Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0197200-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:5247340:5251192:-1 gene:Os01g0197200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RNA helicase 20 description:Similar to predicted protein. (Os01t0197200-01)
Sequence	ATGAGCCGCTTCGACGGCCGCGCCGCGGACCCCGGCTCGTACCGCGACCGCCGCAGCGAA GGGGCGTTCGGGGGCGGGACGAGGGCGTTCGCCCCGACGAGCAAGGCGGACTCCGCGGCC GCGGCCGCTGACCTGGATGGGCTGCCGCGGTTCGAGAAGAACTTCTACGTGGAGTCCCCC TCCGTGGCCGGCATGACGGAGGAGGAGGTGGAGGCCTACCGGCGCCGCCGGGAGATCACC GTGGAGGGCCGCGACGTGCCCAAGCCAGTGCGCGAGTTCCGCGATGTCGGATTCCCAGAA TATGTTTTGCAAGAAATTACAAAAGCTGGGTTTGTAGAACCTACTCCTATCCAGTCTCAA GGTTGGCCAATGGCACTGAGGGGACGTGATCTTATTGGCATTGCTGAAACAGGATCAGGG AAAACACTTGCTTACCTTTTACCTGCCATTGTTCATGTTAATGCTCAGCCGATTCTAGCA CCTGGCGATGGTCCAATTGTTCTGGTGTTAGCCCCTACACGTGAACTTGCTGTGCAGATA CAGCAAGAGGCAACTAAGTTTGGTGCGTCATCAAAAATAAAAAGTACTTGCATATATGGT GGTGTTCCAAAAGGTCCTCAAGTTCGCGATCTTCAAAAAGGCGTTGAAATTGTTATAGCC ACGCCAGGAAGACTGATTGATATGATAGAATCACATCATACAAATTTGCGGAGGGTCACT TACCTTGTTTTAGATGAGGCAGACCGGATGCTGGATATGGGCTTTGAACCTCAGATTAAG AAAATTGTTTCTCAGATTCGTCCAGATCGCCAAACATTATATTGGAGTGCTACTTGGCCA AAGGAAGTTGAACAGCTAGCAAGGAACTTTCTTTTCGACCCATACAAGGTCATAATTGGT TCTGAGGAGTTGAAAGCTAATCATGCCATTTCTCAACATGTGGAGATATTATCCGAGAGT CAGAAGTACAATAAGTTGGTTAATCTACTGGAGGATATAATGGATGGCAGCCGGATATTA ATATTTATGGACACGAAGAAGGGATGTGATCAAATCACTAGACAGCTTCGGATGGATGGT TGGCCTGCTCTGTCTATCCATGGTGACAAAAGCCAAGCTGAGAGGGATTGGGTTCTTTCT GAATTTAAATCAGGGAAAAGCCCTATCATGACAGCGACTGATGTGGCTGCTCGAGGCTTA GATGTTAAGGATGTTAAATATGTCATTAACTATGACTTTCCGGGATCATTGGAGGATTAT GTTCATCGCATTGGTCGAACTGGCAGAGCTGGAGCAAAAGGAACAGCTTACACGTTTTTC ACTGCTGCTAATGCCAGATTTGCCAAGGATCTGATCAACATACTAGAAGAAGCTGGACAA AAGGTCAGCCCTGAATTAGCTAATATGGGTCGTGGTGCACCACCCCCTTCTTCAGGCCAC CGTGATAGATATAGAGGGTATGGAGGTGGCCGGTCATGGAGCTGA

Peptide Sequence

PEP ID	Os01t0197200-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:5247340:5251192:-1 gene:Os01g0197200 transcript:Os01t0197200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RNA helicase 20 description:Similar to predicted protein. (Os01t0197200-01)
Sequence	MSRFDGRAADPGSYRDRRSEGAFGGGTRAFAPTSKADSAAAAADLDGLPRFEKNFYVESP SVAGMTEEEVEAYRRRREITVEGRDVPKPVREFRDVGFPEYVLQEITKAGFVEPTPIQSQ GWPMALRGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQI QQEATKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMIESHHTNLRRVT YLVLDEADRMLDMGFEPQIKKIVSQIRPDRQTLYWSATWPKEVEQLARNFLFDPYKVIIG SEELKANHAISQHVEILSESQKYNKLVNLLEDIMDGSRILIFMDTKKGCDQITRQLRMDG WPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDY VHRIGRTGRAGAKGTAYTFFTAANARFAKDLINILEEAGQKVSPELANMGRGAPPPSSGH RDRYRGYGGGRSWS

