Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0185100-00
CDS Infomation

cds chromosome:IRGSP-1.0:1:4509219:4512681:1 gene:Os01g0185100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os01t0185100-00)
Sequence

TTTGCAGGAGGCTCTGCGCGACAACGACGGCGGCGGAAGCGGCAGCGGCGGCGGCGTCAT
CGATCAAATCGAAGAAGCCGTCAAGAAGTTGTGACAACGTTGATAGCACCTGCTGCAGCT
GCTGGGGCGTTGACCTATGGTTACATGCGCTGGAAAGGCATATCTATTGCTAGTCTGATG
TATGTCACCAAGCAAAATATGGCTAATGCTGTTGCAAGCATGACCAAGCATTTGGAACAA
GTGCAGAGCTCTCTTGCAGCTGCTAAAAGGCACTTAACCCAGCGCATTCAACATTTGGAT
GATAAGTTGGATCAGCAGAAACAGATTTCCGGGCAAATAAAAGAGGAGGTTACTGGTGCA
CGATTGAAACTCCAGGATATTGGTTCCGAAATGCAAAAGATCAAACAAGTGGCTCATGGC
CTGGGTGGAAAGTTGGATTCAATTGAAGCAAAACAGAACTATTCATTGGCCGGTGTGATG
TACCTCGTCGAATTCATAGAGCAAAACGGTGGGAGGTTGCCTCGTAGCGTGGTAAGTCTT
AAGCACACCATACAACAATCCACGCATTACGCATTACGGATTAAAAACCTGTAG

Peptide Sequence

PEP ID

Os01t0185100-00
PEP Infomation

pep chromosome:IRGSP-1.0:1:4509219:4512681:1 gene:Os01g0185100 transcript:Os01t0185100-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os01t0185100-00)
Sequence

FAGGSARQRRRRKRQRRRRHRSNRRSRQEVVTTLIAPAAAAGALTYGYMRWKGISIASLM
YVTKQNMANAVASMTKHLEQVQSSLAAAKRHLTQRIQHLDDKLDQQKQISGQIKEEVTGA
RLKLQDIGSEMQKIKQVAHGLGGKLDSIEAKQNYSLAGVMYLVEFIEQNGGRLPRSVVSL
KHTIQQSTHYALRIKNL

Transcript Sequence

Transcript ID

Os01t0185100-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:4509219:4512681:1 gene:Os01g0185100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os01t0185100-00)
Sequence

GCAGCAATGGCGCTAGTGCAGGTGGGTATGGGGTTGGGCCGCGTCGTCCTCCTCGTCGGC
GCCGGCATGGCCGGCTCGGTCGTCATCCGCGACGGCCGCTTCGCCGACTTCGTCGCGGGG
CTCCAGGTGCGTGTGCGATTCCGGCTTAGTTTCGCGACGTTGATCCGGCGGGGGATCTGA
TCGATTCGCCGTTGGTTTAATTTGCAGGAGGCTCTGCGCGACAACGACGGCGGCGGAAGC
GGCAGCGGCGGCGGCGTCATCGATCAAATCGAAGAAGCCGTCAAGAAGTTGTGACAACGT
TGATAGCACCTGCTGCAGCTGCTGGGGCGTTGACCTATGGTTACATGCGCTGGAAAGGCA
TATCTATTGCTAGTCTGATGTATGTCACCAAGCAAAATATGGCTAATGCTGTTGCAAGCA
TGACCAAGCATTTGGAACAAGTGCAGAGCTCTCTTGCAGCTGCTAAAAGGCACTTAACCC
AGCGCATTCAACATTTGGATGATAAGTTGGATCAGCAGAAACAGATTTCCGGGCAAATAA
AAGAGGAGGTTACTGGTGCACGATTGAAACTCCAGGATATTGGTTCCGAAATGCAAAAGA
TCAAACAAGTGGCTCATGGCCTGGGTGGAAAGTTGGATTCAATTGAAGCAAAACAGAACT
ATTCATTGGCCGGTGTGATGTACCTCGTCGAATTCATAGAGCAAAACGGTGGGAGGTTGC
CTCGTAGCGTGGTAAGTCTTAAGCACACCATACAACAATCCACGCATTACGCATTACGGA
TTAAAAACCTGTAG