLYKGLYDDKPVAIKFIRQPDD DDNGKMAAKLEKQYNSEVNALSHLYHKNVIKLVAAYKCPPVFYIITEFLPGGSLRSYLNS TEHHPIPLEKIISIALDVACGLEYIHSQGVVHRDIKPENILFDENFCVKIADFGIACEES MCDVLVEDEGTYRWMAPEMIKRKAYNRKVDVYSFGLLLWEMISGRIPFDDLTPLQAAYAV ATRHARPVIPPECPMALRPLIEQCCSLQPEKRPDFWQIVKILEEFHSVLSQGGCLDSLKS SNSQDQKKRLLHWIQKLKPSHST

Transcript Sequence

Transcript ID	Os01t0201200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:5510522:5514454:-1 gene:Os01g0201200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Protein kinase. (Os01t0201200-01)
Sequence	GGAAGAGAGAGAGAGTTAAGCTGGGCTCAGGGAGGACTAGGAGAGCAGCAGAGGCGACCG CTTGTTGTTGCTGCTGCGTTTGCGTTTCTAGGGTGTAAGCACGGGCCATCTTTCCGGTGG GAGCTTTGAATGCCAATCTTCACCACCATAGTAGTACTATCTCATTATCTCTCCCTCTGA GTCCTCTCTCGATCCGGTTCGGCTTGCTCGGGTTCGCGCAACGGAAAGGCGAGATTTTTG AGGGGATGAAGTAGTTGCCATTCTGATATCCTTCTCTATCTATCCGCTTCGACGAGCCGC GATCTCTGGGAGTTTATCTTTCAGGAATCTTGAGAAGCCTATGCAATTGCTGGTTCTTCA TCAACCTTCGCAAGTTTTTTGGTTCCGTTTGTAGATATTAGCTAACCATAGATCAATTAT AGTTTAGCCATCTTATAAACAAGCTGTTGTGAGAATTTGACTTCAGATGGGCCAAGGAGT TGCGGCTATTCCTGGCCTTGGGTCTCTTGGAGGCGTTTCCTGCGACAAATTCCTTTTCTC CTTTGCGAAATTCTACTTCAACATGTGGTTTCTACTGATCCAGGCATCCAAAGTTGGAAT TTGATCACTTGTGAGGTAGCTTCTCTTCGCTTTCGTGGTTTGCCAGAATGGAGAGAGAGA ATTCATGGCTGAGGAGAACCAAGTTCTCCCACACCGTGTACACAAGGTTGGATCACCAAC GGGCGCCTATTGCTCCCCTTGGCAGGGATGTGGAGCAGAAACTGCAGAGATTTATTAGTA TGGGGAAGTCTGTGTCGATGCCTGTTAACCGGGACGAGGATGCAGTGGCTGCGTTCAAGC ACTCTGTGAGCTTGCCAACAGCCCGCTCCTCGCTTCAGATTGATAAGGAAAAGGCCAACA AGCAGAAGGCAGATTTTGATATCCCTTCAAGCCCTCCGGTGAACTCTGTTAATTCGAAGG GCCTGAAGGCAAGGAGCCTGGTCAAGAGCCCAAGCTCAGCGATGCTTCTCAGCTACTTGA ACAAGGCACACCCGAATCGAGATTCAAACCTCAAGAAGACTGACAGACCTCAGCACAAGC TGAGATCAAAGTCCCCTCTTCCGAATGTAGCGCCTTCTGATGTGTTCAGAGAAGCACGTG CAAGTAGCAGGAGGTTTACAAGCCCTCCCCCAAAGCGAAGGGGATCTGAAAGAAGCATTT ACGGCAAATCGTTTGATAGACAACTGTCTGATATGAGCCAAAGCCCTGATTTGTGTTCAA CCCCAGTGTCCTCTGATAAGCACAAGTCTCTAAAGGATAGCTCATGGACTAGGAGATATT TTGATAATGGTGGAAGGAGGAGGGTTAGTGCAGTGGACGCTACTGAAGTTCGGAGGAACC GCGGGGTTAGTATGGCTCAGGCAGTTCAAACTACAGTTGATTGGACACTTGATCCATCTA AGCTGCTCGTGGGGCATAAGTTTGCATCTGGGGCATATAGCCGGCTCTACAAAGGACTCT ATGATGATAAACCAGTTGCCATTAAATTTATTCGGCAACCTGATGATGACGACAATGGGA AGATGGCTGCAAAACTTGAAAAACAGTATAACAGTGAGGTCAATGCTCTATCTCACCTCT ATCACAAGAATGTGATCAAGCTAGTAGCAGCCTATAAATGCCCACCAGTTTTTTACATAA TTACTGAGTTCCTCCCTGGAGGTTCCCTGAGGTCATATCTAAATAGCACAGAGCATCACC CCATCCCTCTGGAGAAGATCATATCCATTGCTCTCGATGTTGCCTGTGGGTTGGAGTACA TTCACTCTCAAGGGGTCGTGCACCGTGACATTAAGCCAGAGAACATTCTCTTTGATGAGA ACTTCTGTGTAAAGATTGCTGATTTTGGGATTGCCTGTGAGGAGTCAATGTGTGATGTGC TGGTGGAAGACGAAGGCACTTACCGGTGGATGGCCCCCGAGATGATCAAGCGTAAGGCAT ACAACCGGAAGGTCGACGTCTATAGCTTTGGACTACTCCTATGGGAAATGATCTCTGGAA GAATTCCTTTCGATGACTTAACCCCTCTCCAGGCGGCTTATGCTGTTGCAACTAGGCATG CGCGACCAGTAATTCCTCCAGAATGTCCAATGGCTCTGAGACCGTTGATCGAACAGTGTT GCTCATTGCAGCCCGAAAAGAGGCCTGATTTCTGGCAGATTGTTAAAATCCTGGAGGAAT TTCATTCTGTTCTCTCCCAAGGTGGCTGCCTCGACTCACTGAAGAGCAGCAACAGCCAGG ATCAGAAAAAGCGACTTCTGCATTGGATTCAAAAGCTGAAACCCTCACATAGCACCTGAG TTCCTGTAGTCTCTAGCATCCTTTCTGCCAGATGTTTTTATCCGGTTCTGTATGCTCAGT AGCTTAGCATAAGATTTTCATTTTTGTTCAGAAAAGGTGAACCTGTGTTCTAGGATGCTT GGACATGTTTATCAGGTGAATTGCAAGTAGGTTTACAGTACCTGTATATTGTGCTACCCT TCTGCTCTCTTCTCTGTTTTTGTGAAATTTAGTAGCAGATCATTC