Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0186700-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:4621925:4631262:-1 gene:Os01g0186700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Protein kinase GhCLK1 (Fragment). (Os01t0186700-01)
Sequence	ATGGAGAGCGAGATGGCGGACGCGGCGCCGGCACCGGCGGTGGCGGCGGCGGCGACGGCG GAGCCGCTGGCGGCGGTGGCGGAGGAAGGGGAGGAAGGCGGGGAGGCGGCGGTGGGGTCC ACCCTCACCATGGAGCGCGTCGCCGCGGCGAAGAAGTTCATCGAGAACCACTACCGCTCG CAGATGAAGAACATCCAGGAGCGCAAGGAGAGGCGCTTTAGATTGGAGCGACAACTGGAA TCTTCCCAAGTTCCCAGGGAGCAGCAAATCAATCTACTAAAAGATCTGGAGAGAAAGGAA ACAGAGTACATGCGGCTTAAAAGGCACAAAATCTGCGTTGATGACTTTGAGCTGCTCACC ATTATTGGCAGAGGAGCTTTTGGAGAGGTTCGACTCTGCCGGGAGAAGACATCTAGCAAC ATTTATGCAATGAAAAAGCTAAAGAAGTCTGATATGGTTGTCAGGGGTCAAGTGGAACAT GTTAGAGCGGAAAGAAACTTGCTGGCTGAAGTTGCTAGCCACTGCATTGTGAAGCTATAC TATTCTTTTCAAGATTCGGAGTACCTTTATCTTATCATGGAGTATCTCCCTGGTGGTGAT ATCATGACCCTTCTCATGAGAGAGGATACCTTAACTGAGCATGTGGCTCGATTCTACATT GCTGAGACCATCCTTGCTATTGAGTCCATTCATAAACACAACTACATCCACAGAGATATT AAGCCTGACAACCTGCTTCTCGACAAGAATGGTCACATGAAGCTGTCAGATTTTGGGCTG TGCAAGCCAATTGATTGTTCAAAGCTCTCAACATTGAATGAAGATGAACCGATGGGTGAT GACAATTTGAGGGAATCAATGGATATCGATAGCTCTTTCTCTGAAACAACAAATGGTAGA AGGTGGAGAAGTCAACATGAACAACTTCAGCACTGGCAGATGAACAGAAGAAAACTGGCA TTCTCAACTGTTGGGACACCAGACTATATTGCTCCAGAAGTTCTGCTAAAGAAGGGATAT GGAATGGAATGTGACTGGTGGTCTTTGGGTGCAATCATGTATGAGATGCTTGTTGGTTAT CCACCATTTTATTCTGATGATCCAATAACCACATGCCGAAAGATTGTCCACTGGAGAAAC CATTTGAAATTTCCAGAGGATTCAAAGGTGTCTCCTGAAGCAAGGGATCTCATTTGCCGG TTATTATGTGATGTTGACCACAGGATTGGCAGTGCAGGAGCAGACCAAATAAAGGCACAT CCTTGGTTCCGTGGAGTTGCTTGGGAAAAACTATATGAGATGGAAGCTGCATTTAAGCCT CAAGTAAATGATGAACTGGACACACAGAACTTCATGAAGTTTGAGGAAATGGATAATGCT CCAACCAGAACAGGTTCCGGGCCCTCAAGAAAGATGATGCTGAATTCCAAAGACCTCAGC TTTGTGGGATATACGTACAAAAACTTTGATGCTGTGAAAGGATTGAAACATTCAGATCAA CAAAGGAACCAATCTCTAATAAGGCCCTCTATTGGCTCCATTTTTGGTCCAGCAGATATG GATCCATCTAGAGAACCAAATGGAAGGGACAAGCACATGCACACAGTTTCTTCTGGTGAT CCGATGATTCAATGA

Peptide Sequence

PEP ID	Os01t0186700-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:4621925:4631262:-1 gene:Os01g0186700 transcript:Os01t0186700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Protein kinase GhCLK1 (Fragment). (Os01t0186700-01)
Sequence	MESEMADAAPAPAVAAAATAEPLAAVAEEGEEGGEAAVGSTLTMERVAAAKKFIENHYRS QMKNIQERKERRFRLERQLESSQVPREQQINLLKDLERKETEYMRLKRHKICVDDFELLT IIGRGAFGEVRLCREKTSSNIYAMKKLKKSDMVVRGQVEHVRAERNLLAEVASHCIVKLY YSFQDSEYLYLIMEYLPGGDIMTLLMREDTLTEHVARFYIAETILAIESIHKHNYIHRDI KPDNLLLDKNGHMKLSDFGLCKPIDCSKLSTLNEDEPMGDDNLRESMDIDSSFSETTNGR RWRSQHEQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGY PPFYSDDPITTCRKIVHWRNHLKFPEDSKVSPEARDLICRLLCDVDHRIGSAGADQIKAH PWFRGVAWEKLYEMEAAFKPQVNDELDTQNFMKFEEMDNAPTRTGSGPSRKMMLNSKDLS FVGYTYKNFDAVKGLKHSDQQRNQSLIRPSIGSIFGPADMDPSREPNGRDKHMHTVSSGD PMIQ

