Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0199900-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:5406050:5412737:1 gene:Os01g0199900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21) (AIR carboxylase) (AIRC). (Os01t0199900-01)
Sequence	ATGCACTCCAGGCTCCTCAGCGCCCCCTCCCACGCCTCCGCCGCCTCCTCCTCCCCCCTC CCCTTCGCCGCCGCCCACCCTTGCCGCGCCTCCTGGACGCCGCGGCCCACCTCCCCGCTG CCGCCTCTATCGCTGCTGCGCGCCACCGCCTCCATGCATCCTTCTCCTCCTCCCGAGGGG CATAGCGACCAGCCTGTGCATGGCGTCACCAACACGGTCGTCGGCGTGCTGGGGGGAGGC CAGCTGGGGAAGATGCTGTGCCAGGCGGCCAGCCAGATGGGGGTCAGGATGGCCATACTT GATCCCCTCGAGGACTGCCCGGCGAGCTCGGTTTGCCACGAGCATGTCGTCGGGAGCTTC AATGATGGCGCCACGGTTAGCGAGTTCGCAAAGAGGTGCGGGGTTTTGACGGTGGAAATT GAGCATGTCGACGCTGTAACACTCGAGAAGCTTGAGAAACAGGGCATCGATTGTGAGCCC AAAGCCTCCACCATCATGATTATTCAAGACAAGTACAGGCAGAAAACTCATTTCTCAAAA TTTGGAATTCCGTTACCTGACTTTGTGGAAGTAGATACTTTAAGTAGCATAGAGAAAGCT GGGGAAATGTTTGGTTATCCTCTAATGGTCAAAAGCAAGAGATTAGCATATGATGGCCGT GGAAATGCTGTTGCTCACGACAAAAAAGAGCTATCTTCTGTTGTTGCTTCTCTTGGTGGG TTTGAGCATGGCTTGTATGTTGAGAGGTGGACATCTTTTGTAAAGGAGCTTTCTGTCATT GTGGCAAGGAGCAGAGACGGTTCTACGGTGTGCTATCCTGTTGTTGAAACCATCCACAAG GATAACATCTGCCATGTTGTTGAGGCTCCTGCCGAGGTGCCTGATAAAATAAAGAAGTTG GCTACTAATGTAGCTGAAAAGGCTATCAAATCATTGGAAGGTGCTGGTGTTTTCGCTGTA GAATTATTTTTAACACAAGATAATCAGGTTTTATTGAATGAAGTAGCTCCAAGGCCTCAC AACAGTGGGCATCACACAATTGAGTCATGTTATACCTCGCAATATGAGCAACATTTACGT GCTATTCTTGGCCTTCCTCTTGGTGATCCTTCAATGAAAGCGCCTGCATCAATAATGTAC AACATCCTGGGTGAGGATGAGGGTGAGGCAGGATTTACTCAAGCTCATCAGTTGATTGAG AGAGCTTTGGACATTTCAGGTGCATCTGTCCATTGGTATGCAAAACCAGAAATACGGAAG CAGAGAAAGATGGGCCATATTACAATTGTGGGGCCTTCAAAGTACAGTGTAAAAGCACGC TTAGATAAGTTGCTGCAAAGAGACGCATATGACCCCAAGAAAGTTGCAGTTAAACCTCGT GCTGCAATAATAATGGGTTCTGATTCTGATCTTCCTGTCATGAAAGATGCTGCAGTAGTA TTGAAGAAATTCAACATACCTTTTGAGCTTACAATTGTTTCGGCTCATCGTACACCAGAG AGGATGTACCATTATGCATTATCTACTAAAGAAAGAGGCTTAGAGGTCATAATTGCAGGT GCAGGTGGAGCGGCTCACTTACCAGGGATGGTGGCTTCATTGACTTCTGTCCCAGTAATA GGAGTACCCATCATGACTTCATCTTTACATGGAACTGATTCCCTCCTATCTATTGTCCAG ATGCCGAAAGGTATTCCTGTTGCTACTGTTGCAATTGGAAATGCGGAAAATGCAGGTTTA TTGGCAGTTAGGATGCTGGCCTCAAGAGATCCTGAGTTGGGGGACAAGGCAACTGAATAC CAGCATGATCTGAGGGATATGGTGTTGGAGAAAGCAAAAAGGCTCGAGGAACTAGGTTGG GAGGAATATACCGAGCTATACTTGAAGAAGCATTGA

Peptide Sequence

PEP ID	Os01t0199900-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:5406050:5412737:1 gene:Os01g0199900 transcript:Os01t0199900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21) (AIR carboxylase) (AIRC). (Os01t0199900-01)
Sequence	MHSRLLSAPSHASAASSSPLPFAAAHPCRASWTPRPTSPLPPLSLLRATASMHPSPPPEG HSDQPVHGVTNTVVGVLGGGQLGKMLCQAASQMGVRMAILDPLEDCPASSVCHEHVVGSF NDGATVSEFAKRCGVLTVEIEHVDAVTLEKLEKQGIDCEPKASTIMIIQDKYRQKTHFSK FGIPLPDFVEVDTLSSIEKAGEMFGYPLMVKSKRLAYDGRGNAVAHDKKELSSVVASLGG FEHGLYVERWTSFVKELSVIVARSRDGSTVCYPVVETIHKDNICHVVEAPAEVPDKIKKL ATNVAEKAIKSLEGAGVFAVELFLTQDNQVLLNEVAPRPHNSGHHTIESCYTSQYEQHLR AILGLPLGDPSMKAPASIMYNILGEDEGEAGFTQAHQLIERALDISGASVHWYAKPEIRK QRKMGHITIVGPSKYSVKARLDKLLQRDAYDPKKVAVKPRAAIIMGSDSDLPVMKDAAVV LKKFNIPFELTIVSAHRTPERMYHYALSTKERGLEVIIAGAGGAAHLPGMVASLTSVPVI GVPIMTSSLHGTDSLLSIVQMPKGIPVATVAIGNAENAGLLAVRMLASRDPELGDKATEY QHDLRDMVLEKAKRLEELGWEEYTELYLKKH

