Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0198200-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:5329096:5333540:-1 gene:Os01g0198200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Casein kinase-like protein. (Os01t0198200-01);Similar to predicted protein. (Os01t0198200-02);Similar to predicted protein. (Os01t0198200-03)
Sequence	CATGGTGTCCCACGGGTACACTACAAAGGAAAGCAGGGCGGGTTTTACATCATGGTTATG GATATGTTGGGACCGAGCCTGTGGGATGTTTGGAATAACAATTCCCACTCGATGTCTGTT GAGATGGTTGCTTGTATAGGTATAGAGGCCATCTCCATACTAGAGAAGATGCATGCTAAA GGGTACGTCCATGGTGATGTGAAACCTGAGAACTTTTTGCTTGGTCCTCCAGATACCCCT GAAGGGAAGAAACTTTTTCTTGTTGATCTTGGACTAGCTACTAAATGGAAAGATGCTGGT ACAGGAAAGCATGTTGAATATGACCAGAGACCTGATATCTTTAGGGGTACTGTTCGTTAT GCTAGTGTGCATGCCCACTTGGGAAGAACTGGATGCAGGAGAGATGACCTTGAATCCCTT GCATACACACTTATTTTCCTTCTCCGTGGCCGCCTGCCTTGGCAAGGATTCCAGGGAGAG AATAAAGGTTTTCTTGTTTGCAAGAAAAAGATGGCAACCTCTCCAGAATCTTTATGTGGC ATTGGTCCACCACCATTTCGTCAATTTGTTGAGTATGTTGTGAACTTGAAGTTCGACGAA GAGCCAAACTATGCAAAGTGCATTGCTCTTTTTGATGGCATTGTTGGTCCAAATCCAGAT GGAAGACCATTAAACACCGATGGTGCCCAGAAGCTTGTATATCAGGTTGGTCAGAAGAGA GGCCGCCTCACAGCGGCTGAAGATGAGGAGCAACCTAAGAAAAAGATTAGAATGGGAATG CCAGCGACCCAGTGGATTAGTGTGTACAATGCCCGTCGGCCAATGAAACAGAGATACCAC TACAATGTAGCAGATGATAGATTAGCACCACATATTCAAAAAGGAAATGAAGATGGTTTG TTTATAAGTTCAGTTTCATCCTGTTCAGATCTGTGGGCTTTAATTATGGATGCTGGCACT GGTTTTACCGCCCAAGTACATGAACTCTCCCATTACTTTCTTCACAAGGAATGGATAATG GAGCAGTGGGAGAGAAATTACTATATTACTTCTTTGGCTGGTTCAAATAATGGAAGCTCG GTGGTGATCATGTCAACAGGAACGCCATATGCACAGCAATCCTACAAAGTAAGTGATTCA TTTCCCTTCAAATGGATAAACAAAAAGTGGAAGGAGGGGTTCTATGTCACTGCCTTGGCC ACAGCAGGAAGCCGATGGGCTGTGGTTATGTCCCGGAACGCTGGTTTCACACATCAGGTA GTAGAACTTGATTTCTTATATCCGAGTGAAGGAATCCATCAACGCTGGGATAGTGGTTAT CGCATAACTGCAACAGCAGCCACATGTGACCAGGTGGCTTTGATCTTGAGCATACCTAGA AGAAAGCCTAACGATGAAACACAGGAGACACTGAGAACATCTGCTTTTCCTGGCCAGCAT GTAAAGGAAAAATGGGCAAAAAATCTTTATTTAGGCTCCATATGCTATGGAAGATCAGTG TCGTGA

Peptide Sequence

PEP ID	Os01t0198200-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:5329096:5333540:-1 gene:Os01g0198200 transcript:Os01t0198200-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Casein kinase-like protein. (Os01t0198200-01);Similar to predicted protein. (Os01t0198200-02);Similar to predicted protein. (Os01t0198200-03)
Sequence	HGVPRVHYKGKQGGFYIMVMDMLGPSLWDVWNNNSHSMSVEMVACIGIEAISILEKMHAK GYVHGDVKPENFLLGPPDTPEGKKLFLVDLGLATKWKDAGTGKHVEYDQRPDIFRGTVRY ASVHAHLGRTGCRRDDLESLAYTLIFLLRGRLPWQGFQGENKGFLVCKKKMATSPESLCG IGPPPFRQFVEYVVNLKFDEEPNYAKCIALFDGIVGPNPDGRPLNTDGAQKLVYQVGQKR GRLTAAEDEEQPKKKIRMGMPATQWISVYNARRPMKQRYHYNVADDRLAPHIQKGNEDGL FISSVSSCSDLWALIMDAGTGFTAQVHELSHYFLHKEWIMEQWERNYYITSLAGSNNGSS VVIMSTGTPYAQQSYKVSDSFPFKWINKKWKEGFYVTALATAGSRWAVVMSRNAGFTHQV VELDFLYPSEGIHQRWDSGYRITATAATCDQVALILSIPRRKPNDETQETLRTSAFPGQH VKEKWAKNLYLGSICYGRSVS

