Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0200600-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:5454772:5455667:-1 gene:Os01g0200600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ETHYLENE RESPONSE FACTOR 39 description:Similar to Avr9/Cf-9 rapidly elicited protein 111A. (Os01t0200600-01)
Sequence	ATGGCAGCCAGCGAGCAGAGCTCCGAGTCGTCGTCGACGGCGTCCACGTCGTCGTGCGGC AAGAAACAGCAGGTGGCCGGGAAGAGGAAGCGCGAGGACGTCGGCGGCGGCGGGGAGCAG GCGGCGGCGGTGGCGTACAGGGGGGTGAGGATGAGGGCGTGGGGGAAGTGGGTGTCGGAG ATCAGGGAGCCGAGGAAGAAGTCCCGCATCTGGCTCGGCACCTTCCCGTGCCCGGAGATG GCGGCGCGTGCGCACGACGTCGCCGCGCTCAGCATCAAGGGCGCCCGCGCCGTCCTCAAC TTCCCCGACCTCGCCCCTGCCCTCCCGCGCCCGGCCTCCCTCGCCCCCCGCGACGTCCAG GCCGCCGCCGCCCTCGCCGCCGTCATGCACCACCACAAACACCCCTCCTCCTCCACCTCC ACCTCCTCGCCGCCGGCTGCTCCTCCGCCGGACGAACACCACCCTCGCCACGAGCCGCAG CAGCCTGAGTCGAGCAGGGAGGATGACCAGCAGCAGCAGCCGGCGGCGGCGGCGGCGGCG CAGATGGCGGTGGCCGAGCTGGTGTTCGACGAGCTGGCGCCGCTGTGGGTGGAGGACGTG GTGGAGTTCGGGACGTCGGATCATTGCTGGACGGCGTACGATGCGCTTGACCCCATCGGC TTCCAGCCTCTCCTCTGGGAGTACTAG

Peptide Sequence

PEP ID	Os01t0200600-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:5454772:5455667:-1 gene:Os01g0200600 transcript:Os01t0200600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ETHYLENE RESPONSE FACTOR 39 description:Similar to Avr9/Cf-9 rapidly elicited protein 111A. (Os01t0200600-01)
Sequence	MAASEQSSESSSTASTSSCGKKQQVAGKRKREDVGGGGEQAAAVAYRGVRMRAWGKWVSE IREPRKKSRIWLGTFPCPEMAARAHDVAALSIKGARAVLNFPDLAPALPRPASLAPRDVQ AAAALAAVMHHHKHPSSSTSTSSPPAAPPPDEHHPRHEPQQPESSREDDQQQQPAAAAAA QMAVAELVFDELAPLWVEDVVEFGTSDHCWTAYDALDPIGFQPLLWEY

Transcript Sequence

Transcript ID	Os01t0200600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:5454772:5455667:-1 gene:Os01g0200600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ETHYLENE RESPONSE FACTOR 39 description:Similar to Avr9/Cf-9 rapidly elicited protein 111A. (Os01t0200600-01)
Sequence	CCCACCTCCGCGTCGTCGTCGTCGTCGTCGAGCGCTCGATCGATCGCCATGGCAGCCAGC GAGCAGAGCTCCGAGTCGTCGTCGACGGCGTCCACGTCGTCGTGCGGCAAGAAACAGCAG GTGGCCGGGAAGAGGAAGCGCGAGGACGTCGGCGGCGGCGGGGAGCAGGCGGCGGCGGTG GCGTACAGGGGGGTGAGGATGAGGGCGTGGGGGAAGTGGGTGTCGGAGATCAGGGAGCCG AGGAAGAAGTCCCGCATCTGGCTCGGCACCTTCCCGTGCCCGGAGATGGCGGCGCGTGCG CACGACGTCGCCGCGCTCAGCATCAAGGGCGCCCGCGCCGTCCTCAACTTCCCCGACCTC GCCCCTGCCCTCCCGCGCCCGGCCTCCCTCGCCCCCCGCGACGTCCAGGCCGCCGCCGCC CTCGCCGCCGTCATGCACCACCACAAACACCCCTCCTCCTCCACCTCCACCTCCTCGCCG CCGGCTGCTCCTCCGCCGGACGAACACCACCCTCGCCACGAGCCGCAGCAGCCTGAGTCG AGCAGGGAGGATGACCAGCAGCAGCAGCCGGCGGCGGCGGCGGCGGCGCAGATGGCGGTG GCCGAGCTGGTGTTCGACGAGCTGGCGCCGCTGTGGGTGGAGGACGTGGTGGAGTTCGGG ACGTCGGATCATTGCTGGACGGCGTACGATGCGCTTGACCCCATCGGCTTCCAGCCTCTC CTCTGGGAGTACTAGGCTGCTGCTTGTAAAACAGCTTCCTCTTCTTTTCTTTTCTTTTCT TTTTTTGGTTTTGTTTTTTGTGTGGATTTTTTCCCCTAGTGCTGCTTAAAATGTGGCTTG TTTTTTTTCTTCTCTCTTTCAATCTTGATTTGAGTTGGATTTGGAGTTTGTGTGAT