Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0201100-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:5507567:5509494:1 gene:Os01g0201100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to xylosyltransferase oxt. (Os01t0201100-01)
Sequence

ATGCCGGCGAGCACCATGGGCGGCGGCGGCGGAGGAGGTCGAGGAGGAGGTGATCATCAC
TCGCCGACGTCGGGGAAGACGCCGCGGGGGGACTACTCCGCGCTGGCGACGTCGACGCCG
ACGAAGCAGTCGCCGCGCTGGCCGTCGCCGTCGGCGGCGGCGTCGTCCGTCCTGCCGAGC
GGCGCGGCGGCGCTGCTGGAGAGCCGGTGGGCGCTGCCGGCGGCGTTCGGCGTGTTCCTC
TTCCTCGCCGTCACGCTGGCGGTCGCCACCTCGTCGCTCTCCGTCGCGGCGTCGCTCCCC
GCCTTCTTCCCCGCCGCCAAGCAGCCGCTGCCGCTGCCGCCGCCGTCGCCGCCGCCAGGC
GCCGGCGTGGCGAGGCTGGCCTACCTGGTGTCCGGCTCCAAGGGCGACCTCGACCGGCTA
TGGCGGACGCTCCACGCGCTCTACCACCCGCGAAACCTCTACGTCGTCCACCTCGACCGG
GAGGCCGCCGTGTCGGAGCGGCTCGAGCTGGCGGCGCGCGTGGCGAACAGCTCCATGTTC
CGGCGAGTCGGCAACGTGGAGGTGATCCGCCGCTCCAACATGGTGACCTACCGCGGCCCC
ACCATGGTCGCCAACACCCTCCACGCCTGCGCCGTCCTCCTCCGACGCAGCCGCGACTGG
GACTGGTTCATCAACCTCTCCGCCTCCGACTACCCTCTCATGACCCAAGACGATATCCTC
CACGTGTTGTCCTCGATCCCGAGGAACACCAACTTCATCGAGCACACCGGCTATCTAGGA
TGGAAGGAGGGGCAGAGGGCGAGGCCGGTGATCGTGGACCCGGGGCTGTACATGGCGCGG
AAGCAGGACATCTTCTACGTGGAGCAGCGGCGGGAGCTGCCGACGGCGTTCAAGCTGTTC
ACGGGGTCGGCGTGGGTGGCGCTGAGCAGGGATTTCGCCGAATACGTGGTGTGGGGGTGG
GACAACCTGCCGCGGACGCTGCTCATGTACTACGCCAACTTCGTCTCCTCGCCGGAGGGC
TACTTCCAGACCGTGCTCTGCAACGCGCCGCGGTTCGTGCCCACGGCGGCGAACCACGAC
CTCCACCACATCCAGTGGGACACGCCGCCGCGCCAGCACCCGCACCCGCTCGCCCTCGCC
GACCGCCCCGCCATGGAGCGCAGCGGCGCCCCCTTCGCCCGCAAGTTCCCCCGCGACGAC
CCCGTGCTCGACGCCATCGACGCCGACCTGCTCGGCGGCCGCGGCCGCGCCAATGGCAAT
GGCACGGCGGGCGCCGAAGGCGACATGTTCGTCCGGGGCGGGTGGTGCGTCGGCGCCGGC
GGCGGGTGCGACGAGGTCGGCGACGACTGGGTGCTCCGGCCGGGCCCCGGCGCCGCGCGG
CTGGACAAGCTCATGGACAGGATCGTCAGGTCGGAGGCCTTCGTCAACAGCCAGTGCAAG
TAG

Peptide Sequence

PEP ID

Os01t0201100-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:5507567:5509494:1 gene:Os01g0201100 transcript:Os01t0201100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to xylosyltransferase oxt. (Os01t0201100-01)
Sequence

MPASTMGGGGGGGRGGGDHHSPTSGKTPRGDYSALATSTPTKQSPRWPSPSAAASSVLPS
GAAALLESRWALPAAFGVFLFLAVTLAVATSSLSVAASLPAFFPAAKQPLPLPPPSPPPG
AGVARLAYLVSGSKGDLDRLWRTLHALYHPRNLYVVHLDREAAVSERLELAARVANSSMF
RRVGNVEVIRRSNMVTYRGPTMVANTLHACAVLLRRSRDWDWFINLSASDYPLMTQDDIL
HVLSSIPRNTNFIEHTGYLGWKEGQRARPVIVDPGLYMARKQDIFYVEQRRELPTAFKLF
TGSAWVALSRDFAEYVVWGWDNLPRTLLMYYANFVSSPEGYFQTVLCNAPRFVPTAANHD
LHHIQWDTPPRQHPHPLALADRPAMERSGAPFARKFPRDDPVLDAIDADLLGGRGRANGN
GTAGAEGDMFVRGGWCVGAGGGCDEVGDDWVLRPGPGAARLDKLMDRIVRSEAFVNSQCK

