Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0198500-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:5352505:5353607:-1 gene:Os01g0198500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0198500-01)
Sequence

ATGGAGCCCGGGTTCGGGAAGCGGCTGATGCACGTGCTGCGCGCGGTGTACCACATGCTG
CGGCGCGGGCTGTGCCGGAAGCGCCTCATGATGGACCTCCACCTGCTCCTCGGCCGGGGC
AAGCTCGCCGGCAGGGCGCTCCGCGACGTCCTCCTCGCCCACCAGCCGCACGGCGGCGCG
GCTGCCGTGGCGGTCATGGGAGGCGGCGCCGGGGTGGCGCGGGGTGGTGACTCGTCGTCG
TCGCCGCTGTCGGCGTCGTTCTTCCACCACAACCCCAGGGACGTGGAGTTCAGCTGCACC
ACCACGCCGTCCTACGCGCCGGGGGTCTTCCCCTTCAGGTTCCGCGGCCGCGGCGGCTCA
CGCCACGCCGGCGGCGGCGCCAGCAACTACGGCGGGCTCGACGCCTCCGCCGTGGCCCGC
GTCTTCGAGATGCTCAACGCCGACGCCGCGGCTGCTGCTGGCGCCGGCGGGGAGACGCCG
CTGTCGTCGATGCCCGGCGCCACGCCGTCCCCGTTGCTGGCGCTCAGCCTCGGCCGCAGC
CCCGCCGGGACGCGGCAGCTCCGCGTCACCGACTCGCCGTTCCCCGTCGAGCCGCCGGAG
GGCGCCGTCGACGGCCGCGTCGACGACAAGGCCACCGACTTCATCGAGTGGTTCCGCCGC
CAGCTCCTCCAGCAGCAGGCGTCCGCCGCGCCAACGCCGGACTACCGTGGCTAG

Peptide Sequence

PEP ID

Os01t0198500-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:5352505:5353607:-1 gene:Os01g0198500 transcript:Os01t0198500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0198500-01)
Sequence

MEPGFGKRLMHVLRAVYHMLRRGLCRKRLMMDLHLLLGRGKLAGRALRDVLLAHQPHGGA
AAVAVMGGGAGVARGGDSSSSPLSASFFHHNPRDVEFSCTTTPSYAPGVFPFRFRGRGGS
RHAGGGASNYGGLDASAVARVFEMLNADAAAAAGAGGETPLSSMPGATPSPLLALSLGRS
PAGTRQLRVTDSPFPVEPPEGAVDGRVDDKATDFIEWFRRQLLQQQASAAPTPDYRG

Transcript Sequence

Transcript ID

Os01t0198500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:5352505:5353607:-1 gene:Os01g0198500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0198500-01)
Sequence

ATCCACCACCCACCCATCCAACACCACCCTTCTCCAAAGCTGCAAAATCCAAAGCGAGAA
ACCGCCATTGCCACCCACCTCGATTCCGCTCTCGATCTCAGCTCACTGCTGCATTGCGGC
TGTCGCTGTCAGCTCGGATCGGCGCCACGGAGGCCACCGCGGACAGGAGGGCCGTGCAGC
CGGCCGGCGGCGGCATGGAGCCCGGGTTCGGGAAGCGGCTGATGCACGTGCTGCGCGCGG
TGTACCACATGCTGCGGCGCGGGCTGTGCCGGAAGCGCCTCATGATGGACCTCCACCTGC
TCCTCGGCCGGGGCAAGCTCGCCGGCAGGGCGCTCCGCGACGTCCTCCTCGCCCACCAGC
CGCACGGCGGCGCGGCTGCCGTGGCGGTCATGGGAGGCGGCGCCGGGGTGGCGCGGGGTG
GTGACTCGTCGTCGTCGCCGCTGTCGGCGTCGTTCTTCCACCACAACCCCAGGGACGTGG
AGTTCAGCTGCACCACCACGCCGTCCTACGCGCCGGGGGTCTTCCCCTTCAGGTTCCGCG
GCCGCGGCGGCTCACGCCACGCCGGCGGCGGCGCCAGCAACTACGGCGGGCTCGACGCCT
CCGCCGTGGCCCGCGTCTTCGAGATGCTCAACGCCGACGCCGCGGCTGCTGCTGGCGCCG
GCGGGGAGACGCCGCTGTCGTCGATGCCCGGCGCCACGCCGTCCCCGTTGCTGGCGCTCA
GCCTCGGCCGCAGCCCCGCCGGGACGCGGCAGCTCCGCGTCACCGACTCGCCGTTCCCCG
TCGAGCCGCCGGAGGGCGCCGTCGACGGCCGCGTCGACGACAAGGCCACCGACTTCATCG
AGTGGTTCCGCCGCCAGCTCCTCCAGCAGCAGGCGTCCGCCGCGCCAACGCCGGACTACC
GTGGCTAGCCCGCCGACCGCCGCCGCCATCGCCGCCGCGGCATGGGCGAGCGAGCGCGAA
TACTAAAGCACGAGAAGCTTATATATATATATAAGGGACTATGTGGCGTCAAAATTGTTT
CACTGACATGTGGGTTTCGAGTTTTTCTACCTGCATGGCTGCGTGTAATTTTTCCTCGGT
TAATTAATTTCCTCGCTTGTGAT