Transcript Sequence

Transcript ID	Os01t0198200-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:5329096:5333540:-1 gene:Os01g0198200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Casein kinase-like protein. (Os01t0198200-01);Similar to predicted protein. (Os01t0198200-02);Similar to predicted protein. (Os01t0198200-03)
Sequence	ATCATGGTGTCCCACGGGTACACTACAAAGGAAAGCAGGGCGGGTTTTACATCATGGTTA TGGATATGTTGGGACCGAGCCTGTGGGATGTTTGGAATAACAATTCCCACTCGATGTCTG TTGAGATGGTTGCTTGTATAGGTATAGAGGCCATCTCCATACTAGAGAAGATGCATGCTA AAGGGTACGTCCATGGTGATGTGAAACCTGAGAACTTTTTGCTTGGTCCTCCAGATACCC CTGAAGGGAAGAAACTTTTTCTTGTTGATCTTGGACTAGCTACTAAATGGAAAGATGCTG GTACAGGAAAGCATGTTGAATATGACCAGAGACCTGATATCTTTAGGGGTACTGTTCGTT ATGCTAGTGTGCATGCCCACTTGGGAAGAACTGGATGCAGGAGAGATGACCTTGAATCCC TTGCATACACACTTATTTTCCTTCTCCGTGGCCGCCTGCCTTGGCAAGGATTCCAGGGAG AGAATAAAGGTTTTCTTGTTTGCAAGAAAAAGATGGCAACCTCTCCAGAATCTTTATGTG GCATTGGTCCACCACCATTTCGTCAATTTGTTGAGTATGTTGTGAACTTGAAGTTCGACG AAGAGCCAAACTATGCAAAGTGCATTGCTCTTTTTGATGGCATTGTTGGTCCAAATCCAG ATGGAAGACCATTAAACACCGATGGTGCCCAGAAGCTTGTATATCAGGTTGGTCAGAAGA GAGGCCGCCTCACAGCGGCTGAAGATGAGGAGCAACCTAAGAAAAAGATTAGAATGGGAA TGCCAGCGACCCAGTGGATTAGTGTGTACAATGCCCGTCGGCCAATGAAACAGAGATACC ACTACAATGTAGCAGATGATAGATTAGCACCACATATTCAAAAAGGAAATGAAGATGGTT TGTTTATAAGTTCAGTTTCATCCTGTTCAGATCTGTGGGCTTTAATTATGGATGCTGGCA CTGGTTTTACCGCCCAAGTACATGAACTCTCCCATTACTTTCTTCACAAGGAATGGATAA TGGAGCAGTGGGAGAGAAATTACTATATTACTTCTTTGGCTGGTTCAAATAATGGAAGCT CGGTGGTGATCATGTCAACAGGAACGCCATATGCACAGCAATCCTACAAAGTAAGTGATT CATTTCCCTTCAAATGGATAAACAAAAAGTGGAAGGAGGGGTTCTATGTCACTGCCTTGG CCACAGCAGGAAGCCGATGGGCTGTGGTTATGTCCCGGAACGCTGGTTTCACACATCAGG TAGTAGAACTTGATTTCTTATATCCGAGTGAAGGAATCCATCAACGCTGGGATAGTGGTT ATCGCATAACTGCAACAGCAGCCACATGTGACCAGGTGGCTTTGATCTTGAGCATACCTA GAAGAAAGCCTAACGATGAAACACAGGAGACACTGAGAACATCTGCTTTTCCTGGCCAGC ATGTAAAGGAAAAATGGGCAAAAAATCTTTATTTAGGCTCCATATGCTATGGAAGATCAG TGTCGTGAAGTGCATTTTCCCGAGCTGGTCCTTTGTAAGATTAAGATCTAATAATATGAA CAACCGGTTTTGTGACAAGAT