Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0191500-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:4891518:4896876:1 gene:Os01g0191500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Mitochondrial processing peptidase. (Os01t0191500-01)
Sequence

ATGTACCGCGCCGCCTCCGGCCTCGGGGCCATCAAGCGGCATGGACTGGATGGTCAAATG
TTGAATGTTGCGATTAGGTGTGCTAGCACAAGTGTTGCACAGAGGTCATCAGGTGGCTTC
TGGACCTGGCTGACAGGTGCACGGTCAAATGCATTACCTCCTCCAGATTTTACACTTCCA
GGGGTCACCATTCCACCTCCGCTACCTGACCTTGTGGAGCCTGGCAAGACAAAAATCACA
ACACTTGCAAATGGTGTAAAAATTGCTTCTGAGACAACTCCAGGACCATCTTGTTCAGTT
GGAGTATATGTTAATTGTGGTTCTGTACATGAAGCACCTGAAACACTAGGTGCCACTCAG
CTGTTGAAGAAGATGGCCTATACAACCACTACAAACAGGAGCCATTTGCGTGTTGTGCGT
GAAATCGAGGCAGTAGGTGGCAATGTGAAAGCATCTGCTAACCGTGAGATGATGAGCTAC
AGTTATGCAGCCCTGAAAACTTACATGCCTGAAATGGTTGAGGTGCTTATTGATTGTGTA
CGCAATCCTGCTTTTCTTGATTGGGAAGTCAAGGAACAGATAATGAAACTGAAGGCAGAG
CTTGCAGAAGCTTCAAGTAACCCTGAAACTTTTCTTTTGGAGGCTCTTCATTCTACTGGT
TATTCTGGTGCTTTGGCAACCCCTCTGATTGCCTCAGAATCCTCAGTTAGCCGATTGAAT
ACGAATGTCCTAGAATACTTCTTAGCTGAGAATTACACTGCTCCCCGAATTGTTCTAGCT
GCAACAGGTGTTGATCATGATGAATTGGTATCTATTGCTGAACCACTTCTGTCTGACATG
CCTGGTGTAACTGGACCAGCAAAGCCAAAGTCTACCTATGTTGGTGGGGAATATAGAAGA
ACTGCTGATTCATCGAACACAGATGTTGCTTTGGCATTTGAGGTCCCTGGTGGGTGGCTC
AAAGAAAAAGAATTTGTAACAGTATCAGTTCTTCAGACCCTTCTTGGTGGCGGTGGCACA
TATTCCTGGGGAAGGCATGGAAAAGGCTTGCATTCAAGTCTAAATCATCTCGCAAATGAA
TTCGACCAGATTAGATCGATAGCTGCTTTCAAGGATGTTCACAGTAACACTGGCATTTTT
GGAATTCATACATCTACTGATGCAGCATTCGTTCCTAAGGCTATTGACTTGGCAACCAGA
GAGCTCACTTCTCTTGCCACTCCTGGAAAAGTTGACCAAACTCAACTTGACCGTGCTAAA
GCGACAGCTAAATCAGCAATCTTGATGAACCTGGAATCAAAGGCATCAGCAACTGAAGAC
ATGGGACGGCAAATATTGGCCTTTGGTGAAAGGAAACCTGTTGAGCACCTTCTCAAGGCT
GTTGATGGTGTTACTCTGAAAGACATTACAGCCCTTGCTGAGAAAATCATATCATCACCA
TTGACAATGGCATCTCATGGAAACGTTCTGAACGTGCCAACTTATGATTCAGTCAGTGGC
AAGTTTCGCTCGAAATGA

Peptide Sequence

PEP ID

Os01t0191500-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:4891518:4896876:1 gene:Os01g0191500 transcript:Os01t0191500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Mitochondrial processing peptidase. (Os01t0191500-01)
Sequence

MYRAASGLGAIKRHGLDGQMLNVAIRCASTSVAQRSSGGFWTWLTGARSNALPPPDFTLP
GVTIPPPLPDLVEPGKTKITTLANGVKIASETTPGPSCSVGVYVNCGSVHEAPETLGATQ
LLKKMAYTTTTNRSHLRVVREIEAVGGNVKASANREMMSYSYAALKTYMPEMVEVLIDCV
RNPAFLDWEVKEQIMKLKAELAEASSNPETFLLEALHSTGYSGALATPLIASESSVSRLN
TNVLEYFLAENYTAPRIVLAATGVDHDELVSIAEPLLSDMPGVTGPAKPKSTYVGGEYRR
TADSSNTDVALAFEVPGGWLKEKEFVTVSVLQTLLGGGGTYSWGRHGKGLHSSLNHLANE
FDQIRSIAAFKDVHSNTGIFGIHTSTDAAFVPKAIDLATRELTSLATPGKVDQTQLDRAK
ATAKSAILMNLESKASATEDMGRQILAFGERKPVEHLLKAVDGVTLKDITALAEKIISSP
LTMASHGNVLNVPTYDSVSGKFRSK

