Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0200500-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:5442866:5446246:1 gene:Os01g0200500 gene_biotype:protein_coding transcript_biotype:protein_coding description:MPPN family protein. (Os01t0200500-01)
Sequence

ATGAGCGCATCCAGGCCGGATCACCGGCGGCACCACCCGCCGTTTCTCCGGGACCTCTCG
TCGCCGATCTCCTCGGCCGTGCGGCTGCCCCCGGCCTCCCTCCGCCGCGAGACGCAAGGT
TCCACCACCCCGCCGCCGCCGCCGCCGCCGCTGCTGTTCCTCGACGACCTCTCCCACCAC
TCCCCCTCGCCGAGGCCCGCCACCCCACCTCAGGCGGCGGCCATGAGCCCCTCGCCTCCC
CCTCCCCACCGCGGCGGCCTCTTCTCCTCCACCCCGCTGCGCTCCAATGGGTCCCCCTCC
CCGGCCGCGTGGTGGTCCTCCTCGAGGGAGGAGATGGCCAGGGAGGGCTCGCCGGTCGAT
GGTGTCGTGCAGCCGCAGCAGCAGCCGTCTCCGACGACGGCGTCTGGGCAGCAGTCGCAG
CAGCAGAAGGTGACGCTCATCACGCTGCCGCCACCCAGGGAAGTTGCGCGGCCGGAGATG
CCGAAGGATTCGACACCTTCCGCTGGCCGTGTCGACGAGGAGGAGTGGGTCACCGTTTTT
GGTTTTTTACCTGGCGATACCAACTTGGTACTGAGAGAATTTGAGAAGTGTGGTATAGTC
TTGAGACATGTCCCTGGTCCAAGGGATGCGAACTGGATGCATATCCTGTATCAGAGCCGG
CATGATGCACAAAAAGCTCTCACCAAGCACGGTCAACAGTTAAACAGTGTTCTTATCATC
GGTGTGAAGCAAGTGGACCCATGGCAGCGGCAGTACCTGAATGAGAAGACAAATGAGAAC
TTTCAAGTTGGTGCAACAGATCCATTTCCATCACAGCATGTAGCACCAAGTTCATTTACA
ACTAGAAATGCACTAGCACCTTTGCCTAGCAATTCTATGCCAAATGGAATCGGCAACGGG
AGTGGCCGTGGTGCTTCGGGGGCCATTGCTTCACCCACAAAATCAGTATTGTCCAAAGTT
ATGGACCTGATGTTCGGCCTCTAA

Peptide Sequence

PEP ID

Os01t0200500-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:5442866:5446246:1 gene:Os01g0200500 transcript:Os01t0200500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:MPPN family protein. (Os01t0200500-01)
Sequence

MSASRPDHRRHHPPFLRDLSSPISSAVRLPPASLRRETQGSTTPPPPPPPLLFLDDLSHH
SPSPRPATPPQAAAMSPSPPPPHRGGLFSSTPLRSNGSPSPAAWWSSSREEMAREGSPVD
GVVQPQQQPSPTTASGQQSQQQKVTLITLPPPREVARPEMPKDSTPSAGRVDEEEWVTVF
GFLPGDTNLVLREFEKCGIVLRHVPGPRDANWMHILYQSRHDAQKALTKHGQQLNSVLII
GVKQVDPWQRQYLNEKTNENFQVGATDPFPSQHVAPSSFTTRNALAPLPSNSMPNGIGNG
SGRGASGAIASPTKSVLSKVMDLMFGL

Transcript Sequence

Transcript ID

Os01t0200500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:5442866:5446246:1 gene:Os01g0200500 gene_biotype:protein_coding transcript_biotype:protein_coding description:MPPN family protein. (Os01t0200500-01)
Sequence

GGGCACTCGCTTCTCCACTAGGGTTTCTCGCCGCCGCCGCCGCCGCTCGCCGTCGCCGTC
GCCGCCGGATCAGAGATGAGCGCATCCAGGCCGGATCACCGGCGGCACCACCCGCCGTTT
CTCCGGGACCTCTCGTCGCCGATCTCCTCGGCCGTGCGGCTGCCCCCGGCCTCCCTCCGC
CGCGAGACGCAAGGTTCCACCACCCCGCCGCCGCCGCCGCCGCCGCTGCTGTTCCTCGAC
GACCTCTCCCACCACTCCCCCTCGCCGAGGCCCGCCACCCCACCTCAGGCGGCGGCCATG
AGCCCCTCGCCTCCCCCTCCCCACCGCGGCGGCCTCTTCTCCTCCACCCCGCTGCGCTCC
AATGGGTCCCCCTCCCCGGCCGCGTGGTGGTCCTCCTCGAGGGAGGAGATGGCCAGGGAG
GGCTCGCCGGTCGATGGTGTCGTGCAGCCGCAGCAGCAGCCGTCTCCGACGACGGCGTCT
GGGCAGCAGTCGCAGCAGCAGAAGGTGACGCTCATCACGCTGCCGCCACCCAGGGAAGTT
GCGCGGCCGGAGATGCCGAAGGATTCGACACCTTCCGCTGGCCGTGTCGACGAGGAGGAG
TGGGTCACCGTTTTTGGTTTTTTACCTGGCGATACCAACTTGGTACTGAGAGAATTTGAG
AAGTGTGGTATAGTCTTGAGACATGTCCCTGGTCCAAGGGATGCGAACTGGATGCATATC
CTGTATCAGAGCCGGCATGATGCACAAAAAGCTCTCACCAAGCACGGTCAACAGTTAAAC
AGTGTTCTTATCATCGGTGTGAAGCAAGTGGACCCATGGCAGCGGCAGTACCTGAATGAG
AAGACAAATGAGAACTTTCAAGTTGGTGCAACAGATCCATTTCCATCACAGCATGTAGCA
CCAAGTTCATTTACAACTAGAAATGCACTAGCACCTTTGCCTAGCAATTCTATGCCAAAT
GGAATCGGCAACGGGAGTGGCCGTGGTGCTTCGGGGGCCATTGCTTCACCCACAAAATCA
GTATTGTCCAAAGTTATGGACCTGATGTTCGGCCTCTAAATCCTGTTACCAAGTACTGGC
TGTTATTCTTTTGGCTGTTCCAAGGCAAATCGAGGATTACTGATCATAACATTTCTTATT
GTTGGGTTTTTCGCACCGAAGTGACATTATTGGTCCACAGAATCTGTATTGTACCGAGCC
TAAGATCATCAGGGTGTCATACTGGTATATCACCCGGTCGGTCTGGAGCTAGTGTTGATG
GTGTTTCGCTCGTAAGCATTCAGTGGATCATCCAATACCAAACCATATGGAAATTATGTC
CATGGAAATATCATCAAGTATCATCCTGGTTTTATACATATTGAAATGATTCTGACCTGT
ATGTGAATGCATCTTAGTAAATTGTTTTCGAATGATTTGACATGAGAGCCTATATATATG
TTGAATGCGTCTT