Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0188400-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:4739271:4744472:-1 gene:Os01g0188400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NADP-MALIC ENZYME 1 description:NADP-dependent malic enzyme, chloroplast precursor (EC 1.1.1.40) (NADP-ME). (Os01t0188400-01);Similar to Malic enzyme. (Os01t0188400-02)
Sequence	ATGCTGTCCGCGCGCGCCGCCGCCACCGCCGCCGCCGCCGCCGCCTCCCCGCTGTGGAAG CGCGGCGAGGGTGGCAGCAGCGGGAGCGGGAGCGGATGCACGAGCTGCAGGGAGGTGCGG AGGAGGGCCGCGGCGGTGAGGGTCCGTGCGGCGGCGCCGAGGAGGGTGGAGGCGGTCGCG ATGGAGTCCGCGGCGGAGACCGAGAAGAAGGAGGAGGTTGCGGCGGCCGGCGGCGGGGTT GAGGACATGGCTACCGAGGAGGTGCCCGTCACGCCATGGGCCTTCTCCGTCGCGAGTGGT TACACCCTTTTGAGGGATCCACATCACAACAAGGGCCTTGCCTTTAGTGAGAAGGAGCGG GATGCTCATTACTTACGTGGCCTTCTTCCTCCGGCAGTTGTGTCTCAGGATCTTCAAGTG AAGAAGATCATGCATAATCTTCGCCAGTACAGTGTACCTTTGCAGCGTTACATGGCCATG ATGGATCTCCAGGAGAGGAACGAGAGGCTCTTCTACAAGCTTTTGATTGATAATGTGGAG GAGCTTCTCCCTGTGGTGTATACACCAACAGTAGGTGAGGCCTGCCAGAAGTATGGGAGC ATATTTAGACAACCACAGGGTCTCTATGTCAGCTTGAAGGACAAGGGAAAGGTTCTTGAT GTGCTAAGGAACTGGCCAGAGAGAAACATTCAAGTTATTGTTGTTACTGATGGTGAGCGC ATTTTGGGGCTTGGAGATTTGGGTTGTCAGGGAATGGGTATTCCTGTTGGTAAACTTTCT CTGTACACTGCCCTTGGAGGAGTTCGCCCGTCAGCTTGTTTACCTATCACGATTGATGTT GGTACAAACAATGAGCAATTGTTGAATGATGAATTCTACATTGGGCTCCGGCAAAGGCGT GCTACTGGCAAGGAGTACCATGAGCTCATGGAAGAATTTATGAGTGCCGTTAAGCAAATC TATGGTGAGAAAGTTCTGATACAGTTTGAGGACTTCGCCAATCACAACGCATTTGATTTG CTTGCAAAATACAGCAAGAGTCATCTTGTTTTCAATGATGATATCCAGGGAACAGCATCT GTGGTCCTTGCAGGTCTTTTATCATCACTAAAGGTGGTTGGTGGAACCCTGGCTGAACAC ACTTATTTGTTCCTTGGTGCTGGTGAGGCTGGAACTGGTATTGCAGAACTCATTGCTCTT GAGATTTCAAAACAGACAAAGGCTCCAATTGAGGAGTGCCGCAAGAAGGTTTGGCTGCTG GATTCAAAGGGGTTGATCGTTAACTCACGAAAAGAATCCCTCCAGGCATTTAAAAAGCCT TGGGCACATGAGCATGAACCTGTAACGACACTGTTAGATGCTGTCCAGTCCATCAAACCT ACTGTGCTGATTGGAACATCCGGAGTTGGCAAAACTTTTACTAAAGAAGTTATTGAGGCC ATGGCTTCCTTTAACGAGCGACCCGTCATTTTCTCTCTGTCAAACCCCACATCACACTCT GAGTGTACTGCTGAAGAAGCATATAATTGGAGCCAGGGTCGTGCAGTATTTGCCAGCGGC AGTCCGTTTGACCCTGTGGAGTACAATGGAAAGATACATGTGCCAGGCCAGTCGAACAAT