Transcript Sequence

Transcript ID	Os01t0199900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:5406050:5412737:1 gene:Os01g0199900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21) (AIR carboxylase) (AIRC). (Os01t0199900-01)
Sequence	TTTCCTCCGCCGCCGCCGCCTCCTCCTCCGCTCCGCGCGGCCGTCTCCCACCTCTCGCGC CTCACCTCCTCCTCCTCCTAAACCCTCGCTAAACCCTAGCCTCCCACCCCCCCACCCCAC CGGGGAGCATGCACTCCAGGCTCCTCAGCGCCCCCTCCCACGCCTCCGCCGCCTCCTCCT CCCCCCTCCCCTTCGCCGCCGCCCACCCTTGCCGCGCCTCCTGGACGCCGCGGCCCACCT CCCCGCTGCCGCCTCTATCGCTGCTGCGCGCCACCGCCTCCATGCATCCTTCTCCTCCTC CCGAGGGGCATAGCGACCAGCCTGTGCATGGCGTCACCAACACGGTCGTCGGCGTGCTGG GGGGAGGCCAGCTGGGGAAGATGCTGTGCCAGGCGGCCAGCCAGATGGGGGTCAGGATGG CCATACTTGATCCCCTCGAGGACTGCCCGGCGAGCTCGGTTTGCCACGAGCATGTCGTCG GGAGCTTCAATGATGGCGCCACGGTTAGCGAGTTCGCAAAGAGGTGCGGGGTTTTGACGG TGGAAATTGAGCATGTCGACGCTGTAACACTCGAGAAGCTTGAGAAACAGGGCATCGATT GTGAGCCCAAAGCCTCCACCATCATGATTATTCAAGACAAGTACAGGCAGAAAACTCATT TCTCAAAATTTGGAATTCCGTTACCTGACTTTGTGGAAGTAGATACTTTAAGTAGCATAG AGAAAGCTGGGGAAATGTTTGGTTATCCTCTAATGGTCAAAAGCAAGAGATTAGCATATG ATGGCCGTGGAAATGCTGTTGCTCACGACAAAAAAGAGCTATCTTCTGTTGTTGCTTCTC TTGGTGGGTTTGAGCATGGCTTGTATGTTGAGAGGTGGACATCTTTTGTAAAGGAGCTTT CTGTCATTGTGGCAAGGAGCAGAGACGGTTCTACGGTGTGCTATCCTGTTGTTGAAACCA TCCACAAGGATAACATCTGCCATGTTGTTGAGGCTCCTGCCGAGGTGCCTGATAAAATAA AGAAGTTGGCTACTAATGTAGCTGAAAAGGCTATCAAATCATTGGAAGGTGCTGGTGTTT TCGCTGTAGAATTATTTTTAACACAAGATAATCAGGTTTTATTGAATGAAGTAGCTCCAA GGCCTCACAACAGTGGGCATCACACAATTGAGTCATGTTATACCTCGCAATATGAGCAAC ATTTACGTGCTATTCTTGGCCTTCCTCTTGGTGATCCTTCAATGAAAGCGCCTGCATCAA TAATGTACAACATCCTGGGTGAGGATGAGGGTGAGGCAGGATTTACTCAAGCTCATCAGT TGATTGAGAGAGCTTTGGACATTTCAGGTGCATCTGTCCATTGGTATGCAAAACCAGAAA TACGGAAGCAGAGAAAGATGGGCCATATTACAATTGTGGGGCCTTCAAAGTACAGTGTAA AAGCACGCTTAGATAAGTTGCTGCAAAGAGACGCATATGACCCCAAGAAAGTTGCAGTTA AACCTCGTGCTGCAATAATAATGGGTTCTGATTCTGATCTTCCTGTCATGAAAGATGCTG CAGTAGTATTGAAGAAATTCAACATACCTTTTGAGCTTACAATTGTTTCGGCTCATCGTA CACCAGAGAGGATGTACCATTATGCATTATCTACTAAAGAAAGAGGCTTAGAGGTCATAA TTGCAGGTGCAGGTGGAGCGGCTCACTTACCAGGGATGGTGGCTTCATTGACTTCTGTCC CAGTAATAGGAGTACCCATCATGACTTCATCTTTACATGGAACTGATTCCCTCCTATCTA TTGTCCAGATGCCGAAAGGTATTCCTGTTGCTACTGTTGCAATTGGAAATGCGGAAAATG CAGGTTTATTGGCAGTTAGGATGCTGGCCTCAAGAGATCCTGAGTTGGGGGACAAGGCAA CTGAATACCAGCATGATCTGAGGGATATGGTGTTGGAGAAAGCAAAAAGGCTCGAGGAAC TAGGTTGGGAGGAATATACCGAGCTATACTTGAAGAAGCATTGATCTCTGCTGCCCGTTT AATTGACATTCTTTTTGATCCAGTGTTGACATAAGCAGATATGGTCCATGTGGAGGCCTG GAGAGGGCGTGCCGACTTACGAAGTGAAAGATGTCGACGAAACACGGCGCATGAGCATCT CAGTAGCAGAAAGCTTTGCTTGTATAACTGTAACAACATGCCTGCCTGAAATGTTCATGT GGATCTTATGATGATATTTCAGGGAAAAAAATCAACCAATTTTAACGAGTTCTG