Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0181000-00
CDS Infomation	cds chromosome:IRGSP-1.0:1:4272846:4276299:-1 gene:Os01g0181000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Frigida-like domain containing protein. (Os01t0181000-00)
Sequence	ATGGCCGCCACCGGCGATTCCGCCGCCGCCGCCGGCGAGGTCCGGCGCCTCCTCGCCCAC CTCGACTCCCACCAGCAGCTCCTCGCCTCCTGCCACGACGCCTGGTCGCGCGCGCTCGCC CACTTCGCCTCGCTCGACGAGGACCTCGCCGCCCGCTCCGCGTCGCTCGACGACGCCCTA GCCGCCGCGGGCGCCTCCACCTCCGAGTCCCTCGCGGCGCTCGAGGCCCGCGAGGCCGCC GTCCCGGCGCGCCTCGCCGAGGCCGAGGCGGCGCTGTCCGCGGCCGTCGCGGAGGCCGGG TCCGCGGAGCCCCCGCCCGCCGACGTCCGCGGCGCGCTCCGGTGGATGTGCGGCCGCATG GACGCCCCCGCGCTGTGGCGCTTCATGGCGGCGCGGCGGCGGGAGCTCGCCGCCGTCCGG AAGGAGGTCGGCCCCGCCGTCGCCGCGTCGGTCGACCCGCCCCGCCTCGTGCTCGACGCC CTCGCCGACTTCTTGGCCGCGGAGGATGGTGCAGGTGAGGACCAGTTCTGGGTGCTCGGC ATACTGCTGCGCTCGTTGTTTGATTCCGATGGCCGGAAGCCGCCGGAGATAGGAGATACG CTGGTTGAGAGGGCGGCCGGAGTTGCCAAGAATTGGTCAGAGAAATTTGGGATCAAGATG GAATTGTATGCACCGGATAACAATGAGGTGGAGATGACAGAAGCGCCTTTGGTGGAGAAC GCAACAGCGACAGAGAAGAAAGAAGAGCATGTAGATGAGGAAGAAGAGGAGGAAGAGGAG GACCCAGAGGAAATGGTGCCCGCGTCGGAGGAAGAGGCAGATGCAGAGGAGGTAGAGAAG GAAGAAGAGGACCCAGAGGAAGTAGAGAAGGAAGGAGGAGAGGCGGAAGCCAAGGTGGCC AATGCGGCGAAGACAGGGGAAGTAGAGAAGAGGAAAGTCGAGGAAGATAAGAAGGCGTCG GGAAGAGAGGTGAAGGAGGGAGAGAAGGGTGGACAGGCAGAGGTGCAGATATTCCTGCAG ATGGTTGCTGCATTTGGACTAAAAGATAGGTATGATGTAGATTTCTTGAGGCGGCTATTA GTTGATAATGGACGGAGGAGGGAACTTGCCAGAATCGCTTGCGTCCTTGGTTTCGAGGAT AGCCTCAGAGATGTTATTGAGGAATTCATAAAGTCAGGAAATGAGATAGAAGCTATTCAT ATCGCCCATGAGGCTGGTTTGCTTGAGCGATTTCCACCTGTACCGCTTCTTAAGTCTTAT ATAAAGAGAATAACTAACAAGACTCAGGTTGCACTGAGAGGTGGAAGACATTCAAATTCT GTTGTGGAAGAGGCAAACAACTCGGAGTGCAACGCCTACAAGTCCATCATCAGGTGTGTC GAGACATGCCAGCTAACATCAGCATTTAACCTCGATGGCATAAGGAAGAAGGTCGCAAGG ATGGAGAAAGAGAAGGCTGACAGGAGGAAGCCGAGTGGCATGAACAGATTCCAGAACAAC AAGCGAGCTCGGGGAGCATCCGGGCCTCAGTCCTTCCCTCCCTCCAAGTACTCAAGGGGC TCGAACTCGAACTACGGGTCATCTTTTCGGAACCCGGCCTCCCACTCTTTCCCCTACACC GATCGTGCCGGTTTTGTCGGACCGGCACCAGGTGCTCGGCCGCACTTCGCACCGGGAAGC TCCATGGGCACGCGCCGTGCTGGGGTGCTGTACGGTGGACCTGGAGCGACATTTGGAGCC GGCCATGGCTATGGTGCTGGTGCTGGGCATCAATCTTACCATCACTAA

Peptide Sequence

PEP ID	Os01t0181000-00
PEP Infomation	pep chromosome:IRGSP-1.0:1:4272846:4276299:-1 gene:Os01g0181000 transcript:Os01t0181000-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Frigida-like domain containing protein. (Os01t0181000-00)
Sequence	MAATGDSAAAAGEVRRLLAHLDSHQQLLASCHDAWSRALAHFASLDEDLAARSASLDDAL AAAGASTSESLAALEAREAAVPARLAEAEAALSAAVAEAGSAEPPPADVRGALRWMCGRM DAPALWRFMAARRRELAAVRKEVGPAVAASVDPPRLVLDALADFLAAEDGAGEDQFWVLG ILLRSLFDSDGRKPPEIGDTLVERAAGVAKNWSEKFGIKMELYAPDNNEVEMTEAPLVEN ATATEKKEEHVDEEEEEEEEDPEEMVPASEEEADAEEVEKEEEDPEEVEKEGGEAEAKVA NAAKTGEVEKRKVEEDKKASGREVKEGEKGGQAEVQIFLQMVAAFGLKDRYDVDFLRRLL VDNGRRRELARIACVLGFEDSLRDVIEEFIKSGNEIEAIHIAHEAGLLERFPPVPLLKSY IKRITNKTQVALRGGRHSNSVVEEANNSECNAYKSIIRCVETCQLTSAFNLDGIRKKVAR MEKEKADRRKPSGMNRFQNNKRARGASGPQSFPPSKYSRGSNSNYGSSFRNPASHSFPYT DRAGFVGPAPGARPHFAPGSSMGTRRAGVLYGGPGATFGAGHGYGAGAGHQSYHH

