Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0197400-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:5258298:5260964:1 gene:Os01g0197400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0197400-01)
Sequence

ATGAGGACTTCCCTTGTTCGTTTCTTCCTTACTATCCTCGCCAACACGTTTCTCCATTCC
CCCTACCAGCACTCCTCACCTCCTGAATCATCCCAATGTTCGACGCCGCTTGGTAGCGAG
AGTGGAGGAAAGAGGAGGCGGGGGAGGAGGGGGAAGCAGAAGGGCTTGGGTGAGGTGGTG
TCTGTTCACGAGAAAAAGGAGGCAAAAACATCACCTTTCCCCCTCCTGCTGTTGTGCCGT
GCAACGAGACGGCGGATCACAGAGGTGTATGATGAGATGTACCAAATTGTTCGTGCTAAA
AGGAATGATACTGGCAAGGTTCACGAGTTCATTAACTGTTTGGTAGATGCAAGAAATGAA
CTGCTGCACAAGTCGGAGATGGTTCAAAGAAGCTGCAGAATAAAGAAGGCCTTACTATCC
AACCCTTGTAGTCGCAGGGCTAACAGTTATGACCGCCTCTGCGAACAGGTGCATAAATTG
GAAGCCGAGCACAAAAGGCTAAAGAAGGATGCGGATATCTACAACTATATTCAAGAGCAG
CTTCAGATGTCAGAGTCATACAAACTGTTGATTGAGCTTAGTGCGTTGGTGGAGAAGGCC
GAACGTGAGGATGCCCTTGCCACCGAGGCCGCAGAGATGACATTCGAGGAGCTGCTGGCT
CAGGAGAAGAGCGACGCCGCCTTCTGGCAGCGTCACAGGAAGCTGACCTCAATCTTACCC
AAGTAG

Peptide Sequence

PEP ID

Os01t0197400-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:5258298:5260964:1 gene:Os01g0197400 transcript:Os01t0197400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0197400-01)
Sequence

MRTSLVRFFLTILANTFLHSPYQHSSPPESSQCSTPLGSESGGKRRRGRRGKQKGLGEVV
SVHEKKEAKTSPFPLLLLCRATRRRITEVYDEMYQIVRAKRNDTGKVHEFINCLVDARNE
LLHKSEMVQRSCRIKKALLSNPCSRRANSYDRLCEQVHKLEAEHKRLKKDADIYNYIQEQ
LQMSESYKLLIELSALVEKAEREDALATEAAEMTFEELLAQEKSDAAFWQRHRKLTSILP
K

Transcript Sequence

Transcript ID

Os01t0197400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:5258298:5260964:1 gene:Os01g0197400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0197400-01)
Sequence

GAGGGTTCGCCTCCGATCTTCTGCCGGAACCCATAGCCATGAGGACTTCCCTTGTTCGTT
TCTTCCTTACTATCCTCGCCAACACGTTTCTCCATTCCCCCTACCAGCACTCCTCACCTC
CTGAATCATCCCAATGTTCGACGCCGCTTGGTAGCGAGAGTGGAGGAAAGAGGAGGCGGG
GGAGGAGGGGGAAGCAGAAGGGCTTGGGTGAGGTGGTGTCTGTTCACGAGAAAAAGGAGG
CAAAAACATCACCTTTCCCCCTCCTGCTGTTGTGCCGTGCAACGAGACGGCGGATCACAG
AGGTGTATGATGAGATGTACCAAATTGTTCGTGCTAAAAGGAATGATACTGGCAAGGTTC
ACGAGTTCATTAACTGTTTGGTAGATGCAAGAAATGAACTGCTGCACAAGTCGGAGATGG
TTCAAAGAAGCTGCAGAATAAAGAAGGCCTTACTATCCAACCCTTGTAGTCGCAGGGCTA
ACAGTTATGACCGCCTCTGCGAACAGGTGCATAAATTGGAAGCCGAGCACAAAAGGCTAA
AGAAGGATGCGGATATCTACAACTATATTCAAGAGCAGCTTCAGATGTCAGAGTCATACA
AACTGTTGATTGAGCTTAGTGCGTTGGTGGAGAAGGCCGAACGTGAGGATGCCCTTGCCA
CCGAGGCCGCAGAGATGACATTCGAGGAGCTGCTGGCTCAGGAGAAGAGCGACGCCGCCT
TCTGGCAGCGTCACAGGAAGCTGACCTCAATCTTACCCAAGTAGAGTTTGATAACTGACC
GCGCGATTTCACCATCGTCAATAGTAGCCCGAACCCGTAACCAGAATTTGTTCCTGGTGG
AGCTTTTAATGTTGCTAGTTGCAACCGTGGTGTAATGCGCTTGCCAAGCTCTTGGGCGCC
TGAAAGTCCAGAGTCCTTGACCATAAAACCTGAGAGATTCAGGTGGTTGGCTGACGACCA
GCAAATGCTCTCATATATCCTATCTGGTACTTCGGCC