Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0200000-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:5413595:5416778:-1 gene:Os01g0200000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AUTOPHAGY ASSOCIATED GENE 3A description:Similar to autophagocytosis protein AUT1-like [Oryza sativa (japonica cultivar-group)]. (Os01t0200000-01)
Sequence	ATGCAGGTGAAGCAGAAGGTGTACGAGCTCTACAAGGGGACGGTGGAGCGGGTCACGGGC CCGCGCACCGTGTCGGCCTTCCTCGACAAGGGCGTCCTCTCCGTCCCCGAGTTCATCCTC GCCGGCGACAACCTCGTCTCCAAGTGCCCCACCTGGTCCTGGGAGGCGGGCGATCCGAGC AAGAGGAAGCCGTATCTCCCACCTGACAAGCAATTTCTCGTCACCAGGAACGTGCCTTGC CTAAGACGTGCTGTTTCGCTTGAAGAAGAGTATGATGCAGCAGGAGCTGAGGTAGTTCTC GGTGATGATGAGGACGGTGAAGGCTGGCTTGCCACACATGGAGTGCAAGCATCAAAGCAA GAAGAGGAGGAAGACATACCATCGATGGATACATTGGATATAGGGAAAACTGAAGGGATA AAGTCTATTCCCTCATATTTCAGTGCTGGTAAGAAGGCTGAAGAAGAGGAGGATATACCA GACATGGACACTTATGAAGACTCAGGGAATGATTCAGTGGCTACCGCTCAACCTTCATAT TTTGTCGCAGAAGAGCCTGAAGATGACAACATCCTTCGTACTAGGACATATGACGTTAGC ATCACATATGACAAATATTACCAAACCCCACGTGTCTGGCTTACCGGATATGATGAGTCA AGAATGCCACTAAAGCCTGAACTTGTGTTTGAAGATATCAGCCAAGATCATGCACGGAAG ACGGTGACTATTGAAGACCATCCTCACTTGTCAGCAGGCAAGCATGCTTCAGTGCATCCA TGCAAACATGCTGCTGTGATGAAAAAGATCATTGATGTTCTAATGTCTCAAGGAGTTGAA CCAGAAGTTGACAAGTACCTTTTCATATTTTTGAAGTTTATGGCCTCAGTCATACCCACT ATTGAATATGACTACACTATGGACTTCGATCTGGGCAGCACAAGCAGATGA

Peptide Sequence

PEP ID	Os01t0200000-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:5413595:5416778:-1 gene:Os01g0200000 transcript:Os01t0200000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AUTOPHAGY ASSOCIATED GENE 3A description:Similar to autophagocytosis protein AUT1-like [Oryza sativa (japonica cultivar-group)]. (Os01t0200000-01)
Sequence	MQVKQKVYELYKGTVERVTGPRTVSAFLDKGVLSVPEFILAGDNLVSKCPTWSWEAGDPS KRKPYLPPDKQFLVTRNVPCLRRAVSLEEEYDAAGAEVVLGDDEDGEGWLATHGVQASKQ EEEEDIPSMDTLDIGKTEGIKSIPSYFSAGKKAEEEEDIPDMDTYEDSGNDSVATAQPSY FVAEEPEDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMPLKPELVFEDISQDHARK TVTIEDHPHLSAGKHASVHPCKHAAVMKKIIDVLMSQGVEPEVDKYLFIFLKFMASVIPT IEYDYTMDFDLGSTSR

Transcript Sequence

Transcript ID	Os01t0200000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:5413595:5416778:-1 gene:Os01g0200000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AUTOPHAGY ASSOCIATED GENE 3A description:Similar to autophagocytosis protein AUT1-like [Oryza sativa (japonica cultivar-group)]. (Os01t0200000-01)
Sequence	AGTTTGTTTGTTCGTTCGTTCCCCCAAAAAATTTGGATCCGCCTCTGCAGATTGGTGCCT TCCTTCCGCTGGAGGCAACCCCCCCCCCCCTCCCTTGTACGCTTCGTCTTCGTCTCCGGC GACGAGCGGAAGCAAACCTTCTCCGGCGAGCAGCAGGATGCAGGTGAAGCAGAAGGTGTA CGAGCTCTACAAGGGGACGGTGGAGCGGGTCACGGGCCCGCGCACCGTGTCGGCCTTCCT CGACAAGGGCGTCCTCTCCGTCCCCGAGTTCATCCTCGCCGGCGACAACCTCGTCTCCAA GTGCCCCACCTGGTCCTGGGAGGCGGGCGATCCGAGCAAGAGGAAGCCGTATCTCCCACC TGACAAGCAATTTCTCGTCACCAGGAACGTGCCTTGCCTAAGACGTGCTGTTTCGCTTGA AGAAGAGTATGATGCAGCAGGAGCTGAGGTAGTTCTCGGTGATGATGAGGACGGTGAAGG CTGGCTTGCCACACATGGAGTGCAAGCATCAAAGCAAGAAGAGGAGGAAGACATACCATC GATGGATACATTGGATATAGGGAAAACTGAAGGGATAAAGTCTATTCCCTCATATTTCAG TGCTGGTAAGAAGGCTGAAGAAGAGGAGGATATACCAGACATGGACACTTATGAAGACTC AGGGAATGATTCAGTGGCTACCGCTCAACCTTCATATTTTGTCGCAGAAGAGCCTGAAGA TGACAACATCCTTCGTACTAGGACATATGACGTTAGCATCACATATGACAAATATTACCA AACCCCACGTGTCTGGCTTACCGGATATGATGAGTCAAGAATGCCACTAAAGCCTGAACT TGTGTTTGAAGATATCAGCCAAGATCATGCACGGAAGACGGTGACTATTGAAGACCATCC TCACTTGTCAGCAGGCAAGCATGCTTCAGTGCATCCATGCAAACATGCTGCTGTGATGAA AAAGATCATTGATGTTCTAATGTCTCAAGGAGTTGAACCAGAAGTTGACAAGTACCTTTT CATATTTTTGAAGTTTATGGCCTCAGTCATACCCACTATTGAATATGACTACACTATGGA CTTCGATCTGGGCAGCACAAGCAGATGATTTGTTAATTGAAGGAAAGGGAAAGATCCTGT AGAAGGTGTACCAAGGCTTATCATGGTGCCCCAAATAATCATTGCTTGTTGGAAAGAATT GTATATGCAATATGTGCGTGCATGTGTGCTCATTCGTTTGGAAAGTAACTGGAAACAATG CAGAAACATCAGGGCTGATTTGCCATGTACATGTAACACTACATACCCGTTTCACTTGAA TTCGTTTGCCTTCCAGATTGAATCCATCTGTTCTTAGATACACGTTGAGTATGCC