Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0184800-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:4494615:4497597:-1 gene:Os01g0184800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thioredoxin fold domain containing protein. (Os01t0184800-01)
Sequence

ATGGCGGACTACCACTTCGTGTACAAGGACGTGGAGGGGGCGAGCACGGAGTGGGACGAC
ATCCAGCGACGCCTGGGGAACCTGCCGCCGAAGCCGGAGCCGTTCAAGCCGCCGGCGTAC
GCGCCCAAGGTCGACGCCGACGAGCAGCCCAAGTCCAAGGAATGGCTCGACGAGCGGGAG
CCCGACGAGCTGGAGGATCTCGAGGACGACCTCGACGACGACCGCTTCCTCGAGCAGTAT
AGGAGGATGAGGCTTGCAGAGCTCAGGGAGGCAGCAAAGGCCGCGAAATTCGGCTCTATT
GTGCCTATCACTGGCTCTGATTTTGTCCGAGAGGTCTCCCAGGCCCCATCCGATGTCTGG
GTTGTGGTCTTCCTCTACAAGGATGGAATACCAGAATGTGGGTTGCTTCAGACTTGTCTG
GATGAATTGGCTACAAGATACCCAGCAACTAAGTTTGTTAAAATCATCTCTACAGACTGC
ATTCCCAACTACCCAGATCGAAATGTCCCTACTATACTTGTGTACAATAACAGTGCTGTT
AAAGGGACTTATGTCGGTCTGCAGAAGTTTGGTGGAAAAAGATGCACACCTGAGTCTGTT
GCATTGGCCCTTTGCCAGTCAGAGCCAGTCCTGAATGATGGGCAGAGCGGCGGTGATTCA
TCCCGGGACAATGTCATAGAAGGCGTTCGCAGGAAGTTCATCGAAAAGGTTGTCGCCCAG
CATGAAGAGCGGGAGGAAGATGACGATAGTGACTAA

Peptide Sequence

PEP ID

Os01t0184800-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:4494615:4497597:-1 gene:Os01g0184800 transcript:Os01t0184800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thioredoxin fold domain containing protein. (Os01t0184800-01)
Sequence

MADYHFVYKDVEGASTEWDDIQRRLGNLPPKPEPFKPPAYAPKVDADEQPKSKEWLDERE
PDELEDLEDDLDDDRFLEQYRRMRLAELREAAKAAKFGSIVPITGSDFVREVSQAPSDVW
VVVFLYKDGIPECGLLQTCLDELATRYPATKFVKIISTDCIPNYPDRNVPTILVYNNSAV
KGTYVGLQKFGGKRCTPESVALALCQSEPVLNDGQSGGDSSRDNVIEGVRRKFIEKVVAQ
HEEREEDDDSD

Transcript Sequence

Transcript ID

Os01t0184800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:4494615:4497597:-1 gene:Os01g0184800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thioredoxin fold domain containing protein. (Os01t0184800-01)
Sequence

TCTCGTCTTTCCCATCTCGCGGCGGCTGCGTCTCTCTCTCGATCTCTCGGCGGCGGCCAT
GGCGGACTACCACTTCGTGTACAAGGACGTGGAGGGGGCGAGCACGGAGTGGGACGACAT
CCAGCGACGCCTGGGGAACCTGCCGCCGAAGCCGGAGCCGTTCAAGCCGCCGGCGTACGC
GCCCAAGGTCGACGCCGACGAGCAGCCCAAGTCCAAGGAATGGCTCGACGAGCGGGAGCC
CGACGAGCTGGAGGATCTCGAGGACGACCTCGACGACGACCGCTTCCTCGAGCAGTATAG
GAGGATGAGGCTTGCAGAGCTCAGGGAGGCAGCAAAGGCCGCGAAATTCGGCTCTATTGT
GCCTATCACTGGCTCTGATTTTGTCCGAGAGGTCTCCCAGGCCCCATCCGATGTCTGGGT
TGTGGTCTTCCTCTACAAGGATGGAATACCAGAATGTGGGTTGCTTCAGACTTGTCTGGA
TGAATTGGCTACAAGATACCCAGCAACTAAGTTTGTTAAAATCATCTCTACAGACTGCAT
TCCCAACTACCCAGATCGAAATGTCCCTACTATACTTGTGTACAATAACAGTGCTGTTAA
AGGGACTTATGTCGGTCTGCAGAAGTTTGGTGGAAAAAGATGCACACCTGAGTCTGTTGC
ATTGGCCCTTTGCCAGTCAGAGCCAGTCCTGAATGATGGGCAGAGCGGCGGTGATTCATC
CCGGGACAATGTCATAGAAGGCGTTCGCAGGAAGTTCATCGAAAAGGTTGTCGCCCAGCA
TGAAGAGCGGGAGGAAGATGACGATAGTGACTAAACATACTCTCCTAGTATGTCTCAGTT
CACTGATACTATTGATGATGTGGGTCAAGTTTTGCCTGAGATCACTAATTGTACTCATAT
TTGGTTCTGTTCTGAAAATGCTGAATTTTCTCTCTACGATGAGCTGCAAAAACTCAGGTT
TAGCAGCAGCTTGTTGTGGTACATGTGGTAAATTGGTAATGTATCCTGGTGTTCCTTGTA
TTGATTGTGGCACTTTCAGCTAAAATGAAAATGGATAAATTTCATGG