Transcript Sequence

Transcript ID

Os01t0201100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:5507567:5509494:1 gene:Os01g0201100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to xylosyltransferase oxt. (Os01t0201100-01)
Sequence

GAGAGCGAACCATGAAAATTCTGTAGCGTGGTGCGGCGGCGGTGGGTGTCATGCCGGCGA
GCACCATGGGCGGCGGCGGCGGAGGAGGTCGAGGAGGAGGTGATCATCACTCGCCGACGT
CGGGGAAGACGCCGCGGGGGGACTACTCCGCGCTGGCGACGTCGACGCCGACGAAGCAGT
CGCCGCGCTGGCCGTCGCCGTCGGCGGCGGCGTCGTCCGTCCTGCCGAGCGGCGCGGCGG
CGCTGCTGGAGAGCCGGTGGGCGCTGCCGGCGGCGTTCGGCGTGTTCCTCTTCCTCGCCG
TCACGCTGGCGGTCGCCACCTCGTCGCTCTCCGTCGCGGCGTCGCTCCCCGCCTTCTTCC
CCGCCGCCAAGCAGCCGCTGCCGCTGCCGCCGCCGTCGCCGCCGCCAGGCGCCGGCGTGG
CGAGGCTGGCCTACCTGGTGTCCGGCTCCAAGGGCGACCTCGACCGGCTATGGCGGACGC
TCCACGCGCTCTACCACCCGCGAAACCTCTACGTCGTCCACCTCGACCGGGAGGCCGCCG
TGTCGGAGCGGCTCGAGCTGGCGGCGCGCGTGGCGAACAGCTCCATGTTCCGGCGAGTCG
GCAACGTGGAGGTGATCCGCCGCTCCAACATGGTGACCTACCGCGGCCCCACCATGGTCG
CCAACACCCTCCACGCCTGCGCCGTCCTCCTCCGACGCAGCCGCGACTGGGACTGGTTCA
TCAACCTCTCCGCCTCCGACTACCCTCTCATGACCCAAGACGATATCCTCCACGTGTTGT
CCTCGATCCCGAGGAACACCAACTTCATCGAGCACACCGGCTATCTAGGATGGAAGGAGG
GGCAGAGGGCGAGGCCGGTGATCGTGGACCCGGGGCTGTACATGGCGCGGAAGCAGGACA
TCTTCTACGTGGAGCAGCGGCGGGAGCTGCCGACGGCGTTCAAGCTGTTCACGGGGTCGG
CGTGGGTGGCGCTGAGCAGGGATTTCGCCGAATACGTGGTGTGGGGGTGGGACAACCTGC
CGCGGACGCTGCTCATGTACTACGCCAACTTCGTCTCCTCGCCGGAGGGCTACTTCCAGA
CCGTGCTCTGCAACGCGCCGCGGTTCGTGCCCACGGCGGCGAACCACGACCTCCACCACA
TCCAGTGGGACACGCCGCCGCGCCAGCACCCGCACCCGCTCGCCCTCGCCGACCGCCCCG
CCATGGAGCGCAGCGGCGCCCCCTTCGCCCGCAAGTTCCCCCGCGACGACCCCGTGCTCG
ACGCCATCGACGCCGACCTGCTCGGCGGCCGCGGCCGCGCCAATGGCAATGGCACGGCGG
GCGCCGAAGGCGACATGTTCGTCCGGGGCGGGTGGTGCGTCGGCGCCGGCGGCGGGTGCG
ACGAGGTCGGCGACGACTGGGTGCTCCGGCCGGGCCCCGGCGCCGCGCGGCTGGACAAGC
TCATGGACAGGATCGTCAGGTCGGAGGCCTTCGTCAACAGCCAGTGCAAGTAGCTAAGCT
AGCTTAGCTTAGCTGCGAGAGTGATCGAGTGAGATAAATCACTCACTGGTTAATCTTAAT
CTGCATCGTGTAATTCGCTTCTTTTTTCTTCTTTTTTTTTACCCTACTGATTTACTTGCA
GGTTTGTACAAATTCATCAAGTTAAAACTTAAAAGCATATATATGTATAGAGATAGAGAG
AGAAAGAGAGAGATAAGTATATAGTACTTGCTAGTACTAATTAACTGTAATCCATTTTCA
TTATCCCATCTCG