Transcript Sequence

Transcript ID	Os01t0186700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:4621925:4631262:-1 gene:Os01g0186700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Protein kinase GhCLK1 (Fragment). (Os01t0186700-01)
Sequence	GGTGGGTGGTGGTGGCGGCGGCGGCGATGGAGAGCGAGATGGCGGACGCGGCGCCGGCAC CGGCGGTGGCGGCGGCGGCGACGGCGGAGCCGCTGGCGGCGGTGGCGGAGGAAGGGGAGG AAGGCGGGGAGGCGGCGGTGGGGTCCACCCTCACCATGGAGCGCGTCGCCGCGGCGAAGA AGTTCATCGAGAACCACTACCGCTCGCAGATGAAGAACATCCAGGAGCGCAAGGAGAGGC GCTTTAGATTGGAGCGACAACTGGAATCTTCCCAAGTTCCCAGGGAGCAGCAAATCAATC TACTAAAAGATCTGGAGAGAAAGGAAACAGAGTACATGCGGCTTAAAAGGCACAAAATCT GCGTTGATGACTTTGAGCTGCTCACCATTATTGGCAGAGGAGCTTTTGGAGAGGTTCGAC TCTGCCGGGAGAAGACATCTAGCAACATTTATGCAATGAAAAAGCTAAAGAAGTCTGATA TGGTTGTCAGGGGTCAAGTGGAACATGTTAGAGCGGAAAGAAACTTGCTGGCTGAAGTTG CTAGCCACTGCATTGTGAAGCTATACTATTCTTTTCAAGATTCGGAGTACCTTTATCTTA TCATGGAGTATCTCCCTGGTGGTGATATCATGACCCTTCTCATGAGAGAGGATACCTTAA CTGAGCATGTGGCTCGATTCTACATTGCTGAGACCATCCTTGCTATTGAGTCCATTCATA AACACAACTACATCCACAGAGATATTAAGCCTGACAACCTGCTTCTCGACAAGAATGGTC ACATGAAGCTGTCAGATTTTGGGCTGTGCAAGCCAATTGATTGTTCAAAGCTCTCAACAT TGAATGAAGATGAACCGATGGGTGATGACAATTTGAGGGAATCAATGGATATCGATAGCT CTTTCTCTGAAACAACAAATGGTAGAAGGTGGAGAAGTCAACATGAACAACTTCAGCACT GGCAGATGAACAGAAGAAAACTGGCATTCTCAACTGTTGGGACACCAGACTATATTGCTC CAGAAGTTCTGCTAAAGAAGGGATATGGAATGGAATGTGACTGGTGGTCTTTGGGTGCAA TCATGTATGAGATGCTTGTTGGTTATCCACCATTTTATTCTGATGATCCAATAACCACAT GCCGAAAGATTGTCCACTGGAGAAACCATTTGAAATTTCCAGAGGATTCAAAGGTGTCTC CTGAAGCAAGGGATCTCATTTGCCGGTTATTATGTGATGTTGACCACAGGATTGGCAGTG CAGGAGCAGACCAAATAAAGGCACATCCTTGGTTCCGTGGAGTTGCTTGGGAAAAACTAT ATGAGATGGAAGCTGCATTTAAGCCTCAAGTAAATGATGAACTGGACACACAGAACTTCA TGAAGTTTGAGGAAATGGATAATGCTCCAACCAGAACAGGTTCCGGGCCCTCAAGAAAGA TGATGCTGAATTCCAAAGACCTCAGCTTTGTGGGATATACGTACAAAAACTTTGATGCTG TGAAAGGATTGAAACATTCAGATCAACAAAGGAACCAATCTCTAATAAGGCCCTCTATTG GCTCCATTTTTGGTCCAGCAGATATGGATCCATCTAGAGAACCAAATGGAAGGGACAAGC ACATGCACACAGTTTCTTCTGGTGATCCGATGATTCAATGACCTGCGTCCCGTTGTTCCT TGGAAAATCCTGAACTAAAATTAGCATGCGACGCCTGAACGATGTGGCTTCATCCGGAGA ACCTGCTTGTTTTAGGCCAGGTTATCTGCCCTGTTAATCGTTGGCGAGCATTCTGTAGAA ATCCAACAAAGCTTCTAGTTGTAAAAATAGTATGCTGAGTACTTAACAAAACAGCCCGTG TACCCAGGGGGGCTTGTGGTCTTTGTTGTAGCGTGTTGGGACCAAGCGGAAATGGGCAGG TTGGGGGGAGTATTTGCACCTTTGGGGGCTGGCTGCCCAGGTTGGCAGAGCTAATTGCCG CCTTCTCTTGTGGCAGTTCCTGGTCCGCTGACATTTTCATCTTGTGG