Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0178000-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:4051898:4054218:-1 gene:Os01g0178000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pyridoxal phosphate-dependent transferase, major region, subdomain 1 domain containing protein. (Os01t0178000-01);Similar to Transaminase/ transferase, transferring nitrogenous groups. (Os01t0178000-02)
Sequence	ACTTGCTTGCAAAATTGGTGGGTGGTCTCCAGGTACTTTATGTATGATGGAATGGAGCAC TATTGCTTAGAGGGTAATCACATTGTCAACCTCTTCTCATTCTCGAAGGCTTACGGAATG ATGGGCTGGCGTGTAGGATACATTGCCCACCCAAACGAAGCTGACGGTCTTCATGCACAG CTGCTCAAAGTGCAAGATAACATACCTATCTGTGCTTCCATCATCGGGCAGCGCCTGGCG CTCTACGCATTAGAGGCTGGTCCAGAATGGATCAGAGAAAGGGTGAGAGATCTAGTGAAA AACCGTGAATTGCTCATGGAAGCGATGTCTCCGCTTGGCAAGGACTCTGTCAAGGGTGGT GAGGGTGCCATTTACCTCTGGGCAAAACTACCCGAGAAATGCTCAGATGATTTTGAAGTT GTCAGATGGCTTGCAAACAAGCATGGTGTGGCTGTGATCCCCGGGAGCGCCAGTGGAGGT CCCGGATATATCCGGGTTTCTTTCGGAGGGTTGAAAGAATCGGATACAAGGCTTGCTGCT GAGAGGTTAAGGCGCGGCTTGCAAGAACTTGTGACTGAGGGAATGGTACAGTGA

Peptide Sequence

PEP ID	Os01t0178000-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:4051898:4054218:-1 gene:Os01g0178000 transcript:Os01t0178000-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pyridoxal phosphate-dependent transferase, major region, subdomain 1 domain containing protein. (Os01t0178000-01);Similar to Transaminase/ transferase, transferring nitrogenous groups. (Os01t0178000-02)
Sequence	TCLQNWWVVSRYFMYDGMEHYCLEGNHIVNLFSFSKAYGMMGWRVGYIAHPNEADGLHAQ LLKVQDNIPICASIIGQRLALYALEAGPEWIRERVRDLVKNRELLMEAMSPLGKDSVKGG EGAIYLWAKLPEKCSDDFEVVRWLANKHGVAVIPGSASGGPGYIRVSFGGLKESDTRLAA ERLRRGLQELVTEGMVQ

Transcript Sequence

Transcript ID	Os01t0178000-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:4051898:4054218:-1 gene:Os01g0178000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pyridoxal phosphate-dependent transferase, major region, subdomain 1 domain containing protein. (Os01t0178000-01);Similar to Transaminase/ transferase, transferring nitrogenous groups. (Os01t0178000-02)
Sequence	GGCTTGTAGTTGACAATACCTATGAGTAAGTTAGTACTCAATTACTGATTATTGCTCAAC TGCAACGTCATTTTGGTGCTTCTTTTCTTTCTGTTGTTGATAAAGCTCCTCAGTCCCTTC AGAAATTGATATTACTTAAAGCAATTGTAAAGACGAGGCACTACGAAAGAATGAACTACA CATGGACATGATCACCTTAAGTAGTAGTTTAAAAGGACAGTTCACCATAAGCAGTTGAGC AACTGTGCTTGACTTCTTGAAGTTGAGTCCTGGATGACGCCCTCTCTGATAGATTAAATA AATAGGACTTCAAGAATGTGGTATCTCTTTCAAAAAGTATCTGCAAACCACCCGCCAGTA AGGGTTTGTCAAATGTAGTTATCTTCACATGCTCAGCTTATTCAAGTAGGGAAAATCTTC CATTTCTTCTCAACACTAGAATTGGACACATGGAACAACTCGTTTTCTTTTGAAGGTCCC ATTTCAGTTCCTCAATTTCAGTGATGCCCAAAATAAACCCTCCAGTCACTTACAGGCAGA GTGGAAGACTCACTGACAAGAGCCTAAATTGAATCACGGATTAGACTCTTCCCTCAAGAA AAGTCTTACTTTCAGCAGCCTAGCATCCGCTGTGCGGCATTGGGAAGAATATATCTGTTG TTAGTTCTGATCAAATCAGAAATATTTGATCTCTTGCTAATCTACCCTTGCTCTATATTT CAGATCATGTTTACCTTTTCTTGTCTGGCTCTGTAGTTGAGTAATGGAAATTGATATTAG TTTTTGCCATTTCCTTACCCTGATGTTGATGTTAAAAGGATGCTATGGGTCCTTTTCGAA TATAAGCTTGATGGACTTCCCAATGTTAATACACCACCGAATTTGACATGTGTAAATCTT GTATATGATAAAAGTATAATTTGGAAACTTTCAATTATCATCACATTGATTTTTAGATAA TCTGTATTCAAAATGTTTGCACGAATACTGAAATTCAAGAAAACATTTTCTCGGAAGAAT TCTTTTCCATAAAAGGTGACTGACCTTTTACTTTCTGTAAAATAATTCTACATATGGGGC TATTTTGGATTCTGTATAACTTTGATGTTGAACTTGCTTGCAAAATTGGTGGGTGGTCTC CAGGTACTTTATGTATGATGGAATGGAGCACTATTGCTTAGAGGGTAATCACATTGTCAA CCTCTTCTCATTCTCGAAGGCTTACGGAATGATGGGCTGGCGTGTAGGATACATTGCCCA CCCAAACGAAGCTGACGGTCTTCATGCACAGCTGCTCAAAGTGCAAGATAACATACCTAT CTGTGCTTCCATCATCGGGCAGCGCCTGGCGCTCTACGCATTAGAGGCTGGTCCAGAATG GATCAGAGAAAGGGTGAGAGATCTAGTGAAAAACCGTGAATTGCTCATGGAAGCGATGTC TCCGCTTGGCAAGGACTCTGTCAAGGGTGGTGAGGGTGCCATTTACCTCTGGGCAAAACT ACCCGAGAAATGCTCAGATGATTTTGAAGTTGTCAGATGGCTTGCAAACAAGCATGGTGT GGCTGTGATCCCCGGGAGCGCCAGTGGAGGTCCCGGATATATCCGGGTTTCTTTCGGAGG GTTGAAAGAATCGGATACAAGGCTTGCTGCTGAGAGGTTAAGGCGCGGCTTGCAAGAACT TGTGACTGAGGGAATGGTACAGTGACAGCCCAATGGATGCAAGAAATACATGACATACAA ATCACAAAAGTGAAAATTTTCAGTTACATAATAATTCTGGGATTAGTTCAAGAGAAGAAA AGAGCCAAAATTTCAAGATTACAACATGGTTGTTAGAAAATGCTGAAGCTTTTATTTCAG AGAACTTTTGTCACATTGGATTTCCTAGTGGAAATTTGATTTGGTGGGTTGAGTAGAGGG AAAAAAAAAGACTCATCCACCCTGTGGAATACCATTGTCATTAAAGGGGTATTCATGTTT AGTACTTACTGTTGCTTGATAACCTCTTTCCCTACAATCAGGACAGCAGCTGTACACAAG TAAGATATAATAAGATATAATAGC