Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0179200-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:4118041:4122224:1 gene:Os01g0179200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Syntaxin, N-terminal domain containing protein. (Os01t0179200-01)
Sequence	ATGAACCCGGGGCGCCCGGCGCCGGCGTCGTTCCGCGACCGCACCAACGAGTTCCGCGCC GCCGTCGAGAGCGCCGCGCGCTACGCCTCCTCCTCCGCGGCGGCGGCGCCCAGCAGCAGC AGCGGCGGCGGCGTTGGCGGCCCGCTCGACGTGTCGCGGGGGGCGGCCTCGGCGCACTCG GAGTTCAACCGCCGCGCCTCCAAGATCGGGCTCGGGATCCACCAGACCTCGCAGAAGCTC GCCCGCCTCGCCAAACTGGCAAAGAGGACATCTGTTTTTGATGACCCTACGGTAGAGATA CAAGAGCTGACTGCAGTTATCAAGAAAGATATCACTGCTTTGAATTCTGCCGTTGTAGAC CTACAGGTTCTCTGCAATTCACAAAATGAGAGCGGCAACCTTTCCAAGGATACAACAAAT CATTCCACTACAGTTGTGGACAATCTAAAAAATCGCCTGATGAGCGCAACAAAAGAATTT AAGGAAGTTCTTACCATGCGGACAGAGAACTTGAAAGTTCATGAGAATAGAAGGCAAATG TTCTCATCATCAGCTGCGAACAATGCATCAAATCCATTTGTTCGTCAACGTCCCCTTGTT ACCAGGGATGGTCCTGAATCCTCTGTACCCCCGGCACCATGGGCCAGTGATTCTGCCACT ACTCCATTGTTTCAGAGGAAGAAGACTAATGGAGATCATGGAGCATCATCATCATCTTCT CAGCCATTCATGCAGCAGCAGTTAGTACAGCAGGACAGTTACATGCAGAGTAGAGCGGAG GCTCTCCAAAATGTTGAATCAACCATCCATGAGCTAAGCAACATTTTTACACAACTGGCA ACTATGGTTTCTCAGCAGGGAGAGCTAGCAATCAGAATTGATGAGAACATGGATGACACA CTAGCCAATGTTGAGGGAGCTCAGGGCCAGCTACTGAAGTATCTCAACAGCATTTCATCG AACCGGTGGCTGATGATGAAGATATTCTTTGTGCTGATGGTTTTCCTCATGATCTTTATA TTCTTCGTTGCATGA

Peptide Sequence

PEP ID	Os01t0179200-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:4118041:4122224:1 gene:Os01g0179200 transcript:Os01t0179200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Syntaxin, N-terminal domain containing protein. (Os01t0179200-01)
Sequence	MNPGRPAPASFRDRTNEFRAAVESAARYASSSAAAAPSSSSGGGVGGPLDVSRGAASAHS EFNRRASKIGLGIHQTSQKLARLAKLAKRTSVFDDPTVEIQELTAVIKKDITALNSAVVD LQVLCNSQNESGNLSKDTTNHSTTVVDNLKNRLMSATKEFKEVLTMRTENLKVHENRRQM FSSSAANNASNPFVRQRPLVTRDGPESSVPPAPWASDSATTPLFQRKKTNGDHGASSSSS QPFMQQQLVQQDSYMQSRAEALQNVESTIHELSNIFTQLATMVSQQGELAIRIDENMDDT LANVEGAQGQLLKYLNSISSNRWLMMKIFFVLMVFLMIFIFFVA

Transcript Sequence

Transcript ID	Os01t0179200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:4118041:4122224:1 gene:Os01g0179200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Syntaxin, N-terminal domain containing protein. (Os01t0179200-01)
Sequence	TTTTACGCCAATTCTTTTCCCTCGCCGATCTCCCCCAATTTCCAGCTCGATCCCCATCCC CTCTCCTCCCTCCTTCTTCCTCCGCCTCCCACCCTCCCACCGCGACCGCGTCGACCCGCC ACCCACCCAACCGCGCCGAGATCCAGATCCAGATCCGCCGCCATGAACCCGGGGCGCCCG GCGCCGGCGTCGTTCCGCGACCGCACCAACGAGTTCCGCGCCGCCGTCGAGAGCGCCGCG CGCTACGCCTCCTCCTCCGCGGCGGCGGCGCCCAGCAGCAGCAGCGGCGGCGGCGTTGGC GGCCCGCTCGACGTGTCGCGGGGGGCGGCCTCGGCGCACTCGGAGTTCAACCGCCGCGCC TCCAAGATCGGGCTCGGGATCCACCAGACCTCGCAGAAGCTCGCCCGCCTCGCCAAACTG GCAAAGAGGACATCTGTTTTTGATGACCCTACGGTAGAGATACAAGAGCTGACTGCAGTT ATCAAGAAAGATATCACTGCTTTGAATTCTGCCGTTGTAGACCTACAGGTTCTCTGCAAT TCACAAAATGAGAGCGGCAACCTTTCCAAGGATACAACAAATCATTCCACTACAGTTGTG GACAATCTAAAAAATCGCCTGATGAGCGCAACAAAAGAATTTAAGGAAGTTCTTACCATG CGGACAGAGAACTTGAAAGTTCATGAGAATAGAAGGCAAATGTTCTCATCATCAGCTGCG AACAATGCATCAAATCCATTTGTTCGTCAACGTCCCCTTGTTACCAGGGATGGTCCTGAA TCCTCTGTACCCCCGGCACCATGGGCCAGTGATTCTGCCACTACTCCATTGTTTCAGAGG AAGAAGACTAATGGAGATCATGGAGCATCATCATCATCTTCTCAGCCATTCATGCAGCAG CAGTTAGTACAGCAGGACAGTTACATGCAGAGTAGAGCGGAGGCTCTCCAAAATGTTGAA TCAACCATCCATGAGCTAAGCAACATTTTTACACAACTGGCAACTATGGTTTCTCAGCAG GGAGAGCTAGCAATCAGAATTGATGAGAACATGGATGACACACTAGCCAATGTTGAGGGA GCTCAGGGCCAGCTACTGAAGTATCTCAACAGCATTTCATCGAACCGGTGGCTGATGATG AAGATATTCTTTGTGCTGATGGTTTTCCTCATGATCTTTATATTCTTCGTTGCATGATTT CCACTTGCAATGTCACCATGAATGTTCTGCATAGTTTGTCTGCTATGCGTAGTATATTCT TTTGATTTTTACCAAACTACAACATGTACACAATTTTCACCCGGGATGATAAGCAGCCGT CTAGCCTTTTGTGGTCATGT