Transcript Sequence

Transcript ID	Os01t0197200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:5247340:5251192:-1 gene:Os01g0197200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RNA helicase 20 description:Similar to predicted protein. (Os01t0197200-01)
Sequence	ATCAGTTCTCCCCACACTTTTCCCCTCCGCTTGAACTCGCCGCCACTGAAATGCCCTCCA AATCCAAATCCTCCAAATTCGATTCGCGTCCTCCGTTTGCTTCGCTTCTTCTTCTAGAAC CCACCAAACTCTCCGGCCACGTGCGCCCCGCCCTAAACCCTAGCCGCACCCCCCGCCTCC CTCTCGTCGCCGGCGACCGCCGCCGCCGCCATGAGCCGCTTCGACGGCCGCGCCGCGGAC CCCGGCTCGTACCGCGACCGCCGCAGCGAAGGGGCGTTCGGGGGCGGGACGAGGGCGTTC GCCCCGACGAGCAAGGCGGACTCCGCGGCCGCGGCCGCTGACCTGGATGGGCTGCCGCGG TTCGAGAAGAACTTCTACGTGGAGTCCCCCTCCGTGGCCGGCATGACGGAGGAGGAGGTG GAGGCCTACCGGCGCCGCCGGGAGATCACCGTGGAGGGCCGCGACGTGCCCAAGCCAGTG CGCGAGTTCCGCGATGTCGGATTCCCAGAATATGTTTTGCAAGAAATTACAAAAGCTGGG TTTGTAGAACCTACTCCTATCCAGTCTCAAGGTTGGCCAATGGCACTGAGGGGACGTGAT CTTATTGGCATTGCTGAAACAGGATCAGGGAAAACACTTGCTTACCTTTTACCTGCCATT GTTCATGTTAATGCTCAGCCGATTCTAGCACCTGGCGATGGTCCAATTGTTCTGGTGTTA GCCCCTACACGTGAACTTGCTGTGCAGATACAGCAAGAGGCAACTAAGTTTGGTGCGTCA TCAAAAATAAAAAGTACTTGCATATATGGTGGTGTTCCAAAAGGTCCTCAAGTTCGCGAT CTTCAAAAAGGCGTTGAAATTGTTATAGCCACGCCAGGAAGACTGATTGATATGATAGAA TCACATCATACAAATTTGCGGAGGGTCACTTACCTTGTTTTAGATGAGGCAGACCGGATG CTGGATATGGGCTTTGAACCTCAGATTAAGAAAATTGTTTCTCAGATTCGTCCAGATCGC CAAACATTATATTGGAGTGCTACTTGGCCAAAGGAAGTTGAACAGCTAGCAAGGAACTTT CTTTTCGACCCATACAAGGTCATAATTGGTTCTGAGGAGTTGAAAGCTAATCATGCCATT TCTCAACATGTGGAGATATTATCCGAGAGTCAGAAGTACAATAAGTTGGTTAATCTACTG GAGGATATAATGGATGGCAGCCGGATATTAATATTTATGGACACGAAGAAGGGATGTGAT CAAATCACTAGACAGCTTCGGATGGATGGTTGGCCTGCTCTGTCTATCCATGGTGACAAA AGCCAAGCTGAGAGGGATTGGGTTCTTTCTGAATTTAAATCAGGGAAAAGCCCTATCATG ACAGCGACTGATGTGGCTGCTCGAGGCTTAGATGTTAAGGATGTTAAATATGTCATTAAC TATGACTTTCCGGGATCATTGGAGGATTATGTTCATCGCATTGGTCGAACTGGCAGAGCT GGAGCAAAAGGAACAGCTTACACGTTTTTCACTGCTGCTAATGCCAGATTTGCCAAGGAT CTGATCAACATACTAGAAGAAGCTGGACAAAAGGTCAGCCCTGAATTAGCTAATATGGGT CGTGGTGCACCACCCCCTTCTTCAGGCCACCGTGATAGATATAGAGGGTATGGAGGTGGC CGGTCATGGAGCTGATTTTCATATGTTGTTATTGCAGAGAGCAATGTTTGGCCTTTCTTT GTGGATGGCTATGTGTATTTCTGGCTCACTGAATCTTTTAACTAATGATCGGTAAAGGTA GATTTATATAACTTAAACACCATGCCCCTTTTATGAGATATGACTGGGTCCTTCTCATCC ACTGTGTCAATAGCTCAAACTGTGGCATTGGCATATAATATTTTGCTTACAGTTATTAG