Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0182600-03
CDS Infomation	cds chromosome:IRGSP-1.0:1:4329362:4338444:-1 gene:Os01g0182600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GIGANTEA description:GIGANTEA protein. (Os01t0182600-01);GIGANTEA protein. (Os01t0182600-03)
Sequence	ATGTCAGCTTCAAATGAGAAGTGGATTGATGGGCTCCAGTTCTCATCACTGTTCTGGCCC CCACCACAGGATTCACAACAAAAACAGGCACAAATTCTGGCCTATGTTGAGTACTTTGGC CAGTTTACAGCTGACAGTGAGCAATTCCCTGAAGATATAGCTCAGCTAATTCAAAGTTGC TATCCATCAAAAGAAAAGCGCCTTGTAGATGAAGTATTAGCAACTTTTGTTCTTCATCAT CCTGAGCATGGCCATGCAGTTGTGCATCCGATTCTGTCACGCATCATAGATGGGACACTC AGTTATGATAGAAATGGTTTCCCGTTCATGTCCTTCATCTCTTTATTTAGCCATACTTCT GAGAAAGAGTACTCGGAGCAGTGGGCCTTGGCCTGTGGAGAAATTCTTAGAGTTCTAACT CACTACAACAGGCCAATCTTCAAAGTTGATCACCAACATAGTGAAGCGGAATGTAGCAGC ACATCTGATCAGGCCTCATCATGTGAGTCTATGGAGAAAAGGGCTAACGGTTCTCCAAGA AATGAACCTGACCGGAAGCCATTGAGGCCACTATCTCCTTGGATCACAGACATATTGCTT GCTGCACCTCTGGGTATTAGAAGTGACTATTTTAGATGGTGTGGTGGAGTCATGGGAAAA TACGCAGCTGGTGGAGAATTGAAGCCTCCAACAACTGCTTACAGCCGAGGATCTGGGAAG CACCCACAACTTATGCCATCCACGCCCAGATGGGCTGTTGCCAATGGAGCTGGAGTTATA CTAAGTGTCTGTGATGAGGAAGTAGCTCGTTATGAGACAGCAAATTTGACTGCGGCAGCT GTTCCTGCACTTCTATTACCTCCACCGACCACACCATTGGACGAACATTTGGTTGCGGGG CTCCCTCCTCTTGAACCATATGCTCGCTTGTTTCATAGATACTATGCAATTGCTACTCCA AGTGCTACCCAAAGGTTGCTTTTTGGTCTTCTCGAGGCACCACCATCATGGGCCCCAGAT GCACTTGATGCAGCAGTACAGCTTGTTGAACTCCTTAGAGCAGCGGAAGATTACGATTCT GGCATGCGGCTTCCAAAGAACTGGATGCATCTTCATTTCCTGCGTGCTATTGGAACTGCA ATGTCAATGAGAGCTGGTATCGCTGCTGATACGTCTGCTGCTTTACTTTTCCGAATACTC TCCCAACCGACATTACTTTTTCCTCCACTGAGACATGCCGAAGGAGTTGAACTCCATCAT GAGCCACTAGGTGGCTATGTATCATCGTACAAAAGGCAGCTGGAAGTTCCTGCATCTGAA GCCACTATTGATGCCACTGCGCAAGGCATTGCTTCCATGCTATGTGCTCATGGTCCCGAT GTTGAGTGGAGAATATGTACCATCTGGGAGGCTGCGTATGGTTTGCTACCTCTGAGTTCA TCAGCAGTTGATTTGCCTGAAATTGTTGTAGCTGCTCCACTTCAGCCACCTACTTTGTCA TGGAGCCTATACTTGCCATTGTTGAAAGTATTTGAGTATTTACCTCGTGGGAGTCCATCT GAAGCATGCCTTATGAGAATTTTTGTGGCAACAGTTGAAGCTATACTGAGAAGAACTTTT CCATCAGAAACCTCTGAACAATCCAGGAAACCAAGAAGTCAATCTAAGAACCTTGCTGTT