Transcript Sequence

Transcript ID

Os01t0191500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:4891518:4896876:1 gene:Os01g0191500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Mitochondrial processing peptidase. (Os01t0191500-01)
Sequence

CCCCTTCCACTTGTCTGACGGGCCCTCGCCTTCCCTTCGCTTCCTCCCCATCTCCGCCTC
CGCCTCCGCCGCCGCGCCGCCGCCGGCGACGACTCCGACGAGCGACCCCTCCGCGGGCAC
CGGGTCGCCATGTACCGCGCCGCCTCCGGCCTCGGGGCCATCAAGCGGCATGGACTGGAT
GGTCAAATGTTGAATGTTGCGATTAGGTGTGCTAGCACAAGTGTTGCACAGAGGTCATCA
GGTGGCTTCTGGACCTGGCTGACAGGTGCACGGTCAAATGCATTACCTCCTCCAGATTTT
ACACTTCCAGGGGTCACCATTCCACCTCCGCTACCTGACCTTGTGGAGCCTGGCAAGACA
AAAATCACAACACTTGCAAATGGTGTAAAAATTGCTTCTGAGACAACTCCAGGACCATCT
TGTTCAGTTGGAGTATATGTTAATTGTGGTTCTGTACATGAAGCACCTGAAACACTAGGT
GCCACTCAGCTGTTGAAGAAGATGGCCTATACAACCACTACAAACAGGAGCCATTTGCGT
GTTGTGCGTGAAATCGAGGCAGTAGGTGGCAATGTGAAAGCATCTGCTAACCGTGAGATG
ATGAGCTACAGTTATGCAGCCCTGAAAACTTACATGCCTGAAATGGTTGAGGTGCTTATT
GATTGTGTACGCAATCCTGCTTTTCTTGATTGGGAAGTCAAGGAACAGATAATGAAACTG
AAGGCAGAGCTTGCAGAAGCTTCAAGTAACCCTGAAACTTTTCTTTTGGAGGCTCTTCAT
TCTACTGGTTATTCTGGTGCTTTGGCAACCCCTCTGATTGCCTCAGAATCCTCAGTTAGC
CGATTGAATACGAATGTCCTAGAATACTTCTTAGCTGAGAATTACACTGCTCCCCGAATT
GTTCTAGCTGCAACAGGTGTTGATCATGATGAATTGGTATCTATTGCTGAACCACTTCTG
TCTGACATGCCTGGTGTAACTGGACCAGCAAAGCCAAAGTCTACCTATGTTGGTGGGGAA
TATAGAAGAACTGCTGATTCATCGAACACAGATGTTGCTTTGGCATTTGAGGTCCCTGGT
GGGTGGCTCAAAGAAAAAGAATTTGTAACAGTATCAGTTCTTCAGACCCTTCTTGGTGGC
GGTGGCACATATTCCTGGGGAAGGCATGGAAAAGGCTTGCATTCAAGTCTAAATCATCTC
GCAAATGAATTCGACCAGATTAGATCGATAGCTGCTTTCAAGGATGTTCACAGTAACACT
GGCATTTTTGGAATTCATACATCTACTGATGCAGCATTCGTTCCTAAGGCTATTGACTTG
GCAACCAGAGAGCTCACTTCTCTTGCCACTCCTGGAAAAGTTGACCAAACTCAACTTGAC
CGTGCTAAAGCGACAGCTAAATCAGCAATCTTGATGAACCTGGAATCAAAGGCATCAGCA
ACTGAAGACATGGGACGGCAAATATTGGCCTTTGGTGAAAGGAAACCTGTTGAGCACCTT
CTCAAGGCTGTTGATGGTGTTACTCTGAAAGACATTACAGCCCTTGCTGAGAAAATCATA
TCATCACCATTGACAATGGCATCTCATGGAAACGTTCTGAACGTGCCAACTTATGATTCA
GTCAGTGGCAAGTTTCGCTCGAAATGAGTAGTAATGTGGTCATTGTTTTCCTCCTCCTGG
ACAAGTTTTAACTGTTGATAGTTTTTCCTCAGGCCATTCATTGGCAGGGTTTCAGAGAGA
AAAATAAGGAGCTTCATACAATTTTGATCATTTAACTCTGGATGATTGAGAATACCATAT
TTTACCTTTTTCTGCAACATTTGTCCACTTGAGTTGGAATTTTTTATGCTGTTTTCATCA
GTTTTATGGGCCTGTAAATTTTAGGGCCCTCTTTCGGTGGCGGCCAGGGCCTGTACAAAA
TACCGGTCTCCTTGCAAAATCTTTGACACGAATGCTGAAACACTTGAATAAATATTCTAT
CTATACTCTTGCATGACAGTGAAATTCTGC