Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0190300-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:4816831:4818958:1 gene:Os01g0190300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:IAA2 description:Similar to Auxin-responsive protein IAA26 (Indoleacetic acid-induced protein 26) (Phytochrome-associated protein 1). (Os01t0190300-01)
Sequence	ATGGCGTGGAGGAGAGGGTTCGGCCGGGAGGAGGAGGACGCGGCGGCGGCGGGGGAGAGC GGCCTCGAGCTCTGCCTTGGCCTCCCCGCCTACTTCTCCTCCTCCTCCTCCTCCAAGCCA TCGGAGGGATCAACCGCTGCTCCTGCTTTTGCTCTCCGATCCAATGGAACCAATGCCTCC AAGCCAAGCGGGGCAGCGGCGGCGGCGCCGGTTGTGGGGTGGCCGCCGGTGCGGTCGTTC CGGCGGAACCTCGCCTCGTCGTCGTCATCGTCGTCCAAGCAGGCGCCGCCGCCGCCGTCG TCGTCGCCGCAGAACGGCGACAAGGCGAGCAAAGACGGCGGCGCGGAGAAGGGCATGTTC GTGAAGATCAACATGGACGGCGTCCCGATCGGGAGGAAGGTCGACCTCGCGGCGTACGGC GGCTACGCCCAGCTCTCCGCCGCCGTCGACAAGCTCTTCCGCGGCCTCCTAGCCGCTCAG AGCGCTGCCGCTGACGGCGAGGCCGACGCGGCCGCCGCCGGAGAGATGGTCGGCGGCGGC GAGTACACGCTCGTCTACGAGGACGACGAGGGCGACCGGATGCTCGTCGGCGACGTTCCC TGGCAGATGTTCATCGCCACCGCGAAGAGGCTGCGCGTGCTCAAGAGCTCCGACCTGCCG CCGCCGTCGCTGATGAGGGCGGCAGGGAGCAGGAAGAGGGCAGCAGCTGACAGCTGA

Peptide Sequence

PEP ID	Os01t0190300-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:4816831:4818958:1 gene:Os01g0190300 transcript:Os01t0190300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:IAA2 description:Similar to Auxin-responsive protein IAA26 (Indoleacetic acid-induced protein 26) (Phytochrome-associated protein 1). (Os01t0190300-01)
Sequence	MAWRRGFGREEEDAAAAGESGLELCLGLPAYFSSSSSSKPSEGSTAAPAFALRSNGTNAS KPSGAAAAAPVVGWPPVRSFRRNLASSSSSSSKQAPPPPSSSPQNGDKASKDGGAEKGMF VKINMDGVPIGRKVDLAAYGGYAQLSAAVDKLFRGLLAAQSAAADGEADAAAAGEMVGGG EYTLVYEDDEGDRMLVGDVPWQMFIATAKRLRVLKSSDLPPPSLMRAAGSRKRAAADS

Transcript Sequence

Transcript ID	Os01t0190300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:4816831:4818958:1 gene:Os01g0190300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:IAA2 description:Similar to Auxin-responsive protein IAA26 (Indoleacetic acid-induced protein 26) (Phytochrome-associated protein 1). (Os01t0190300-01)
Sequence	TCACTCCTGCCCTTGCGAGCTTCGCACGCAGCGATCGAGAGATAGAACAGCGAGATAATG GTAGTAGCAGCCGTTGCTTGCTTGCATTGGCTTAGCTAAGCTCAAGCTAGCTCCTACTAC TCCTACCTGCTTCAGCTTTGCTTCCTGCGCATGAGCTAGATGCTCCCTCGCATCCATCTC CTAGCTTTCCTTCCCTTTCTCTCGCTGCTGCTGCTGCTGCTGCATCCTCCTCTCCTGTGA CCTGTCACAGCTTGGCCTAGGACTAGTAGGGAGTAGTGATTCTTGCTCGCTTTGTTTCTC TGAATCCTTGCAGCTTGGCTTGGCCTTGGCCTTGGCTGCTTTGAATAGTACCTGACGGCC TCGTGGCGCGCAAACCTTGTCCCTTTTCCCCGCAAATCCTTGCCGCCTTTTGGTCGCTCT CTGCTCCTCCTCGTCCCTCGCGCCGTCACCACCTGCTCTGTCTCCTCTCCTTCTTGCAGC TCGTCGTCGTCGTCGTTGATCTTTGGCTATATATTACTCCCTCCTGCTGCTGCTGCTGCA CGGACGCAGTGAGGAGGAAGAGCTCGTGACTTGTTTTCATCAGGAGTACAGTTGTCAGTA GCTGATCGAGGTCGTCGTCGTCGCCATCGATGGCGTGGAGGAGAGGGTTCGGCCGGGAGG AGGAGGACGCGGCGGCGGCGGGGGAGAGCGGCCTCGAGCTCTGCCTTGGCCTCCCCGCCT ACTTCTCCTCCTCCTCCTCCTCCAAGCCATCGGAGGGATCAACCGCTGCTCCTGCTTTTG CTCTCCGATCCAATGGAACCAATGCCTCCAAGCCAAGCGGGGCAGCGGCGGCGGCGCCGG TTGTGGGGTGGCCGCCGGTGCGGTCGTTCCGGCGGAACCTCGCCTCGTCGTCGTCATCGT CGTCCAAGCAGGCGCCGCCGCCGCCGTCGTCGTCGCCGCAGAACGGCGACAAGGCGAGCA AAGACGGCGGCGCGGAGAAGGGCATGTTCGTGAAGATCAACATGGACGGCGTCCCGATCG GGAGGAAGGTCGACCTCGCGGCGTACGGCGGCTACGCCCAGCTCTCCGCCGCCGTCGACA AGCTCTTCCGCGGCCTCCTAGCCGCTCAGAGCGCTGCCGCTGACGGCGAGGCCGACGCGG CCGCCGCCGGAGAGATGGTCGGCGGCGGCGAGTACACGCTCGTCTACGAGGACGACGAGG GCGACCGGATGCTCGTCGGCGACGTTCCCTGGCAGATGTTCATCGCCACCGCGAAGAGGC TGCGCGTGCTCAAGAGCTCCGACCTGCCGCCGCCGTCGCTGATGAGGGCGGCAGGGAGCA GGAAGAGGGCAGCAGCTGACAGCTGAACTAATCACTGTCAATTTCAGCTGCTGCTGCCGA TGATGATGAATTGATCATGGTGTGGTGCTTGGATTGAGATCCCTCTGCAGTCAAATACAC GGTCCTTTGTCATTGACAGGTGGACCTAGGGATTATCGGGCCTATATGTTAATGATAACG TCACATGACTTTAACTGCAGAGGATTTTGATCTGTGGTGCTTGGCTTTATGGCCATTTTG ATGTCTTTGGGCTGCATAATTATATGTATACTTACGAGAGATCATGACGGTATTAGTGGT CATGATTAGTAGTACGATCGAGTAGCATGGAACAGTGTTGTTAATTACTAGTAGCTGGGT GATTAAGCTAATCTATGGCGCCTTTGGTGGTGTAATTTTGGATGTAGGCAGGCATGTGTC AAATTAGTTATGTGTTTTGTTAATTAAGCGATCTAGTTAATGCGTTTAAG