Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0197450-00
CDS Infomation	cds chromosome:IRGSP-1.0:1:5261189:5263102:-1 gene:Os01g0197450 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os01t0197450-00)
Sequence	ATGCGCTGTCTCCTTCGCGCTCGCGGCTCTACCTCTCGTCCCAGCCATCGGCCTCGCGGC GCGCGCCATCTCTCCACCGCCGCCGGCGACCAACCGATCCACCATCACCACCCTCCGACC ACCAGCGCCGTCCCATGGAATCGCCTCCTCCGCGCCCACCTCGGCCGTTCCCGCGGGGAC CTCGCCCTCGCGCTCTACCGCCGCATGCGCGCGCTCTCCCCGGCGCTGCCGAACTCCTAC ACGCTCCCCCTCGCCCTCCGCGCCGCCGCCTCCCCGCGCGTCGCCTCCGCCGTCCACGCC CACGCCCTTCACCTCGGCCTCCACGCGCAGCACGACGTCGCCGGCCAGATCCTCGCCGCC TACTCCAGGCTCGGCCGCGCCGCCGACGCACGCCGCGTGTTCGACGCAATGCCGCCGGGG AGGACGACCTTCCACTGGAACGCGCTCATCTCCGCCTACTCCAGCGGCTGCGACCCCGAC GCGGCGAGGGACGCGTTCGCGCGCATGGCCGCCGCAGGGGCGCGTCCCGACGCCGTGACG TGGACGGCGCTGCTCTCGGCGCACGCGCGGAGCGGGAAGCACGCGGATGTCCTTCAGCTG TTCGGTGAAATGCAAAGGAGCGGCTGCGAGGGGAACGCCGAGTCCATGGCCGTGGCGCTC TCGGCGTGCCCTTACGCCGGCGACCTTGCATTGGCCAAAGGGAAGGCGATACACGGCTGC GGCGTCGTGAAGGGCCTCATGCATGGCTACCTGTTCGTCACCAACTCGTTGATCTGCATG TACGGCAAGCTCGGAGAGATGGACGACGCCAAGAAAGCTTTCAGGGACGCGACGGCGAAG AACACCGTGACATGGAACACCCTGATCACCAGCTACGCCGCGGCTCGGCTGTGCGACAAG GCGTTGGACGTGCTCGCCCAGATGGAGCAGATCGGCGGCACGGTCGCGCCCAATGTGGTC AGCTGGAGCGCGGTCATCGGCGGGTTCGCGTCGTCCGGCGACACTGACCGCGCACTGGAG CTGTTCCGGCGAATGCAGCAGCAATGGCTCTCGCCGAACGTGGTGACCATGGCGACCGTC CTCTCCGCTTGCGTCGACCTACTGGCGTTACGGCTGGGTCGAGAGCTCCATGGCCACGCC ATGAAAGCCGAGCTAGATAGGCACTCGCTGGTCGAGAATGGGCTCATCAACATGTACGCG AAGTGCGGGAAGGTCTCCGGCGCACGGAAGGTGTTCGATGGAATGAAGACGAGGGACCTG ATCTCATGGAACTCGATGCTGGCCGGCTACGGCATGCACGGCCTGTGCGACGAAGCCCTC GCTCTGTTCACCGACATGGCCGGAGCTACGGTTGAGCCCGACGGCGTCACCTTCGTCGCC GTCCTGTCGGCGTGCGGCCACGCCGGGCGTGTCACGGAGGGCCGCCGCCTGTTCGATCGC ATGGTGAGAGCGCACAAGATCTCCCCATCCATGGAGCACTACACATGCATGGTCTACCTC CTCGGCCGCGCCGGCTTGCTCCGGGACGCGTCGGAGCTCGTCGAGACGATGCCGGTGAGA CCTGACCTGTGCGTGTGGGGAGCATTGCTGAATTCCTGCAGGATTCATGGTGATGCAGCC ATGGCCGAGGCCACCATTGCCAATGTCCTGCAATCCGAGGACCAGAGCACCGGCAACCAC ATGCTGATCACCAACCTGTACGCCATGTGTGGCATGTGGGACGAGTCCAAGAAGGTGAGG GTGATGACGAAGGAGGCCGGATTGAGGAAGAATCCGGGGCAGAGCTGGATTGAAGTGGAC AACAAGGTGGTCGCCTTCGCCGCCGGGAGCGCGCCGCCGAATCTCACCGGAGCTGAGGAT GTCTTCGGAATGCTCGATGATCTATATGCAGAGATGGAAGATGAACAAAGATGA

