Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0178500-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:4073916:4076438:-1 gene:Os01g0178500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:IAA1 description:Similar to Auxin-responsive protein (Aux/IAA) (Fragment). (Os01t0178500-02)
Sequence	ATGTCGGTGGAGACGGAGCGGAGCTCCACGGAGTCGTCCGCCGCGTCGGGGCTCGACTTC GAGGACACCGCCCTCACCCTCCGCCTCCCGGGCTCCCTCGCCGCCGCCGCCGCACCTGAC CCCGACCGCAAGCGCTCCTCCCCCTCCTCCTCCGACGCCGCCGACGCCGCAGACAACTCC TCCCCCCTCGCCGCCGCCGCCGATGCTCCCCCTGCTCCCAAGGCGAGGGTGGTGGGGTGG CCGCCGGTGAGGTCGTTCAGGAAGAACGCGCTGGCGGCCAAGTTCGTGAAGGTGGCCGTG GACGGCGCGCCGTACCTGCGCAAGGTGGACCTCGAGGCCTACTCCGGCTACGACCAGCTC CTCCGCGCGCTCCAGGACAAGTTCTTCTCCCACTTCACCATCCGGAAGTTCGCCGACGAC GAGAGGAAGCTGGTGGACGCGGTGAACGGGACGGAGTACGTGCCGACGTACGAGGACAAG GACGGCGACTGGATGCTCGTCGGCGACGTCCCCTGGAAGATGTTTGTGGAAACTTGCCAG CGCCTTCGTCTCATGAAAAGCTCAGAGGCTGTCAACTTAGCACCAAGAGCCGCTCAATGA

Peptide Sequence

PEP ID	Os01t0178500-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:4073916:4076438:-1 gene:Os01g0178500 transcript:Os01t0178500-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:IAA1 description:Similar to Auxin-responsive protein (Aux/IAA) (Fragment). (Os01t0178500-02)
Sequence	MSVETERSSTESSAASGLDFEDTALTLRLPGSLAAAAAPDPDRKRSSPSSSDAADAADNS SPLAAAADAPPAPKARVVGWPPVRSFRKNALAAKFVKVAVDGAPYLRKVDLEAYSGYDQL LRALQDKFFSHFTIRKFADDERKLVDAVNGTEYVPTYEDKDGDWMLVGDVPWKMFVETCQ RLRLMKSSEAVNLAPRAAQ

Transcript Sequence

Transcript ID	Os01t0178500-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:4073916:4076438:-1 gene:Os01g0178500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:IAA1 description:Similar to Auxin-responsive protein (Aux/IAA) (Fragment). (Os01t0178500-02)
Sequence	ATTTTGCTTTGCTTTCTTTGCTTTCCTCTCCTCTCTCGCCGCCCACCTCGCCGTCGCCGC CGCCGCGAGGGCCAACGCCGGCGAAGTCCGCGAGCCGAAGCATCACACAGCTGCGCCAGC GATGTCGGTGGAGACGGAGCGGAGCTCCACGGAGTCGTCCGCCGCGTCGGGGCTCGACTT CGAGGACACCGCCCTCACCCTCCGCCTCCCGGGCTCCCTCGCCGCCGCCGCCGCACCTGA CCCCGACCGCAAGCGCTCCTCCCCCTCCTCCTCCGACGCCGCCGACGCCGCAGACAACTC CTCCCCCCTCGCCGCCGCCGCCGATGCTCCCCCTGCTCCCAAGGCGAGGGTGGTGGGGTG GCCGCCGGTGAGGTCGTTCAGGAAGAACGCGCTGGCGGCCAAGTTCGTGAAGGTGGCCGT GGACGGCGCGCCGTACCTGCGCAAGGTGGACCTCGAGGCCTACTCCGGCTACGACCAGCT CCTCCGCGCGCTCCAGGACAAGTTCTTCTCCCACTTCACCATCCGGAAGTTCGCCGACGA CGAGAGGAAGCTGGTGGACGCGGTGAACGGGACGGAGTACGTGCCGACGTACGAGGACAA GGACGGCGACTGGATGCTCGTCGGCGACGTCCCCTGGAAGATGTTTGTGGAAACTTGCCA GCGCCTTCGTCTCATGAAAAGCTCAGAGGCTGTCAACTTAGCACCAAGAGCCGCTCAATG AGGCATTCCCGGTGCCCATGACCGTGTGGTTGGATTGAAAGAAAGTGGAAGCTTTGCCCC GCCGATGTTCGCCCACGTGTGATATGAACATGTACAGTTGTCTCCTACTACTTTTGGTTC CTTGATGATGCTGAGTTGAGAAAAAGGTTGTAGTTTCGTTACTCGTCTGTAGTCTCTCCA TATATAGATAATGAAGCACTGAAGCTTGAAATATACACCTACAGTTTGTCTCTTTATGAA TAAGACCATATACGCAAAAAAACCGATGTTCTTTGCTGCGGCTCGCGTGTCGTCAGGCTA TATGCAGTTTTTTGTCGCACCATAGGCGATGGACATCTCTGGCCTTATACTTTCGTAAAA ATCTTATCATGTTAAGCGATGGTCTTGCTTTGGAGTTC