GCTGAACTCCGAACAATGATACATTCACTCTTTGTGGAGTCCTGTGCTTCAATGGACCTT GCGTCCAGATTACTATTTGTAGTATTAACTGTTTGCGTCAGTCATCAAGCTTTGCCTGGG GGAAGTAAAAGGCCAACTGGTAGTGATAATCATTCCTCTGAGGAGGTCACAAATGATTCG AGATTAACCAATGGAAGAAACAGATGTAAGAAGAGACAAGGACCAGTTGCTACATTCGAC TCATACGTTCTAGCAGCCGTTTGTGCCTTATCTTGTGAGCTCCAGCTGTTCCCTTTTATT TCCAAGAATGGGAACCATTCAAATCTGAAGGACTCCATAAAGATAGTCATACCTGGAAAA ACCACTGGTATCAGTAACGAGCTACACAATAGCATTAGCTCAGCGATTCTTCATACTCGT AGAATACTTGGCATCTTGGAAGCTCTGTTCTCCTTGAAGCCATCATCTGTTGGTACTTCA TGGAGTTATAGTTCAAATGAGATTGTTGCAGCAGCTATGGTTGCTGCTCATGTTTCTGAG TTATTTCGTCGATCCAGGCCATGCTTAAATGCACTGTCTGCGCTGAAGCAATGCAAGTGG GATGCTGAGATTTCTACCAGGGCATCATCCCTTTACCATTTGATTGACTTGCATGGTAAA ACAGTGACCTCCATTGTGAACAAAGCTGAGCCTCTAGAAGCTCACCTGACCCTTACACCA GTAAAAAAGGATGAACCTCCCATTGAGGAAAAGAACATTAACTCATCAGATGGTGGTGCA TTGGAAAAAAAGGATGCTTCAAGATCACACAGGAAAAATGGTTTTGCAAGACCACTCTTG AAATGTGCAGAAGATGTTATACTAAATGGTGATGTCGCAAGTACTTCTGGGAAAGCCATT GCAAGTTTACAGGTGGAAGCTTCTGATTTGGCAAACTTCCTCACCATGGACCGAAATGGG GGTTACAGAGGTTCTCAAACTCTCCTAAGATCTGTACTGTCAGAGAAGCAGGAGCTATGC TTCTCTGTTGTCTCATTGCTCTGGCAGAAGCTCATTGCATCTCCCGAAATGCAGATGTCT GCAGAAAGTACATCAGCTCATCAGGGTTGGAGAAAGGTTGTGGATGCGCTTTGTGACATT GTTTCAGCCTCACCGACCAAGGCTTCAGCTGCTATCGTTCTGCAGGCCGAGAAGGACTTG CAGCCCTGGATTGCTCGAGATGATGAGCAAGGTCAGAAGATGTGGAGAGTCAACCAGCGA ATAGTTAAGCTGATAGCAGAGCTTATGAGGAACCACGATAGCCCAGAAGCATTGGTGATC CTTGCTAGTGCTTCAGATCTTCTTCTTCGAGCAACTGATGGAATGCTTGTTGATGGTGAA GCTTGTACTTTACCACAATTAGAGCTATTGGAAGTAACCGCCAGAGCAGTCCATCTCATC GTCGAATGGGGAGATTCAGGTGTATCCGTCGCTGATGGCCTCTCCAATCTGCTGAAGTGC CGTCTATCAACCACCATCCGCTGTCTTTCGCACCCCAGCGCGCATGTCCGTGCACTCAGC ATGTCCGTCCTTCGCGACATCTTGAACAGCGGACAAATAAACTCCAGTAAGCTCATCCAA GGGGAACACCGGAATGGCATCCAGAGCCCAACCTACCAGTGCTTGGCAGCAAGCATCATC AACTGGCAAGCCGATGTGGAGAGATGCATAGAGTGGGAAGCCCACAGCCGCCGCGCCACC GGGCTGACGCTCGCCTTCCTCACCGCGGCGGCGAAGGAGCTCGGCTGCCCACTCACTTGC TGA

Peptide Sequence

PEP ID	Os01t0182600-03
