Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0193500-00
CDS Infomation	cds chromosome:IRGSP-1.0:1:5018103:5020088:-1 gene:Os01g0193500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0193500-00)
Sequence	ATGTCAGCAGACGGCGGCGACCCCTTCGATTCTCTACCGGCGGCGATCGCCGCCGACGTC CTCGGCCGCGTCGCCGACGGGGCCGACATCGCGGCGTACTGCCTCGCCTCGCGGGCCTTC CTCGCCGCCTCCTACGCCTGCTCCCGTGTCCACCTCCGCGCCGCCGCGCTCGCACGGCGC CGCTCCGTCGCCCTCGCCGGAGGGGGCGGGGGCGGGCCCCCCGGCGGCTCCGCCATCCGA GCGGCCGCCGGGAACGCCGCGTCCCTCCTCGGGCCGCACCTCCGCTCCCTCGAGCTCGAC GCGTCCGAGGGGTGGGGCCACCCGGACGACGCGACGTGGGTGGAGGAGGGGGAGTTCGAC GAGGGCGGCGACCTCCACCTCACGGCCCGGGAGGCCGTGGTGGCGTGGGCGGACACCGCC GCCGGCAACGCTCTCCGGGAGGTGGACGTCGCCGACTACTGGCCGCAGTCGTGCTGGCGG AAGGCGGAGGCGCTTCCTGTCATCTCCCACTTCTGTCATAGTCTTTTGAAATTGCGTCTG AAGAACGCATGGCTATCCGTTGACGGGCTAAAGATAATGCCTAATCTGACTCATCTGACA CTTGAGTTCATTAGATTAGATGATGAGGATCTCAACAAATTGAATGAGTGCTTCCCTTGC CTTCAGATCCTCAATCTTATTGGAGTTGGAGGGCTCAAGGACCCTAAGATTCACCTTCAT CAACTAAAGACTTGCCACTGGGAGGTATCAAATGTTCCACGGTCATTAACAATCCGTGCG CCTAACTTGGTTCGTCTTGAGCTGAAATGTGTTCGACCAGATATGCTCATTTTGGATACC CCATCCATGTTTACTCTGAAGTTAACAGTTGATAAACTTGGACCAAATGTCCAAGCCGAT GGCCTTGTGAGTTTGAAAAATCTGCGGATAGAGTCATTGGATCTAAAGTCCCTCTTGCAA GTATTTGCAGAGAATCATGATATCACTACATTAGAGCTTGAGCTGCCCACTTCTACAAAC AAATATGAACTTTTTGAAGCAGTGAAGCCCGAGTATCTTCTTCAGCTGTTTGCCGGCATC AGCGAAGTCAAGTTGGCCCCTCGGTTTTCATGTGAAATGACGCATTGCCTGATGTTATGC ACCAGCAACCAGTTTAGAAGCTGTTTGAGGAGACTCCTGTTTCATCTACCGCCATTGAAG GATGTTCCTCATCTTGCACCCTTGTTTAATAACTGTGCTCCATCTTGCGAGGTGACCATT CTTTTCCATGCCGACTCCAGCGATGATATCCGCCAAGCCGCGACATCAGTTTGGACGCTA AGGTATCCGGGGATCAGATGGCAGTGGGGTACCTGGAACTAA

Peptide Sequence

PEP ID	Os01t0193500-00
PEP Infomation	pep chromosome:IRGSP-1.0:1:5018103:5020088:-1 gene:Os01g0193500 transcript:Os01t0193500-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0193500-00)
Sequence	MSADGGDPFDSLPAAIAADVLGRVADGADIAAYCLASRAFLAASYACSRVHLRAAALARR RSVALAGGGGGGPPGGSAIRAAAGNAASLLGPHLRSLELDASEGWGHPDDATWVEEGEFD EGGDLHLTAREAVVAWADTAAGNALREVDVADYWPQSCWRKAEALPVISHFCHSLLKLRL KNAWLSVDGLKIMPNLTHLTLEFIRLDDEDLNKLNECFPCLQILNLIGVGGLKDPKIHLH QLKTCHWEVSNVPRSLTIRAPNLVRLELKCVRPDMLILDTPSMFTLKLTVDKLGPNVQAD GLVSLKNLRIESLDLKSLLQVFAENHDITTLELELPTSTNKYELFEAVKPEYLLQLFAGI SEVKLAPRFSCEMTHCLMLCTSNQFRSCLRRLLFHLPPLKDVPHLAPLFNNCAPSCEVTI LFHADSSDDIRQAATSVWTLRYPGIRWQWGTWN