GCCTACATTTTCCCTGGATTCGGCCTCGGTGTCGTAATCTCTGGAGCTGTCCGTGTTCAC GAGGATATGCTTCTAGCTGCCTCGGAAACACTAGCTGATCAGGCCACTCAGGAGAACTTT GAGAAGGGATCGATCTTCCCGCCCTTCACAAACATCAGAAAGATTTCTGCTCGCATTGCC GCAAGCGTGGCTGCAAAAGCCTATGAACTTGGACTGGCGACCCGGCTGCCTCAACCCAGG GATCTGGAGAAATACGCAGAGAGCTGCATGTACACCCCCGTATACCGCAGCTACCGGTAA

Peptide Sequence

PEP ID	Os01t0188400-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:4739271:4744472:-1 gene:Os01g0188400 transcript:Os01t0188400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NADP-MALIC ENZYME 1 description:NADP-dependent malic enzyme, chloroplast precursor (EC 1.1.1.40) (NADP-ME). (Os01t0188400-01);Similar to Malic enzyme. (Os01t0188400-02)
Sequence	MLSARAAATAAAAAASPLWKRGEGGSSGSGSGCTSCREVRRRAAAVRVRAAAPRRVEAVA MESAAETEKKEEVAAAGGGVEDMATEEVPVTPWAFSVASGYTLLRDPHHNKGLAFSEKER DAHYLRGLLPPAVVSQDLQVKKIMHNLRQYSVPLQRYMAMMDLQERNERLFYKLLIDNVE ELLPVVYTPTVGEACQKYGSIFRQPQGLYVSLKDKGKVLDVLRNWPERNIQVIVVTDGER ILGLGDLGCQGMGIPVGKLSLYTALGGVRPSACLPITIDVGTNNEQLLNDEFYIGLRQRR ATGKEYHELMEEFMSAVKQIYGEKVLIQFEDFANHNAFDLLAKYSKSHLVFNDDIQGTAS VVLAGLLSSLKVVGGTLAEHTYLFLGAGEAGTGIAELIALEISKQTKAPIEECRKKVWLL DSKGLIVNSRKESLQAFKKPWAHEHEPVTTLLDAVQSIKPTVLIGTSGVGKTFTKEVIEA MASFNERPVIFSLSNPTSHSECTAEEAYNWSQGRAVFASGSPFDPVEYNGKIHVPGQSNN AYIFPGFGLGVVISGAVRVHEDMLLAASETLADQATQENFEKGSIFPPFTNIRKISARIA ASVAAKAYELGLATRLPQPRDLEKYAESCMYTPVYRSYR

Transcript Sequence

Transcript ID	Os01t0188400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:4739271:4744472:-1 gene:Os01g0188400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NADP-MALIC ENZYME 1 description:NADP-dependent malic enzyme, chloroplast precursor (EC 1.1.1.40) (NADP-ME). (Os01t0188400-01);Similar to Malic enzyme. (Os01t0188400-02)