PEP Infomation	pep chromosome:IRGSP-1.0:1:4329362:4338444:-1 gene:Os01g0182600 transcript:Os01t0182600-03 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GIGANTEA description:GIGANTEA protein. (Os01t0182600-01);GIGANTEA protein. (Os01t0182600-03)
Sequence	MSASNEKWIDGLQFSSLFWPPPQDSQQKQAQILAYVEYFGQFTADSEQFPEDIAQLIQSC YPSKEKRLVDEVLATFVLHHPEHGHAVVHPILSRIIDGTLSYDRNGFPFMSFISLFSHTS EKEYSEQWALACGEILRVLTHYNRPIFKVDHQHSEAECSSTSDQASSCESMEKRANGSPR NEPDRKPLRPLSPWITDILLAAPLGIRSDYFRWCGGVMGKYAAGGELKPPTTAYSRGSGK HPQLMPSTPRWAVANGAGVILSVCDEEVARYETANLTAAAVPALLLPPPTTPLDEHLVAG LPPLEPYARLFHRYYAIATPSATQRLLFGLLEAPPSWAPDALDAAVQLVELLRAAEDYDS GMRLPKNWMHLHFLRAIGTAMSMRAGIAADTSAALLFRILSQPTLLFPPLRHAEGVELHH EPLGGYVSSYKRQLEVPASEATIDATAQGIASMLCAHGPDVEWRICTIWEAAYGLLPLSS SAVDLPEIVVAAPLQPPTLSWSLYLPLLKVFEYLPRGSPSEACLMRIFVATVEAILRRTF PSETSEQSRKPRSQSKNLAVAELRTMIHSLFVESCASMDLASRLLFVVLTVCVSHQALPG GSKRPTGSDNHSSEEVTNDSRLTNGRNRCKKRQGPVATFDSYVLAAVCALSCELQLFPFI SKNGNHSNLKDSIKIVIPGKTTGISNELHNSISSAILHTRRILGILEALFSLKPSSVGTS WSYSSNEIVAAAMVAAHVSELFRRSRPCLNALSALKQCKWDAEISTRASSLYHLIDLHGK TVTSIVNKAEPLEAHLTLTPVKKDEPPIEEKNINSSDGGALEKKDASRSHRKNGFARPLL KCAEDVILNGDVASTSGKAIASLQVEASDLANFLTMDRNGGYRGSQTLLRSVLSEKQELC FSVVSLLWQKLIASPEMQMSAESTSAHQGWRKVVDALCDIVSASPTKASAAIVLQAEKDL QPWIARDDEQGQKMWRVNQRIVKLIAELMRNHDSPEALVILASASDLLLRATDGMLVDGE ACTLPQLELLEVTARAVHLIVEWGDSGVSVADGLSNLLKCRLSTTIRCLSHPSAHVRALS MSVLRDILNSGQINSSKLIQGEHRNGIQSPTYQCLAASIINWQADVERCIEWEAHSRRAT GLTLAFLTAAAKELGCPLTC

Transcript Sequence

Transcript ID	Os01t0182600-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:4329362:4338444:-1 gene:Os01g0182600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GIGANTEA description:GIGANTEA protein. (Os01t0182600-01);GIGANTEA protein. (Os01t0182600-03)
Sequence	CCGAGCCGTTTCTCTCCCTCTCTCTCTCCTCCTCCTTCCCCTGCGCCTCCTCCACCGCCC GTGTCGCCGCCGCGCGCGTCTATCCCCTCGCCGCCGCCGCCGTCTACGCCGCGTGAGGTC CGGATTGGTTGAAAGGCTGATCGAGTGTAGAGACTCTGAAGCTCATATGGTTGGCATTGG TTGATATGATAACGTGTCACGTTGTGAGATGCAGACCCCCGTTATGGGGGTTGATTGAAT GAAGTGGATAGCACTCTTATAACTTTCTTGCTCGAAGTTTCTTGATACCAAGGCAAGTAG CTTATAAGAAGATTTGGACTTTGGTGGCATAAATGGATGAACTAACTGGCGGCTTCAACG