Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0179800-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:4167514:4173240:-1 gene:Os01g0179800 gene_biotype:protein_coding transcript_biotype:protein_coding description:TMS membrane protein/tumour differentially expressed protein family protein. (Os01t0179800-01)
Sequence	ATGACGCTGGGCAGCGGCGGCATGGCGGCGGAGGAGGGCGGCGGCAATGGCGAGGCGGCG GCGAGGGGGGAGAGGTGCGTGGTGGTGGCGGTGGAGGAGACGTGCTGCGCGTGCGCGCAG CTCGTGGTCGGGCCGCCGAACCCGATGATGGCGAGGTACGTGTACGCCTTCGTGTTCCTG GCGACCAACCTGCTCGCCTGGACGCTCCGCGACTTCGGCCACCCCGTCCTCGCCGAGCTC CGGCGACTCCGCGGCAGCTGCCAGGGCGCCGGCTACTGCCTCGGCGCCGAGGGCGTCCTC CGCGTCAGCCTCGGCTGCTTCCTGTTCTTCTTCGTGATGTTCTTGTCGACGGTGAGGACG AGGAAGACGCACGATCGCCGGAATTCATGGCACTCCGAGTGGTGGCCGGCGAAGATCGTG CTGTGGATGGGCTTCACCGTCGTCCCCTTCTTCCTCCCCTCGCCTCTCATCCAGCTCTAC GGGAAGATCGCGCATTTCGGAGCAGGGGCGTTTCTGGTGATCCAGCTCGTCAGTGTCACC CGGTTCATCACCTGGCTGAACGACTGCTGCCGGTCAGAGACCAACCTGAAGAGATGCCAT ATGCAGGTGCAGGTGGTGTCGATCGCGGCGTACGTGGGCTCCATCCTGGGCGTGGTGCTC ATGTACGTGTGGTACGCGCCGCGGCCGTCCTGCAAGCTCAACATCCTCTTCATCACCGTC ACCCTCGTCCTCGTCCAGATCATGACCGGCGTCTCGCTCAGCTCCAAGGTGAAGGCTGGC TACCTGGCGCCTGGGCTGATGGGGGTCTACATCGTGTTCCTCTGCTGGACAGCGATCAGG AGTGAGCCTCACACAGAGATTTGCAACAAGAAAGCCGAGGTTGCAACGAGTGCAGATTGG GTTAACATCGCGAGCTTCGTGATCGCGGTGATCGTCATCGTCACGGCGACATTCGCTACG GGGATCGATTCCAAGTGCCTCCAGTTCAAGAAGGCCGAGAGCGAGCAGCCCGAGGACGAC GACATCCCGTACGGGTTCGGCTTCTTCCACTTCGTGTTCGCCATGGGCGCCATGTACTTC GCTATGCTCTTCGTCGGCTGGAACGCCAATCAAACCATGGAGAAGTGGACGATCGATGTC GGGTGGGCGAGCACCTGGGTCCGGGTTGTCAACGAATGGCTCGCGGCGATCGTGTATATA TGGATGGTGATTGCTCCAATTGTCTGGAAGGGAGGGCAGGTCGGCTCATCGCCAGAGGGC ACATGA

Peptide Sequence

PEP ID	Os01t0179800-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:4167514:4173240:-1 gene:Os01g0179800 transcript:Os01t0179800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:TMS membrane protein/tumour differentially expressed protein family protein. (Os01t0179800-01)
Sequence	MTLGSGGMAAEEGGGNGEAAARGERCVVVAVEETCCACAQLVVGPPNPMMARYVYAFVFL ATNLLAWTLRDFGHPVLAELRRLRGSCQGAGYCLGAEGVLRVSLGCFLFFFVMFLSTVRT RKTHDRRNSWHSEWWPAKIVLWMGFTVVPFFLPSPLIQLYGKIAHFGAGAFLVIQLVSVT RFITWLNDCCRSETNLKRCHMQVQVVSIAAYVGSILGVVLMYVWYAPRPSCKLNILFITV TLVLVQIMTGVSLSSKVKAGYLAPGLMGVYIVFLCWTAIRSEPHTEICNKKAEVATSADW VNIASFVIAVIVIVTATFATGIDSKCLQFKKAESEQPEDDDIPYGFGFFHFVFAMGAMYF AMLFVGWNANQTMEKWTIDVGWASTWVRVVNEWLAAIVYIWMVIAPIVWKGGQVGSSPEG T

