Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0186900-03
CDS Infomation	cds chromosome:IRGSP-1.0:1:4646752:4647956:1 gene:Os01g0186900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to cDNA clone:001-117-G12, full insert sequence. (Os01t0186900-01);Similar to transposon protein CACTA, En/Spm sub-class. (Os01t0186900-02);Similar to cDNA clone:001-117-G12, full insert sequence. (Os01t0186900-03)
Sequence	AGTAGCGGGAGTAATGAGGGTGGGCAGGAGGAGGTGTCTGAGGCGGCGGCGGCCATGGCG GCGGCGGTGGGGAGGGGTGGGGGGAGGAGGCTGTGGGTGAAGGAGAGGGACTCGGAGTGG TGGGACATGGTGAGTAGCCCGGATTACCCGGACTCGGAGTTCAGGAAGGCGTTCCGCATG TCCAAGGCCACGTTCGAGGTGGTCTGCGACGAGCTCGCCGCCGCCGTCGCCAAGGAGGAC ACCATGCTCCGCGCCGCCATCCCGGTGCGCAAGCGCGTCGCCGTCTGCGTCTGGCGCCTC GCCACGGGGGAGCCCCTGAGGCTGGTGTCCAAGCGCTTCGGCCTCGGGATCTCCACCTGC CACAAGCTCGTGCTCGAGGTCTGCGCCGCGCTCAAGGCCATGGTGATGCCCAAGGTGGTG CGCTGGCCCGAGGCCGGCGACGCGGCGGCCATCGCCGCGCACTTCGAGGCCATCTCCGGG ATCTCCGGCGTCGTCGGCGCGATCTACACCACCCACATCCCCATCATCGCGCCCAAGTCC AACGTCGCCTCCTACTACAACCGCCGCCACACGGAGCGCAACCAGAAGACCTCCTACTCC ATGACCGTCCAGTGCGTCGTCGACTCCACCGGCGCCTTCACCGACGTCTGCATCGGCTGG CCGGGGTCCAACTCCGACGAGGAGGTGCTCGAGAAGTCGGCGCTGTACCTGCACCGCGGC GTTCCCGGCCTGATCCAGGGCCAGTGGGTGGTCGGCGGCGGGAGCTTCCCGCTCATGGAC TGGATGCTCGTGCCCTACACCCACCAGAACCTGACGTGGGCGCAGCACATGCTCAACGAG AAGGTCGCCGCCGTGCGCGGCGTGGCGCGCGACGCGTTCGAGCGCCTCAAGCGCCGGTGG GGCTGCCTCCAGAAGCGCACCGAGGTGAAGCTGCTCGACCTCCCCACCGTGCTCGGCGCC TGCTGCGTCCTCCACAACATCTGCGAGCGCAGCGGCGACGCCGTCGTCGACGCCGACGAC TGCGCCTTCGACCTCTTCGACGACGACATGGTCGCCGAGAACGCCGTCCGCTCCTCCGCC GCCGCGCAGGCCCGCGACGCCATCGCCCACAACCTCCTCCACAGCGGCGGCGGCGCATCC TTCTTCTGA

Peptide Sequence

PEP ID	Os01t0186900-03
PEP Infomation	pep chromosome:IRGSP-1.0:1:4646752:4647956:1 gene:Os01g0186900 transcript:Os01t0186900-03 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to cDNA clone:001-117-G12, full insert sequence. (Os01t0186900-01);Similar to transposon protein CACTA, En/Spm sub-class. (Os01t0186900-02);Similar to cDNA clone:001-117-G12, full insert sequence. (Os01t0186900-03)
Sequence	SSGSNEGGQEEVSEAAAAMAAAVGRGGGRRLWVKERDSEWWDMVSSPDYPDSEFRKAFRM SKATFEVVCDELAAAVAKEDTMLRAAIPVRKRVAVCVWRLATGEPLRLVSKRFGLGISTC HKLVLEVCAALKAMVMPKVVRWPEAGDAAAIAAHFEAISGISGVVGAIYTTHIPIIAPKS NVASYYNRRHTERNQKTSYSMTVQCVVDSTGAFTDVCIGWPGSNSDEEVLEKSALYLHRG VPGLIQGQWVVGGGSFPLMDWMLVPYTHQNLTWAQHMLNEKVAAVRGVARDAFERLKRRW GCLQKRTEVKLLDLPTVLGACCVLHNICERSGDAVVDADDCAFDLFDDDMVAENAVRSSA AAQARDAIAHNLLHSGGGASFF

Transcript Sequence

Transcript ID	Os01t0186900-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:4646752:4647956:1 gene:Os01g0186900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to cDNA clone:001-117-G12, full insert sequence. (Os01t0186900-01);Similar to transposon protein CACTA, En/Spm sub-class. (Os01t0186900-02);Similar to cDNA clone:001-117-G12, full insert sequence. (Os01t0186900-03)
Sequence	ATAGTAGCGGGAGTAATGAGGGTGGGCAGGAGGAGGTGTCTGAGGCGGCGGCGGCCATGG CGGCGGCGGTGGGGAGGGGTGGGGGGAGGAGGCTGTGGGTGAAGGAGAGGGACTCGGAGT GGTGGGACATGGTGAGTAGCCCGGATTACCCGGACTCGGAGTTCAGGAAGGCGTTCCGCA TGTCCAAGGCCACGTTCGAGGTGGTCTGCGACGAGCTCGCCGCCGCCGTCGCCAAGGAGG ACACCATGCTCCGCGCCGCCATCCCGGTGCGCAAGCGCGTCGCCGTCTGCGTCTGGCGCC TCGCCACGGGGGAGCCCCTGAGGCTGGTGTCCAAGCGCTTCGGCCTCGGGATCTCCACCT GCCACAAGCTCGTGCTCGAGGTCTGCGCCGCGCTCAAGGCCATGGTGATGCCCAAGGTGG TGCGCTGGCCCGAGGCCGGCGACGCGGCGGCCATCGCCGCGCACTTCGAGGCCATCTCCG GGATCTCCGGCGTCGTCGGCGCGATCTACACCACCCACATCCCCATCATCGCGCCCAAGT CCAACGTCGCCTCCTACTACAACCGCCGCCACACGGAGCGCAACCAGAAGACCTCCTACT CCATGACCGTCCAGTGCGTCGTCGACTCCACCGGCGCCTTCACCGACGTCTGCATCGGCT GGCCGGGGTCCAACTCCGACGAGGAGGTGCTCGAGAAGTCGGCGCTGTACCTGCACCGCG GCGTTCCCGGCCTGATCCAGGGCCAGTGGGTGGTCGGCGGCGGGAGCTTCCCGCTCATGG ACTGGATGCTCGTGCCCTACACCCACCAGAACCTGACGTGGGCGCAGCACATGCTCAACG AGAAGGTCGCCGCCGTGCGCGGCGTGGCGCGCGACGCGTTCGAGCGCCTCAAGCGCCGGT GGGGCTGCCTCCAGAAGCGCACCGAGGTGAAGCTGCTCGACCTCCCCACCGTGCTCGGCG CCTGCTGCGTCCTCCACAACATCTGCGAGCGCAGCGGCGACGCCGTCGTCGACGCCGACG ACTGCGCCTTCGACCTCTTCGACGACGACATGGTCGCCGAGAACGCCGTCCGCTCCTCCG CCGCCGCGCAGGCCCGCGACGCCATCGCCCACAACCTCCTCCACAGCGGCGGCGGCGCAT CCTTCTTCTGATCAAGCATCATCGCCGTTCTTGGTCCGATCAACAGCGATACCAAACAAA CCAAC