Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0182300-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:4318039:4318780:-1 gene:Os01g0182300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lipocalin domain containing protein. (Os01t0182300-01)
Sequence

ATGGACGCCGTCGGCGGCGGCGGCTACAGCCCGCGCTTCCAGCGCCAGGCCTCCTGCTCC
TGCGCCCCCTCCATCTCCATGTCCCGCCGCTACGTCCGCGGCGGCTTCGACCTCGCGGGC
GACTACGACGACGACGACGAGGAGGAGTACGGCTACCTCGGCGCCGGGGTGTTCGACGGT
GTCCACCACGCCGACGGGAAGCCCGGCGCGGCGTCCCGCGGCGCGGGGGCTCCTGCGTCG
GCGTCGGCGTCGTCGGGGCGCGGGTGCGGGACGAGGCTGAAGGGCCTGTGGCGGCGGATC
CTGCGGGAGAACAAGAAGCGGATCCTGCTCTGCGCCACCGGCTGCGTTCCGGCGTCGTCG
TCGGCGGCGGCGGCGGCGAGGGTGCCCTACGACGCCTACAGCTACGCGCAGAACTTCGAC
GACGGCGCGGCGTGGGTGGAGCCGGAGAACCTCTCGCGCTCCTTCTCCGCGCGCTTCGCC
GTCCCGTCGAGGGTGCTGCAGCGGGTCGCCGTGTAG

Peptide Sequence

PEP ID

Os01t0182300-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:4318039:4318780:-1 gene:Os01g0182300 transcript:Os01t0182300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lipocalin domain containing protein. (Os01t0182300-01)
Sequence

MDAVGGGGYSPRFQRQASCSCAPSISMSRRYVRGGFDLAGDYDDDDEEEYGYLGAGVFDG
VHHADGKPGAASRGAGAPASASASSGRGCGTRLKGLWRRILRENKKRILLCATGCVPASS
SAAAAARVPYDAYSYAQNFDDGAAWVEPENLSRSFSARFAVPSRVLQRVAV

Transcript Sequence

Transcript ID

Os01t0182300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:4318039:4318780:-1 gene:Os01g0182300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lipocalin domain containing protein. (Os01t0182300-01)
Sequence

CTTCTTCTTCTTCTCCCTCACATTCTCTCACACTCCGATCGCTCTCGCCATGGACGCCGT
CGGCGGCGGCGGCTACAGCCCGCGCTTCCAGCGCCAGGCCTCCTGCTCCTGCGCCCCCTC
CATCTCCATGTCCCGCCGCTACGTCCGCGGCGGCTTCGACCTCGCGGGCGACTACGACGA
CGACGACGAGGAGGAGTACGGCTACCTCGGCGCCGGGGTGTTCGACGGTGTCCACCACGC
CGACGGGAAGCCCGGCGCGGCGTCCCGCGGCGCGGGGGCTCCTGCGTCGGCGTCGGCGTC
GTCGGGGCGCGGGTGCGGGACGAGGCTGAAGGGCCTGTGGCGGCGGATCCTGCGGGAGAA
CAAGAAGCGGATCCTGCTCTGCGCCACCGGCTGCGTTCCGGCGTCGTCGTCGGCGGCGGC
GGCGGCGAGGGTGCCCTACGACGCCTACAGCTACGCGCAGAACTTCGACGACGGCGCGGC
GTGGGTGGAGCCGGAGAACCTCTCGCGCTCCTTCTCCGCGCGCTTCGCCGTCCCGTCGAG
GGTGCTGCAGCGGGTCGCCGTGTAGACGACGACGACGGCGACGGCAGCGGCGGCGGCGGC
GGCGGCGGCGATCGTCGGAGAGAAAACCGGTGGCTTTCTCGTTCTTGATTTTCTTTTTCT
CTCAATTTCTCTCCTTTTCTTCTCCTCCTCCTCCTCCTCCCAATTTTGGAGTCAAAAATT
GTGAGAAATCATATCTGTCCCC