Transcript Sequence

Transcript ID	Os01t0179800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:4167514:4173240:-1 gene:Os01g0179800 gene_biotype:protein_coding transcript_biotype:protein_coding description:TMS membrane protein/tumour differentially expressed protein family protein. (Os01t0179800-01)
Sequence	GCCGCTGAAGCTACCTCCTGCTCTTCTTCCTCTTCGTCTTCGGCGTAGCTCCATCCCTGC TGTTGCATGTAGGATTCGATCGATTCGTGGTGGAGGAGTTGAGCTTGTCAGGTGTTCGTT CTTGGGGATCGATGACGCTGGGCAGCGGCGGCATGGCGGCGGAGGAGGGCGGCGGCAATG GCGAGGCGGCGGCGAGGGGGGAGAGGTGCGTGGTGGTGGCGGTGGAGGAGACGTGCTGCG CGTGCGCGCAGCTCGTGGTCGGGCCGCCGAACCCGATGATGGCGAGGTACGTGTACGCCT TCGTGTTCCTGGCGACCAACCTGCTCGCCTGGACGCTCCGCGACTTCGGCCACCCCGTCC TCGCCGAGCTCCGGCGACTCCGCGGCAGCTGCCAGGGCGCCGGCTACTGCCTCGGCGCCG AGGGCGTCCTCCGCGTCAGCCTCGGCTGCTTCCTGTTCTTCTTCGTGATGTTCTTGTCGA CGGTGAGGACGAGGAAGACGCACGATCGCCGGAATTCATGGCACTCCGAGTGGTGGCCGG CGAAGATCGTGCTGTGGATGGGCTTCACCGTCGTCCCCTTCTTCCTCCCCTCGCCTCTCA TCCAGCTCTACGGGAAGATCGCGCATTTCGGAGCAGGGGCGTTTCTGGTGATCCAGCTCG TCAGTGTCACCCGGTTCATCACCTGGCTGAACGACTGCTGCCGGTCAGAGACCAACCTGA AGAGATGCCATATGCAGGTGCAGGTGGTGTCGATCGCGGCGTACGTGGGCTCCATCCTGG GCGTGGTGCTCATGTACGTGTGGTACGCGCCGCGGCCGTCCTGCAAGCTCAACATCCTCT TCATCACCGTCACCCTCGTCCTCGTCCAGATCATGACCGGCGTCTCGCTCAGCTCCAAGG TGAAGGCTGGCTACCTGGCGCCTGGGCTGATGGGGGTCTACATCGTGTTCCTCTGCTGGA CAGCGATCAGGAGTGAGCCTCACACAGAGATTTGCAACAAGAAAGCCGAGGTTGCAACGA GTGCAGATTGGGTTAACATCGCGAGCTTCGTGATCGCGGTGATCGTCATCGTCACGGCGA CATTCGCTACGGGGATCGATTCCAAGTGCCTCCAGTTCAAGAAGGCCGAGAGCGAGCAGC CCGAGGACGACGACATCCCGTACGGGTTCGGCTTCTTCCACTTCGTGTTCGCCATGGGCG CCATGTACTTCGCTATGCTCTTCGTCGGCTGGAACGCCAATCAAACCATGGAGAAGTGGA CGATCGATGTCGGGTGGGCGAGCACCTGGGTCCGGGTTGTCAACGAATGGCTCGCGGCGA TCGTGTATATATGGATGGTGATTGCTCCAATTGTCTGGAAGGGAGGGCAGGTCGGCTCAT CGCCAGAGGGCACATGACACAAGGAGAACAAATCAGAATTCAGAAATGGAGCTTCGTCAG ATGATGCAGCGATAAATACTTGGTCAGCGACAAACACGTACGTAGCTGCAGGCTGCATGA TCAGGGAGATGTACAGGATGAGAAGAACAGTTTTGCTTTCGTTGCAGCTGCTGCAGAGAG GCATATGCAATTGGCATCCATTGCCCATACGAGTGTAGCTAGCTAGCTAAGCTAGATATT TGTATGTTCAGTTTCCTCTCCTGTTACTGGAGAGGGCAATGCATCGAATCAGCAAAGCAT ATTGTCAAATGACAAACTGCTGCTGAACATGCAAAAGGGGCAGCAACCCTTGGAATATAC GCAGACTTCC