TGGTGTTGATTACAGTTTCTTGGGCAGGCTCTTGAGCTACCAAGTATGTCAGCTTCAAAT GAGAAGTGGATTGATGGGCTCCAGTTCTCATCACTGTTCTGGCCCCCACCACAGGATTCA CAACAAAAACAGGCACAAATTCTGGCCTATGTTGAGTACTTTGGCCAGTTTACAGCTGAC AGTGAGCAATTCCCTGAAGATATAGCTCAGCTAATTCAAAGTTGCTATCCATCAAAAGAA AAGCGCCTTGTAGATGAAGTATTAGCAACTTTTGTTCTTCATCATCCTGAGCATGGCCAT GCAGTTGTGCATCCGATTCTGTCACGCATCATAGATGGGACACTCAGTTATGATAGAAAT GGTTTCCCGTTCATGTCCTTCATCTCTTTATTTAGCCATACTTCTGAGAAAGAGTACTCG GAGCAGTGGGCCTTGGCCTGTGGAGAAATTCTTAGAGTTCTAACTCACTACAACAGGCCA ATCTTCAAAGTTGATCACCAACATAGTGAAGCGGAATGTAGCAGCACATCTGATCAGGCC TCATCATGTGAGTCTATGGAGAAAAGGGCTAACGGTTCTCCAAGAAATGAACCTGACCGG AAGCCATTGAGGCCACTATCTCCTTGGATCACAGACATATTGCTTGCTGCACCTCTGGGT ATTAGAAGTGACTATTTTAGATGGTGTGGTGGAGTCATGGGAAAATACGCAGCTGGTGGA GAATTGAAGCCTCCAACAACTGCTTACAGCCGAGGATCTGGGAAGCACCCACAACTTATG CCATCCACGCCCAGATGGGCTGTTGCCAATGGAGCTGGAGTTATACTAAGTGTCTGTGAT GAGGAAGTAGCTCGTTATGAGACAGCAAATTTGACTGCGGCAGCTGTTCCTGCACTTCTA TTACCTCCACCGACCACACCATTGGACGAACATTTGGTTGCGGGGCTCCCTCCTCTTGAA CCATATGCTCGCTTGTTTCATAGATACTATGCAATTGCTACTCCAAGTGCTACCCAAAGG TTGCTTTTTGGTCTTCTCGAGGCACCACCATCATGGGCCCCAGATGCACTTGATGCAGCA GTACAGCTTGTTGAACTCCTTAGAGCAGCGGAAGATTACGATTCTGGCATGCGGCTTCCA AAGAACTGGATGCATCTTCATTTCCTGCGTGCTATTGGAACTGCAATGTCAATGAGAGCT GGTATCGCTGCTGATACGTCTGCTGCTTTACTTTTCCGAATACTCTCCCAACCGACATTA CTTTTTCCTCCACTGAGACATGCCGAAGGAGTTGAACTCCATCATGAGCCACTAGGTGGC TATGTATCATCGTACAAAAGGCAGCTGGAAGTTCCTGCATCTGAAGCCACTATTGATGCC ACTGCGCAAGGCATTGCTTCCATGCTATGTGCTCATGGTCCCGATGTTGAGTGGAGAATA TGTACCATCTGGGAGGCTGCGTATGGTTTGCTACCTCTGAGTTCATCAGCAGTTGATTTG CCTGAAATTGTTGTAGCTGCTCCACTTCAGCCACCTACTTTGTCATGGAGCCTATACTTG CCATTGTTGAAAGTATTTGAGTATTTACCTCGTGGGAGTCCATCTGAAGCATGCCTTATG AGAATTTTTGTGGCAACAGTTGAAGCTATACTGAGAAGAACTTTTCCATCAGAAACCTCT GAACAATCCAGGAAACCAAGAAGTCAATCTAAGAACCTTGCTGTTGCTGAACTCCGAACA ATGATACATTCACTCTTTGTGGAGTCCTGTGCTTCAATGGACCTTGCGTCCAGATTACTA TTTGTAGTATTAACTGTTTGCGTCAGTCATCAAGCTTTGCCTGGGGGAAGTAAAAGGCCA ACTGGTAGTGATAATCATTCCTCTGAGGAGGTCACAAATGATTCGAGATTAACCAATGGA