Transcript Sequence

Transcript ID	Os01t0193500-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:5018103:5020088:-1 gene:Os01g0193500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0193500-00)
Sequence	CACATGTCAGCAGACGGCGGCGACCCCTTCGATTCTCTACCGGCGGCGATCGCCGCCGAC GTCCTCGGCCGCGTCGCCGACGGGGCCGACATCGCGGCGTACTGCCTCGCCTCGCGGGCC TTCCTCGCCGCCTCCTACGCCTGCTCCCGTGTCCACCTCCGCGCCGCCGCGCTCGCACGG CGCCGCTCCGTCGCCCTCGCCGGAGGGGGCGGGGGCGGGCCCCCCGGCGGCTCCGCCATC CGAGCGGCCGCCGGGAACGCCGCGTCCCTCCTCGGGCCGCACCTCCGCTCCCTCGAGCTC GACGCGTCCGAGGGGTGGGGCCACCCGGACGACGCGACGTGGGTGGAGGAGGGGGAGTTC GACGAGGGCGGCGACCTCCACCTCACGGCCCGGGAGGCCGTGGTGGCGTGGGCGGACACC GCCGCCGGCAACGCTCTCCGGGAGGTGGACGTCGCCGACTACTGGCCGCAGTCGTGCTGG CGGAAGGCGGAGGCGCTTCCTGTCATCTCCCACTTCTGTCATAGTCTTTTGAAATTGCGT CTGAAGAACGCATGGCTATCCGTTGACGGGCTAAAGATAATGCCTAATCTGACTCATCTG ACACTTGAGTTCATTAGATTAGATGATGAGGATCTCAACAAATTGAATGAGTGCTTCCCT TGCCTTCAGATCCTCAATCTTATTGGAGTTGGAGGGCTCAAGGACCCTAAGATTCACCTT CATCAACTAAAGACTTGCCACTGGGAGGTATCAAATGTTCCACGGTCATTAACAATCCGT GCGCCTAACTTGGTTCGTCTTGAGCTGAAATGTGTTCGACCAGATATGCTCATTTTGGAT ACCCCATCCATGTTTACTCTGAAGTTAACAGTTGATAAACTTGGACCAAATGTCCAAGCC GATGGCCTTGTGAGTTTGAAAAATCTGCGGATAGAGTCATTGGATCTAAAGTCCCTCTTG CAAGTATTTGCAGAGAATCATGATATCACTACATTAGAGCTTGAGCTGCCCACTTCTACA AACAAATATGAACTTTTTGAAGCAGTGAAGCCCGAGTATCTTCTTCAGCTGTTTGCCGGC ATCAGCGAAGTCAAGTTGGCCCCTCGGTTTTCATGTGAAATGACGCATTGCCTGATGTTA TGCACCAGCAACCAGTTTAGAAGCTGTTTGAGGAGACTCCTGTTTCATCTACCGCCATTG AAGGATGTTCCTCATCTTGCACCCTTGTTTAATAACTGTGCTCCATCTTGCGAGGTGACC ATTCTTTTCCATGCCGACTCCAGCGATGATATCCGCCAAGCCGCGACATCAGTTTGGACG CTAAGGTATCCGGGGATCAGATGGCAGTGGGGTACCTGGAACTAATCCCTGCATATGTGC ATCAACATGAAGATAAAGGATCACATGTGACAGGACTAACACTACATCTCGCACCTTTTG TTAACATAGTAGCCTCTTCTAAAGTATTGCAAGCTGTTATT