Transcript Sequence

Transcript ID	Os01t0181000-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:4272846:4276299:-1 gene:Os01g0181000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Frigida-like domain containing protein. (Os01t0181000-00)
Sequence	ATGGCCGCCACCGGCGATTCCGCCGCCGCCGCCGGCGAGGTCCGGCGCCTCCTCGCCCAC CTCGACTCCCACCAGCAGCTCCTCGCCTCCTGCCACGACGCCTGGTCGCGCGCGCTCGCC CACTTCGCCTCGCTCGACGAGGACCTCGCCGCCCGCTCCGCGTCGCTCGACGACGCCCTA GCCGCCGCGGGCGCCTCCACCTCCGAGTCCCTCGCGGCGCTCGAGGCCCGCGAGGCCGCC GTCCCGGCGCGCCTCGCCGAGGCCGAGGCGGCGCTGTCCGCGGCCGTCGCGGAGGCCGGG TCCGCGGAGCCCCCGCCCGCCGACGTCCGCGGCGCGCTCCGGTGGATGTGCGGCCGCATG GACGCCCCCGCGCTGTGGCGCTTCATGGCGGCGCGGCGGCGGGAGCTCGCCGCCGTCCGG AAGGAGGTCGGCCCCGCCGTCGCCGCGTCGGTCGACCCGCCCCGCCTCGTGCTCGACGCC CTCGCCGACTTCTTGGCCGCGGAGGATGGTGCAGGTGAGGACCAGTTCTGGGTGCTCGGC ATACTGCTGCGCTCGTTGTTTGATTCCGATGGCCGGAAGCCGCCGGAGATAGGAGATACG CTGGTTGAGAGGGCGGCCGGAGTTGCCAAGAATTGGTCAGAGAAATTTGGGATCAAGATG GAATTGTATGCACCGGATAACAATGAGGTGGAGATGACAGAAGCGCCTTTGGTGGAGAAC GCAACAGCGACAGAGAAGAAAGAAGAGCATGTAGATGAGGAAGAAGAGGAGGAAGAGGAG GACCCAGAGGAAATGGTGCCCGCGTCGGAGGAAGAGGCAGATGCAGAGGAGGTAGAGAAG GAAGAAGAGGACCCAGAGGAAGTAGAGAAGGAAGGAGGAGAGGCGGAAGCCAAGGTGGCC AATGCGGCGAAGACAGGGGAAGTAGAGAAGAGGAAAGTCGAGGAAGATAAGAAGGCGTCG GGAAGAGAGGTGAAGGAGGGAGAGAAGGGTGGACAGGCAGAGGTGCAGATATTCCTGCAG ATGGTTGCTGCATTTGGACTAAAAGATAGGTATGATGTAGATTTCTTGAGGCGGCTATTA GTTGATAATGGACGGAGGAGGGAACTTGCCAGAATCGCTTGCGTCCTTGGTTTCGAGGAT AGCCTCAGAGATGTTATTGAGGAATTCATAAAGTCAGGAAATGAGATAGAAGCTATTCAT ATCGCCCATGAGGCTGGTTTGCTTGAGCGATTTCCACCTGTACCGCTTCTTAAGTCTTAT ATAAAGAGAATAACTAACAAGACTCAGGTTGCACTGAGAGGTGGAAGACATTCAAATTCT GTTGTGGAAGAGGCAAACAACTCGGAGTGCAACGCCTACAAGTCCATCATCAGGTGTGTC GAGACATGCCAGCTAACATCAGCATTTAACCTCGATGGCATAAGGAAGAAGGTCGCAAGG ATGGAGAAAGAGAAGGCTGACAGGAGGAAGCCGAGTGGCATGAACAGATTCCAGAACAAC AAGCGAGCTCGGGGAGCATCCGGGCCTCAGTCCTTCCCTCCCTCCAAGTACTCAAGGGGC TCGAACTCGAACTACGGGTCATCTTTTCGGAACCCGGCCTCCCACTCTTTCCCCTACACC GATCGTGCCGGTTTTGTCGGACCGGCACCAGGTGCTCGGCCGCACTTCGCACCGGGAAGC TCCATGGGCACGCGCCGTGCTGGGGTGCTGTACGGTGGACCTGGAGCGACATTTGGAGCC GGCCATGGCTATGGTGCTGGTGCTGGGCATCAATCTTACCATCACTAAAGATGGTTTAGA CTTTGGACTGGATGTTGATGTTACTGAATGCTCACTGTTTTCCTGGGTAATA