Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0192500-00
CDS Infomation

cds chromosome:IRGSP-1.0:1:4979098:4980028:-1 gene:Os01g0192500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0525G02.3 protein. (Os01t0192500-00)
Sequence

ATGAGCCGATGGTGGGGAGCAAGCAGGCATCAAGGGAGGAAGATGGAGGGCAGGATGGCA
AGCTCGAGCTCACCGATTCCAATCCCCTCTCTCTCGCCTCCGTCTTCTCACCAGCGGTCT
CCTCCCCTTACTCCCCGTCTCCTTGCTCATGCTTGCGGGAGGAAGGTGATGAAAGCCATA
AGCCTGAAAGGCGTGCTGAGGACTGAGATCAACCCGTCGCTCGACAAGGTGACCGTCGTC
GGTGACGTGGACAGCAGGGTGCTCGTCCAGAAGCTCTCGAAGGTCGGCAAGATCGCCGAG
GTGATGGCGCCGCCGCCGCCGTCACCGGCTGCGCCTTCGGAAGAAGGCAAGAAGAGCAAC
AGCAATGGCGGCGAGAAGCCGACCTCGCCGGCGGACGAGAAGAGCGCGCGCAAAGACGAA
GGCAAGGACGGCAAAGGCAACAAGTCGCCAGCGACGGCGGCGGCGTGCAAGCAGGAATGC
AGCAAGTGCACGGCCAGGAAGGAAGCCGCCACACGCGCCGACGAGGCTGGCCGCGCCGGT
GGGAAGACGGCATCGTCCAAAGACGCCACCACCAAGAGCAGCGGCGACGGCGACAAATCT
GAACCAGCGGCGGTGGCAGTGGAGTACCAGTACCACCACCACTACAACTGGGCGGAGCCG
GCCATGGTGGTGCCGGTTCACCTCCCGTACTTCGCAGCGAATGCGACGCCGTACTACGCC
GGAGGCTACTACCCGATGCCGCCGCCGATGTCGGTGCTCCGTCACCCTTCTTAG

Peptide Sequence

PEP ID

Os01t0192500-00
PEP Infomation

pep chromosome:IRGSP-1.0:1:4979098:4980028:-1 gene:Os01g0192500 transcript:Os01t0192500-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0525G02.3 protein. (Os01t0192500-00)
Sequence

MSRWWGASRHQGRKMEGRMASSSSPIPIPSLSPPSSHQRSPPLTPRLLAHACGRKVMKAI
SLKGVLRTEINPSLDKVTVVGDVDSRVLVQKLSKVGKIAEVMAPPPPSPAAPSEEGKKSN
SNGGEKPTSPADEKSARKDEGKDGKGNKSPATAAACKQECSKCTARKEAATRADEAGRAG
GKTASSKDATTKSSGDGDKSEPAAVAVEYQYHHHYNWAEPAMVVPVHLPYFAANATPYYA
GGYYPMPPPMSVLRHPS

Transcript Sequence

Transcript ID

Os01t0192500-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:4979098:4980028:-1 gene:Os01g0192500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0525G02.3 protein. (Os01t0192500-00)
Sequence

ATGAGCCGATGGTGGGGAGCAAGCAGGCATCAAGGGAGGAAGATGGAGGGCAGGATGGCA
AGCTCGAGCTCACCGATTCCAATCCCCTCTCTCTCGCCTCCGTCTTCTCACCAGCGGTCT
CCTCCCCTTACTCCCCGTCTCCTTGCTCATGCTTGCGGGAGGAAGGTGATGAAAGCCATA
AGCCTGAAAGGCGTGCTGAGGACTGAGATCAACCCGTCGCTCGACAAGGTGACCGTCGTC
GGTGACGTGGACAGCAGGGTGCTCGTCCAGAAGCTCTCGAAGGTCGGCAAGATCGCCGAG
GTGATGGCGCCGCCGCCGCCGTCACCGGCTGCGCCTTCGGAAGAAGGCAAGAAGAGCAAC
AGCAATGGCGGCGAGAAGCCGACCTCGCCGGCGGACGAGAAGAGCGCGCGCAAAGACGAA
GGCAAGGACGGCAAAGGCAACAAGTCGCCAGCGACGGCGGCGGCGTGCAAGCAGGAATGC
AGCAAGTGCACGGCCAGGAAGGAAGCCGCCACACGCGCCGACGAGGCTGGCCGCGCCGGT
GGGAAGACGGCATCGTCCAAAGACGCCACCACCAAGAGCAGCGGCGACGGCGACAAATCT
GAACCAGCGGCGGTGGCAGTGGAGTACCAGTACCACCACCACTACAACTGGGCGGAGCCG
GCCATGGTGGTGCCGGTTCACCTCCCGTACTTCGCAGCGAATGCGACGCCGTACTACGCC
GGAGGCTACTACCCGATGCCGCCGCCGATGTCGGTGCTCCGTCACCCTTCTTAG