Sequence	ACGCGCTCGCTTCCTCTTCCCCCCAGCCATCGGCGACGCGAGGACGCGACGCGCCCCACC AACCACCACCGCCTCCGCCGACCTCGCCGCCATGCTGTCCGCGCGCGCCGCCGCCACCGC CGCCGCCGCCGCCGCCTCCCCGCTGTGGAAGCGCGGCGAGGGTGGCAGCAGCGGGAGCGG GAGCGGATGCACGAGCTGCAGGGAGGTGCGGAGGAGGGCCGCGGCGGTGAGGGTCCGTGC GGCGGCGCCGAGGAGGGTGGAGGCGGTCGCGATGGAGTCCGCGGCGGAGACCGAGAAGAA GGAGGAGGTTGCGGCGGCCGGCGGCGGGGTTGAGGACATGGCTACCGAGGAGGTGCCCGT CACGCCATGGGCCTTCTCCGTCGCGAGTGGTTACACCCTTTTGAGGGATCCACATCACAA CAAGGGCCTTGCCTTTAGTGAGAAGGAGCGGGATGCTCATTACTTACGTGGCCTTCTTCC TCCGGCAGTTGTGTCTCAGGATCTTCAAGTGAAGAAGATCATGCATAATCTTCGCCAGTA CAGTGTACCTTTGCAGCGTTACATGGCCATGATGGATCTCCAGGAGAGGAACGAGAGGCT CTTCTACAAGCTTTTGATTGATAATGTGGAGGAGCTTCTCCCTGTGGTGTATACACCAAC AGTAGGTGAGGCCTGCCAGAAGTATGGGAGCATATTTAGACAACCACAGGGTCTCTATGT CAGCTTGAAGGACAAGGGAAAGGTTCTTGATGTGCTAAGGAACTGGCCAGAGAGAAACAT TCAAGTTATTGTTGTTACTGATGGTGAGCGCATTTTGGGGCTTGGAGATTTGGGTTGTCA GGGAATGGGTATTCCTGTTGGTAAACTTTCTCTGTACACTGCCCTTGGAGGAGTTCGCCC GTCAGCTTGTTTACCTATCACGATTGATGTTGGTACAAACAATGAGCAATTGTTGAATGA TGAATTCTACATTGGGCTCCGGCAAAGGCGTGCTACTGGCAAGGAGTACCATGAGCTCAT GGAAGAATTTATGAGTGCCGTTAAGCAAATCTATGGTGAGAAAGTTCTGATACAGTTTGA GGACTTCGCCAATCACAACGCATTTGATTTGCTTGCAAAATACAGCAAGAGTCATCTTGT TTTCAATGATGATATCCAGGGAACAGCATCTGTGGTCCTTGCAGGTCTTTTATCATCACT AAAGGTGGTTGGTGGAACCCTGGCTGAACACACTTATTTGTTCCTTGGTGCTGGTGAGGC TGGAACTGGTATTGCAGAACTCATTGCTCTTGAGATTTCAAAACAGACAAAGGCTCCAAT TGAGGAGTGCCGCAAGAAGGTTTGGCTGCTGGATTCAAAGGGGTTGATCGTTAACTCACG AAAAGAATCCCTCCAGGCATTTAAAAAGCCTTGGGCACATGAGCATGAACCTGTAACGAC ACTGTTAGATGCTGTCCAGTCCATCAAACCTACTGTGCTGATTGGAACATCCGGAGTTGG CAAAACTTTTACTAAAGAAGTTATTGAGGCCATGGCTTCCTTTAACGAGCGACCCGTCAT TTTCTCTCTGTCAAACCCCACATCACACTCTGAGTGTACTGCTGAAGAAGCATATAATTG GAGCCAGGGTCGTGCAGTATTTGCCAGCGGCAGTCCGTTTGACCCTGTGGAGTACAATGG AAAGATACATGTGCCAGGCCAGTCGAACAATGCCTACATTTTCCCTGGATTCGGCCTCGG TGTCGTAATCTCTGGAGCTGTCCGTGTTCACGAGGATATGCTTCTAGCTGCCTCGGAAAC ACTAGCTGATCAGGCCACTCAGGAGAACTTTGAGAAGGGATCGATCTTCCCGCCCTTCAC AAACATCAGAAAGATTTCTGCTCGCATTGCCGCAAGCGTGGCTGCAAAAGCCTATGAACT TGGACTGGCGACCCGGCTGCCTCAACCCAGGGATCTGGAGAAATACGCAGAGAGCTGCAT GTACACCCCCGTATACCGCAGCTACCGGTAACGCCGCGGAGGTCAAATTTTGCAGTAATA AAACCTACCAATGCAGTAGGGGATACTGCTATGTTGTGTTGCCATTGTCGCCGTTGGCCG TTGCTGCTGCAAGGCATTGTATCTGTCTATATAAATCACCTGTTGTAACGTTATGGAAGC AATCTCCATGTGTACCACCAGTGTTTCATTCTTTGATCGATTATAAAGAGTGCAATAAGA ACATAGTTTTAGCTCCCATTGTAATGGGCAGCATATCTC