Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0180000-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:4179207:4181412:-1 gene:Os01g0180000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pistil-specific extensin-like protein family protein. (Os01t0180000-01)
Sequence	ATGAGGGGTGCGGGGTTTCTGCTGCTCGTTGTGTTCGCCGTTGCCGTCGCCGGTGGGGCG GTGGCGGCGGCGGCGGATTTGGACGGCGGCGATGGTGGTGGTGGTGTGGCGGCGGAGTGG CGGTTTCCGAGCTCGAGGATGCGGGACGCGTACGTGGCGCTGCAGACGTGGAGGCGGGAG GCCATCTTCTCCGACCCCGGCAACCTCACCGCCGACTGGGTGGGCCCCGACGTGTGCAAC TACACCGGCGTGTTCTGCGCGCCGCTGCCGTGGGATCGCCGGGAGGTCGCCGTCGCCGGC GTCGACCTCAACCACGGCGACATCGCCGGGTACCTGCCCCCCGAGCTCGGCCTGCTCGCC GACCTCGCGCTGCTCCACCTCAACTCCAACCGCTTCTGCGGCGTGCTCCCGGCCACCCTC CGCCGCCTCCGCCTCCTACACGAGCTCGACCTCAGCAACAACCGCTTCGTCGGGAGGTTC CCCGAGGTGGTGCTCGACATGCCCGCGCTCCGGTTCCTCGACCTCCGCTTCAACGACTTC GAGGGCGGGGTGCCCCGCCAGCTGTTCGACCGGCCGCTCGACGCCATCTTCCTCAACCAC AACCGCTTCCGCTTCGACCTCCCGGACAACTTCGGCAACTCGCCGGTCTCCGTCATCGTC CTCGCGCACAACAGCTTCGGCGGCTGCCTCCCGGCGAGCCTCGGCAACATGTCCGGGACG CTCAACGAGATCTTGCTCATCAACACGGGCCTCAGCTCCTGCCTGCCGCCGGAGGTCGGG ATGCTGCGAGAGGTGACGGTGTTCGACGTGAGCTTCAACCGGCTCGCCGGCCCGCTGCCG TCGGCGGTGGCCGGGATGAGGAAGGTGGAGCAGCTCGACGTCGCGCACAACCTGCTCACG GGGGCGATACCGCAGGCGGTGTGCGAGCTGCCGCGCCTCAAGAACTTCACCTTCGCGTAC AACTTCTTCACCGGCGAGCCGCCGTCCTGCGCGCACGCCGTGCCGCGCTACGGCGACCGG AGGAACTGCCTGCCCAACCGCCCCGCCCAGCGGACGCTGCGGCAGTGCGCCGCGTTCTTC GCGCGCCCTCCCGTCAACTGCGCCGCGTTCCAGTGCAAGCCGTTCGTCCCGGCCCTGCCG CCACCATCGCCGCCACCACCATCACCGCCGCCGCCTTCGCCACCGCCGCCATCCCCACCG CCACCGTCGACATCACCGCCTCCGCCTTCACCACCACCGCCATCTCCACCGCCACCATCG CCTCCACCGCCTGCACCAATCTTCCACCCACCGCAGCCGCCGCCGCCGCCGCCACCACCC GCGCCACAACCGCATCCGCCATGTCCGGAGCTGCCGCCACCACCACCGCCGCCGCCACCC TGCGGCGGCGCAACACCAGCATTGTCACCACCACCACCACCACCTTACTACCCCGGGCCA TGGCCACCTGTCCATGGAGTACCATATGGCTCACCACCACCTCCCCCTCTGCAACACCAC AGCTCATGGCCACCGATCCACAGCGTACCATATGGATCACCACCTCCTCCCCCGCTGCAT TGA

Peptide Sequence

PEP ID	Os01t0180000-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:4179207:4181412:-1 gene:Os01g0180000 transcript:Os01t0180000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pistil-specific extensin-like protein family protein. (Os01t0180000-01)
Sequence	MRGAGFLLLVVFAVAVAGGAVAAAADLDGGDGGGGVAAEWRFPSSRMRDAYVALQTWRRE AIFSDPGNLTADWVGPDVCNYTGVFCAPLPWDRREVAVAGVDLNHGDIAGYLPPELGLLA DLALLHLNSNRFCGVLPATLRRLRLLHELDLSNNRFVGRFPEVVLDMPALRFLDLRFNDF EGGVPRQLFDRPLDAIFLNHNRFRFDLPDNFGNSPVSVIVLAHNSFGGCLPASLGNMSGT LNEILLINTGLSSCLPPEVGMLREVTVFDVSFNRLAGPLPSAVAGMRKVEQLDVAHNLLT GAIPQAVCELPRLKNFTFAYNFFTGEPPSCAHAVPRYGDRRNCLPNRPAQRTLRQCAAFF ARPPVNCAAFQCKPFVPALPPPSPPPPSPPPPSPPPPSPPPPSTSPPPPSPPPPSPPPPS PPPPAPIFHPPQPPPPPPPPAPQPHPPCPELPPPPPPPPPCGGATPALSPPPPPPYYPGP WPPVHGVPYGSPPPPPLQHHSSWPPIHSVPYGSPPPPPLH

