Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0199300-00
CDS Infomation

cds chromosome:IRGSP-1.0:1:5384196:5385088:1 gene:Os01g0199300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to lachrymatory factor synthase. (Os01t0199300-00)
Sequence

ATGGAGGAGCAGCAGCGGCCGGTGCAGCCCGCCGGCGGCGGCGGCGGCGGTGGCGCGCCG
CCAGAAGAGCAGTGGCGCGGCGCCGTGGAGGCGGCGCTCCCGGGAACGCCGGCGTCCGCC
GCGTGGCCGCACGTCGCCAGCTTCTACGCCGCGCACCGCTACCTCCCTGGCATCGACGTG
TGCGAGCGCGTCGGCGACGGCGGCGAGGATGGTGGCCTCCTCCTCGTCCCCGGGTGCGTC
CGGCACGTGGCGTCGAGCGCGGCGGGGCTGTGGGCGCGGGAGGAGCTCCTAGAGGCGCCG
GACCACGCGGCGCGGCGCCTCCGGTACGCCGTCGTCGACAGCAACATGGGGTTCGGCCGC
TACGTCGCCACGCTCCGCGTCCTCGACGGCGGCAGCGGGTGCCGCATCGCGTGGGCGTTC
GAGTGCGACGCCGTGTGCGGCGAGGGGTGGAGCGAGGCGGCGCTGGTGGCGCGGCTCGCC
GCCAGCGTGGACGGCATGGCCGAGAGGGTGCAGCAAGCCGTGGCGGCGGAGGCCGAGGCG
CGCGCCGGAGAAGAAGAAGAAGACGGAGTCGCTGGGTGA

Peptide Sequence

PEP ID

Os01t0199300-00
PEP Infomation

pep chromosome:IRGSP-1.0:1:5384196:5385088:1 gene:Os01g0199300 transcript:Os01t0199300-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to lachrymatory factor synthase. (Os01t0199300-00)
Sequence

MEEQQRPVQPAGGGGGGGAPPEEQWRGAVEAALPGTPASAAWPHVASFYAAHRYLPGIDV
CERVGDGGEDGGLLLVPGCVRHVASSAAGLWAREELLEAPDHAARRLRYAVVDSNMGFGR
YVATLRVLDGGSGCRIAWAFECDAVCGEGWSEAALVARLAASVDGMAERVQQAVAAEAEA
RAGEEEEDGVAG

Transcript Sequence

Transcript ID

Os01t0199300-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:5384196:5385088:1 gene:Os01g0199300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to lachrymatory factor synthase. (Os01t0199300-00)
Sequence

GTCGCAGGTCAACACACGACTGTAGGCACGTGCAACAAGCTAGATGGAGGAGCAGCAGCG
GCCGGTGCAGCCCGCCGGCGGCGGCGGCGGCGGTGGCGCGCCGCCAGAAGAGCAGTGGCG
CGGCGCCGTGGAGGCGGCGCTCCCGGGAACGCCGGCGTCCGCCGCGTGGCCGCACGTCGC
CAGCTTCTACGCCGCGCACCGCTACCTCCCTGGCATCGACGTGTGCGAGCGCGTCGGCGA
CGGCGGCGAGGATGGTGGCCTCCTCCTCGTCCCCGGGTGCGTCCGGCACGTGGCGTCGAG
CGCGGCGGGGCTGTGGGCGCGGGAGGAGCTCCTAGAGGCGCCGGACCACGCGGCGCGGCG
CCTCCGGTACGCCGTCGTCGACAGCAACATGGGGTTCGGCCGCTACGTCGCCACGCTCCG
CGTCCTCGACGGCGGCAGCGGGTGCCGCATCGCGTGGGCGTTCGAGTGCGACGCCGTGTG
CGGCGAGGGGTGGAGCGAGGCGGCGCTGGTGGCGCGGCTCGCCGCCAGCGTGGACGGCAT
GGCCGAGAGGGTGCAGCAAGCCGTGGCGGCGGAGGCCGAGGCGCGCGCCGGAGAAGAAGA
AGAAGACGGAGTCGCTGGGTGACGTCAACGTCGCCATGGCGGGGGCGGCGTCTGGTTCGG
CGTGTCTTTGTCGTGTCAGGACGTCGCGCGTGCGTTGCGTGCAAGGTGGCTGATTGATAG
AGAGATTTTCTGTCGCTTTTTTTTTTTTACTGTAGTGCTACCATGGATCGATCAGCGGCG
GTGATGATCTCTACATGAAATTTATCTCGTGCCACTATTAGGTCGTTTTCATTTTTGCGA
TAGCTTTTCATGGAAAAATATTATAAGAAAAAAATTGTGTATAAAGTTTTATA