Peptide Sequence

PEP ID	Os01t0197450-00
PEP Infomation	pep chromosome:IRGSP-1.0:1:5261189:5263102:-1 gene:Os01g0197450 transcript:Os01t0197450-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os01t0197450-00)
Sequence	MRCLLRARGSTSRPSHRPRGARHLSTAAGDQPIHHHHPPTTSAVPWNRLLRAHLGRSRGD LALALYRRMRALSPALPNSYTLPLALRAAASPRVASAVHAHALHLGLHAQHDVAGQILAA YSRLGRAADARRVFDAMPPGRTTFHWNALISAYSSGCDPDAARDAFARMAAAGARPDAVT WTALLSAHARSGKHADVLQLFGEMQRSGCEGNAESMAVALSACPYAGDLALAKGKAIHGC GVVKGLMHGYLFVTNSLICMYGKLGEMDDAKKAFRDATAKNTVTWNTLITSYAAARLCDK ALDVLAQMEQIGGTVAPNVVSWSAVIGGFASSGDTDRALELFRRMQQQWLSPNVVTMATV LSACVDLLALRLGRELHGHAMKAELDRHSLVENGLINMYAKCGKVSGARKVFDGMKTRDL ISWNSMLAGYGMHGLCDEALALFTDMAGATVEPDGVTFVAVLSACGHAGRVTEGRRLFDR MVRAHKISPSMEHYTCMVYLLGRAGLLRDASELVETMPVRPDLCVWGALLNSCRIHGDAA MAEATIANVLQSEDQSTGNHMLITNLYAMCGMWDESKKVRVMTKEAGLRKNPGQSWIEVD NKVVAFAAGSAPPNLTGAEDVFGMLDDLYAEMEDEQR

Transcript Sequence

Transcript ID	Os01t0197450-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:5261189:5263102:-1 gene:Os01g0197450 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os01t0197450-00)
Sequence	ATGCGCTGTCTCCTTCGCGCTCGCGGCTCTACCTCTCGTCCCAGCCATCGGCCTCGCGGC GCGCGCCATCTCTCCACCGCCGCCGGCGACCAACCGATCCACCATCACCACCCTCCGACC ACCAGCGCCGTCCCATGGAATCGCCTCCTCCGCGCCCACCTCGGCCGTTCCCGCGGGGAC CTCGCCCTCGCGCTCTACCGCCGCATGCGCGCGCTCTCCCCGGCGCTGCCGAACTCCTAC ACGCTCCCCCTCGCCCTCCGCGCCGCCGCCTCCCCGCGCGTCGCCTCCGCCGTCCACGCC CACGCCCTTCACCTCGGCCTCCACGCGCAGCACGACGTCGCCGGCCAGATCCTCGCCGCC TACTCCAGGCTCGGCCGCGCCGCCGACGCACGCCGCGTGTTCGACGCAATGCCGCCGGGG AGGACGACCTTCCACTGGAACGCGCTCATCTCCGCCTACTCCAGCGGCTGCGACCCCGAC GCGGCGAGGGACGCGTTCGCGCGCATGGCCGCCGCAGGGGCGCGTCCCGACGCCGTGACG TGGACGGCGCTGCTCTCGGCGCACGCGCGGAGCGGGAAGCACGCGGATGTCCTTCAGCTG TTCGGTGAAATGCAAAGGAGCGGCTGCGAGGGGAACGCCGAGTCCATGGCCGTGGCGCTC TCGGCGTGCCCTTACGCCGGCGACCTTGCATTGGCCAAAGGGAAGGCGATACACGGCTGC GGCGTCGTGAAGGGCCTCATGCATGGCTACCTGTTCGTCACCAACTCGTTGATCTGCATG TACGGCAAGCTCGGAGAGATGGACGACGCCAAGAAAGCTTTCAGGGACGCGACGGCGAAG AACACCGTGACATGGAACACCCTGATCACCAGCTACGCCGCGGCTCGGCTGTGCGACAAG GCGTTGGACGTGCTCGCCCAGATGGAGCAGATCGGCGGCACGGTCGCGCCCAATGTGGTC AGCTGGAGCGCGGTCATCGGCGGGTTCGCGTCGTCCGGCGACACTGACCGCGCACTGGAG CTGTTCCGGCGAATGCAGCAGCAATGGCTCTCGCCGAACGTGGTGACCATGGCGACCGTC CTCTCCGCTTGCGTCGACCTACTGGCGTTACGGCTGGGTCGAGAGCTCCATGGCCACGCC ATGAAAGCCGAGCTAGATAGGCACTCGCTGGTCGAGAATGGGCTCATCAACATGTACGCG AAGTGCGGGAAGGTCTCCGGCGCACGGAAGGTGTTCGATGGAATGAAGACGAGGGACCTG ATCTCATGGAACTCGATGCTGGCCGGCTACGGCATGCACGGCCTGTGCGACGAAGCCCTC GCTCTGTTCACCGACATGGCCGGAGCTACGGTTGAGCCCGACGGCGTCACCTTCGTCGCC GTCCTGTCGGCGTGCGGCCACGCCGGGCGTGTCACGGAGGGCCGCCGCCTGTTCGATCGC ATGGTGAGAGCGCACAAGATCTCCCCATCCATGGAGCACTACACATGCATGGTCTACCTC CTCGGCCGCGCCGGCTTGCTCCGGGACGCGTCGGAGCTCGTCGAGACGATGCCGGTGAGA CCTGACCTGTGCGTGTGGGGAGCATTGCTGAATTCCTGCAGGATTCATGGTGATGCAGCC ATGGCCGAGGCCACCATTGCCAATGTCCTGCAATCCGAGGACCAGAGCACCGGCAACCAC ATGCTGATCACCAACCTGTACGCCATGTGTGGCATGTGGGACGAGTCCAAGAAGGTGAGG GTGATGACGAAGGAGGCCGGATTGAGGAAGAATCCGGGGCAGAGCTGGATTGAAGTGGAC AACAAGGTGGTCGCCTTCGCCGCCGGGAGCGCGCCGCCGAATCTCACCGGAGCTGAGGAT GTCTTCGGAATGCTCGATGATCTATATGCAGAGATGGAAGATGAACAAAGATGA