Transcript Sequence

Transcript ID	Os01t0180000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:4179207:4181412:-1 gene:Os01g0180000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pistil-specific extensin-like protein family protein. (Os01t0180000-01)
Sequence	CTCCTCCTCTCCTTTCTCTCTCTAAACCTCTCTCTCCTCTCTCTCTCTCTCTTGAGTTCT TGGTTGATCGCCATTGCCGCGGAGGAGCTAGAGGAGATGAGATGAGGGGTGCGGGGTTTC TGCTGCTCGTTGTGTTCGCCGTTGCCGTCGCCGGTGGGGCGGTGGCGGCGGCGGCGGATT TGGACGGCGGCGATGGTGGTGGTGGTGTGGCGGCGGAGTGGCGGTTTCCGAGCTCGAGGA TGCGGGACGCGTACGTGGCGCTGCAGACGTGGAGGCGGGAGGCCATCTTCTCCGACCCCG GCAACCTCACCGCCGACTGGGTGGGCCCCGACGTGTGCAACTACACCGGCGTGTTCTGCG CGCCGCTGCCGTGGGATCGCCGGGAGGTCGCCGTCGCCGGCGTCGACCTCAACCACGGCG ACATCGCCGGGTACCTGCCCCCCGAGCTCGGCCTGCTCGCCGACCTCGCGCTGCTCCACC TCAACTCCAACCGCTTCTGCGGCGTGCTCCCGGCCACCCTCCGCCGCCTCCGCCTCCTAC ACGAGCTCGACCTCAGCAACAACCGCTTCGTCGGGAGGTTCCCCGAGGTGGTGCTCGACA TGCCCGCGCTCCGGTTCCTCGACCTCCGCTTCAACGACTTCGAGGGCGGGGTGCCCCGCC AGCTGTTCGACCGGCCGCTCGACGCCATCTTCCTCAACCACAACCGCTTCCGCTTCGACC TCCCGGACAACTTCGGCAACTCGCCGGTCTCCGTCATCGTCCTCGCGCACAACAGCTTCG GCGGCTGCCTCCCGGCGAGCCTCGGCAACATGTCCGGGACGCTCAACGAGATCTTGCTCA TCAACACGGGCCTCAGCTCCTGCCTGCCGCCGGAGGTCGGGATGCTGCGAGAGGTGACGG TGTTCGACGTGAGCTTCAACCGGCTCGCCGGCCCGCTGCCGTCGGCGGTGGCCGGGATGA GGAAGGTGGAGCAGCTCGACGTCGCGCACAACCTGCTCACGGGGGCGATACCGCAGGCGG TGTGCGAGCTGCCGCGCCTCAAGAACTTCACCTTCGCGTACAACTTCTTCACCGGCGAGC CGCCGTCCTGCGCGCACGCCGTGCCGCGCTACGGCGACCGGAGGAACTGCCTGCCCAACC GCCCCGCCCAGCGGACGCTGCGGCAGTGCGCCGCGTTCTTCGCGCGCCCTCCCGTCAACT GCGCCGCGTTCCAGTGCAAGCCGTTCGTCCCGGCCCTGCCGCCACCATCGCCGCCACCAC CATCACCGCCGCCGCCTTCGCCACCGCCGCCATCCCCACCGCCACCGTCGACATCACCGC CTCCGCCTTCACCACCACCGCCATCTCCACCGCCACCATCGCCTCCACCGCCTGCACCAA TCTTCCACCCACCGCAGCCGCCGCCGCCGCCGCCACCACCCGCGCCACAACCGCATCCGC CATGTCCGGAGCTGCCGCCACCACCACCGCCGCCGCCACCCTGCGGCGGCGCAACACCAG CATTGTCACCACCACCACCACCACCTTACTACCCCGGGCCATGGCCACCTGTCCATGGAG TACCATATGGCTCACCACCACCTCCCCCTCTGCAACACCACAGCTCATGGCCACCGATCC ACAGCGTACCATATGGATCACCACCTCCTCCCCCGCTGCATTGATAGAATTTCTCCGAAG AATGTTTGGAAACATGCATGTGTTCCGCTCTTGCTCCTCACATCCGGCAAATCGACAGCA GCGGAAGTCGCACACAAGTATACGTGGTCATTATCGTTCTTATTAGCTACTAGTGTTCTT GGTTGGTTGATTGATGACTACCGGCGTGAAGAGCGTAGTAAGGTGCACAAAATTTTGTTT GGTTATGATTTGTCGGCGTCAGCATCGAAACAGTTTGTGTTGCTGTGGTGTTGAAAGGGA TTGGGAAGTGGTGGGGGTGTGGGGATTTGGAGGATTTGGGAACATATGATTGATGGCTAA TTGGGTTGTGAATAATAAGGAAAAGTTTGAGAGGGACAGGAGGGTTTGGCAGAGGATTGT AGGTGCAGGGATATATGTGGTTGTATAGATGAGAATCATGAGTTCAGTTCAGTTAAATTC AGTAGTAGTAAGACATAAGTTTTAGAACAAAAGGATTCTGTGTCATTTCTTCCTGCTGTA TCACAATTACTTCTGGCTATTCAATTCTTATTATTATTTAGTATGG