Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0188100-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:4726734:4731142:1 gene:Os01g0188100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Isopenicillin N synthase family protein. (Os01t0188100-01)
Sequence

ATGGAGTGCTCCATCTCGAGGACGAATCTGAATTGCATCAGCCTGGGTGACCCGGACACC
AAGAAATCGGTCGCGCTCCTCAAGCAGGCATGTCTGGATTCAGGCTTCTTCTATGTGGTG
GATCATGGAATAAGCCAGGAGTTAATGGATGATGTTTTTGCCCAGAGCAAGAAATTCTTT
GACCTTCCCATCAATGAGAAAATGGAGCTTCTCCGGGATGAGAAGAATCGAGGCTATACA
CCCATGCTAGATGAGATTCTTGATCCAGAAAATCAAGTGAATGGTGACTACAAGGAAGGG
TATTATATAGGTATTGAGATACCAGAAGATGATCCACAAGCAAACAGACCATTCTATGGT
CCAAATCAGTGGCCATCCGATGAAGTATTGCCAAGATGGAGGAAGGTGATGGAACAGTAT
CATAGCGAGGCCCTGAGGGTGGCAAAATCAATTGCAAGGATTATTGCCCTTGCTCTAAAC
CTAGAAGAGGACTTCTTTGATAAACCAGAAATGCTTGGCGAGCCCATAGCCACATTAAGG
CTCCTGCATTATGAAGGTGGACAAAAAACAGGTAAAGTATCAAATCCTGCAGAGGGAGTT
TTTGGAGCAGGTGCCCATTCTGATTATGGCCTAATCACTCTACTGGCAACCGATGATGTA
GTTGGTCTCCAAATATGCAAGGACAGGAATGCTCAGCCTCAAGTATGGGAATATGTAGCT
CCTGTAAAAGGAGGTTTTATTGTCAATCTTGGCGATATGCTCGAACGGTGGAGTAACTGT
ATTTTCAGGTCAACCTTACATCGAGTGGTCTTAGATGGACGAGAACGTCATTCTATTGCG
TTCTTTGTGGAACCAAGCCACGATTGCGTAGTCGAGTGCCTGCCAACCTGCAAATCTGAA
TCAAATCCTCCAAAGTTCCCTCCGATCACTTGCTCGGCATACCTATCGCAGCGGTACAAG
GATACGCATGCCGATCTGACCGCTTACAGCAGCAACAAGGCCTAG

Peptide Sequence

PEP ID

Os01t0188100-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:4726734:4731142:1 gene:Os01g0188100 transcript:Os01t0188100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Isopenicillin N synthase family protein. (Os01t0188100-01)
Sequence

MECSISRTNLNCISLGDPDTKKSVALLKQACLDSGFFYVVDHGISQELMDDVFAQSKKFF
DLPINEKMELLRDEKNRGYTPMLDEILDPENQVNGDYKEGYYIGIEIPEDDPQANRPFYG
PNQWPSDEVLPRWRKVMEQYHSEALRVAKSIARIIALALNLEEDFFDKPEMLGEPIATLR
LLHYEGGQKTGKVSNPAEGVFGAGAHSDYGLITLLATDDVVGLQICKDRNAQPQVWEYVA
PVKGGFIVNLGDMLERWSNCIFRSTLHRVVLDGRERHSIAFFVEPSHDCVVECLPTCKSE
SNPPKFPPITCSAYLSQRYKDTHADLTAYSSNKA

Transcript Sequence

Transcript ID

Os01t0188100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:4726734:4731142:1 gene:Os01g0188100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Isopenicillin N synthase family protein. (Os01t0188100-01)
Sequence

CCAACTCCCTTCCCTCTCCTCTCCTCTCCTCTCCTCATCCGGAGACGCCACGCCGACACG
CAGCTGCGTGTGCGAGGAGGAAGAAACCCAGAGGAGCAGCAGGAGCGAAGCAGGAAGGAA
GCAGAGGAGAGGGAATCCAAGGTGAGGGAGGGAGAGCATGGAGTGCTCCATCTCGAGGAC
GAATCTGAATTGCATCAGCCTGGGTGACCCGGACACCAAGAAATCGGTCGCGCTCCTCAA
GCAGGCATGTCTGGATTCAGGCTTCTTCTATGTGGTGGATCATGGAATAAGCCAGGAGTT
AATGGATGATGTTTTTGCCCAGAGCAAGAAATTCTTTGACCTTCCCATCAATGAGAAAAT
GGAGCTTCTCCGGGATGAGAAGAATCGAGGCTATACACCCATGCTAGATGAGATTCTTGA
TCCAGAAAATCAAGTGAATGGTGACTACAAGGAAGGGTATTATATAGGTATTGAGATACC
AGAAGATGATCCACAAGCAAACAGACCATTCTATGGTCCAAATCAGTGGCCATCCGATGA
AGTATTGCCAAGATGGAGGAAGGTGATGGAACAGTATCATAGCGAGGCCCTGAGGGTGGC
AAAATCAATTGCAAGGATTATTGCCCTTGCTCTAAACCTAGAAGAGGACTTCTTTGATAA
ACCAGAAATGCTTGGCGAGCCCATAGCCACATTAAGGCTCCTGCATTATGAAGGTGGACA
AAAAACAGGTAAAGTATCAAATCCTGCAGAGGGAGTTTTTGGAGCAGGTGCCCATTCTGA
TTATGGCCTAATCACTCTACTGGCAACCGATGATGTAGTTGGTCTCCAAATATGCAAGGA
CAGGAATGCTCAGCCTCAAGTATGGGAATATGTAGCTCCTGTAAAAGGAGGTTTTATTGT
CAATCTTGGCGATATGCTCGAACGGTGGAGTAACTGTATTTTCAGGTCAACCTTACATCG
AGTGGTCTTAGATGGACGAGAACGTCATTCTATTGCGTTCTTTGTGGAACCAAGCCACGA
TTGCGTAGTCGAGTGCCTGCCAACCTGCAAATCTGAATCAAATCCTCCAAAGTTCCCTCC
GATCACTTGCTCGGCATACCTATCGCAGCGGTACAAGGATACGCATGCCGATCTGACCGC
TTACAGCAGCAACAAGGCCTAGAAGGCCAAGCGCCATTTTGATCTCATCCAAGCTCTCAG
CTGTACTTAAGATGTACAACCTGCAATAATAATCCCTTAGGATGGATTGATGGTGTTCTA
TACTAATTAAATTAATCCCAGTGTACCTGTAACCCCAGTCTCATAGTGATATAGTAGTAT
ACTAGTGATAGTACATTGTTCATGAAGTGAGGAGTGAGCAGTGGCATCTGTTTTTGTAC