AGAAACAGATGTAAGAAGAGACAAGGACCAGTTGCTACATTCGACTCATACGTTCTAGCA GCCGTTTGTGCCTTATCTTGTGAGCTCCAGCTGTTCCCTTTTATTTCCAAGAATGGGAAC CATTCAAATCTGAAGGACTCCATAAAGATAGTCATACCTGGAAAAACCACTGGTATCAGT AACGAGCTACACAATAGCATTAGCTCAGCGATTCTTCATACTCGTAGAATACTTGGCATC TTGGAAGCTCTGTTCTCCTTGAAGCCATCATCTGTTGGTACTTCATGGAGTTATAGTTCA AATGAGATTGTTGCAGCAGCTATGGTTGCTGCTCATGTTTCTGAGTTATTTCGTCGATCC AGGCCATGCTTAAATGCACTGTCTGCGCTGAAGCAATGCAAGTGGGATGCTGAGATTTCT ACCAGGGCATCATCCCTTTACCATTTGATTGACTTGCATGGTAAAACAGTGACCTCCATT GTGAACAAAGCTGAGCCTCTAGAAGCTCACCTGACCCTTACACCAGTAAAAAAGGATGAA CCTCCCATTGAGGAAAAGAACATTAACTCATCAGATGGTGGTGCATTGGAAAAAAAGGAT GCTTCAAGATCACACAGGAAAAATGGTTTTGCAAGACCACTCTTGAAATGTGCAGAAGAT GTTATACTAAATGGTGATGTCGCAAGTACTTCTGGGAAAGCCATTGCAAGTTTACAGGTG GAAGCTTCTGATTTGGCAAACTTCCTCACCATGGACCGAAATGGGGGTTACAGAGGTTCT CAAACTCTCCTAAGATCTGTACTGTCAGAGAAGCAGGAGCTATGCTTCTCTGTTGTCTCA TTGCTCTGGCAGAAGCTCATTGCATCTCCCGAAATGCAGATGTCTGCAGAAAGTACATCA GCTCATCAGGGTTGGAGAAAGGTTGTGGATGCGCTTTGTGACATTGTTTCAGCCTCACCG ACCAAGGCTTCAGCTGCTATCGTTCTGCAGGCCGAGAAGGACTTGCAGCCCTGGATTGCT CGAGATGATGAGCAAGGTCAGAAGATGTGGAGAGTCAACCAGCGAATAGTTAAGCTGATA GCAGAGCTTATGAGGAACCACGATAGCCCAGAAGCATTGGTGATCCTTGCTAGTGCTTCA GATCTTCTTCTTCGAGCAACTGATGGAATGCTTGTTGATGGTGAAGCTTGTACTTTACCA CAATTAGAGCTATTGGAAGTAACCGCCAGAGCAGTCCATCTCATCGTCGAATGGGGAGAT TCAGGTGTATCCGTCGCTGATGGCCTCTCCAATCTGCTGAAGTGCCGTCTATCAACCACC ATCCGCTGTCTTTCGCACCCCAGCGCGCATGTCCGTGCACTCAGCATGTCCGTCCTTCGC GACATCTTGAACAGCGGACAAATAAACTCCAGTAAGCTCATCCAAGGGGAACACCGGAAT GGCATCCAGAGCCCAACCTACCAGTGCTTGGCAGCAAGCATCATCAACTGGCAAGCCGAT GTGGAGAGATGCATAGAGTGGGAAGCCCACAGCCGCCGCGCCACCGGGCTGACGCTCGCC TTCCTCACCGCGGCGGCGAAGGAGCTCGGCTGCCCACTCACTTGCTGACAAGGCCACACC ATGACTGTCACTGCAAGCAGCTGCTGTAGGATCAGCGAGTAGGAAAGGATGACTTGCCGG CCAGTTTCCTGAGATGTGATTTAAGACTGATATTAGCTGATGTTCCCAAGCATGATACGG GGCTTGCTCCCAAGATGTGATTTTTACTTTACTTTTGGTTAATGTGCTACCGCTGACATT AGATGTTCAAGCATATGAAAACTGCTTGTGCTGTAACTTGTATGTCTGTAACGTAAAAAT CTTTCCATATGGTAACCGGGGAAGCAGAGGTATATCCTTTTCTGCTGTTGTATCTATTTC CAGTTTCCTGCTGAACTTGCAAATGAATATTCAGCAATTTCCGTTTTGCTC