Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0177200-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:3986647:3995398:1 gene:Os01g0177200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Ubiquitin-specific protease 14. (Os01t0177200-01)
Sequence	ATGGATCTCCTCCGCTCGCACCTCCACAAGGTCCGCATCCCGGAGCCCGGCAGCCGCATC CACAAGGACGAGTGCTGCGTCTCCTTCGACACCCCGAGGTCGGAGGGTGGGCTGTACGTC GACATGACCTCGTTCCTGGGGTTCGGGAGGGAGCACGTGGCGTGGAACTACGAGAAGAGT GGGAACCCCGTGTACCTCCACATCGTGCAGCGCCGGAAGCCGGAGCCCGACGACGAGGCG GATCGCCCGCTGAAGAAGCCCACGCTACTCGCCATCGGAGTGGAGGGAGGTTTCACTGAT CAAGAACCCGAATACGATGAGGCTTTTGAAATTGTTATCTTGCCTGAATTTACTTCTCTC CCTTTTCCATCAATTGACTTGCCAGAGAAGGTTAGGATTGCAGTTGACAAAGTTATACTT GCCGAAAGTGCTGATCGAAAACAACAATTGGCTTCTTGGGTTGCTGACAAGAAAAAAGTC AGTGCACATGCTATGGATCTGAAGCAGCTAGACAATGGTGTCATTGTGCCACCTACAGGA TGGAAGTGCAGCAAGTGTGATAAAACTGAGAATCTCTGGTTAAATTTAACTGATGGCATG ATCCTATGTGGGAGGCGGCTTTGGGATGGAAGTGGGGGGAATAATCATGCTATTGAACAC TACGAACAGACTAAATATCCTCTTGCGGTAAAGCTTGGAACAATTACTGCTGATTTAGAA GCAGCAGACGTTTTCTCATACCCAGAAGATGATAGCGTTGAAGATCCACTATTAGCGCAG CATTTGTCACATTTTGGTATTGATTTTTCTTCACTCCAAAAGACCGAGATGACTACTGCT GAAAGAGAGCTTGATCACAACACAAATTATGACTGGAATAGAATACAAGAAAGTGGCAAA GATGCCGAACTTTTATACGGCCCTGGTTATACTGGCCTTGTAAATCTTGGAAATAGTTGC TATATGGCCTCAGTAATGCAAGTTATGTTTTCAACTCATCCTTTTATATCACGCTACTTT GAGAAGCAGAGCTTGAAAGCTGCATTTGCAATTGCCCCAGCTGATCCAACATTGGACTTG AACATGCAAATGACAAAGTTGGCTCATGGAATGCTCTCTGGCAAATACTCTGTGCCAAAT CAGGAGGGACAAGAAGGAATACACCCTCGTATGTTTAAGACAGTTATTGCTGCAAAGCAT CCCGAATTTTCCAGTATGAGGCAACAGGATGCGCTTGATTTCTTCCTTCATCTTATTGAC CAAGTTGATCAGGCAAACACCGGAAACCATGAGCTGAATCCTTTTACAGGGTTCAAATTC TTCATTGAGGAGCGTCTTCAATGCCCTTCTGGAAAAGTCTCCTATAACAAACGTTCTGAC TACATTCTTTCTTTGAACATACCGTTACATGAAGCTACTAACAAAGAGCAGCTAGAAGCA TTTCATGAGAAGAAAGCTGCAATGGATTTGGATGGAAAGGAAGTGTCTAATGAGGAAATT GTGAGGCCTAGAGTCCCACTGGAGGCATGCTTAGCAAGTTTTTCAGGCGCGGAGGAAGTG CCTGAATTTTACAGCACTGCATTGAATTCAAAGACAACAGCAATTAAGACTGCTGGCTTT AAAACATTTCCTGATTACCTGGTGTTGCAGATGCGCAAGTTTGTAATGGAAGCAGGATGG GTGCCAAAGAAACTAGATGTATACGTAGATGTGCCAGATATAATTGATATCTCGCACATG CGCAGCAAAGGCATACAGCCTGGTGAAGAGCTACTACCTGAAGGAGCTTCTGGTGATAAC AAAGCTGAACCTGTTCATCCTGTTGCCAGTGAGGACATTGTATCTCAGCTGGCAAGCATG GGGTTCAATTATCTTCATTGCCAGAAAGCTGCTATTAGTACATCAAACACAGGAGTTGAG GAGGCGATGAATTGGCTTCTCTCACACATGGATGATCCAGATATCAACGATCCAATATCT AAAGATTCACAGGCTGCTGAACAAACTGTTGATGAAACTAGCGTTCAAACTCTTGTTTCC TTCGGATTTCAAGAAGATGTTGCTCGAAAGGCCTTGGCAGCTTCTGGTGGAAATATCGAG AGAGCAACAGACTGGATTTTTAGCCACCCTGAGGCTTTTAGCTCAGTACCTACTGATTCT TCAACAAGCAATATGGAAGATGATGATGCACACATACCAGATGGAAGTGGCAGATACAAA TTGATGGCGTTTGTGAGCCATATGGGCACCTCTACCCATTGTGGGCACTACGTTGCCCAT GTCCTCAAAGACGGGAGGTGGGTAATATTCAATGATAGTAAGGTTGCTGCCTCTGTCGAC TTGCCCAAGGATATGGGATACCTGTATTTCTTTCAAAGGATATAA

Peptide Sequence

PEP ID	Os01t0177200-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:3986647:3995398:1 gene:Os01g0177200 transcript:Os01t0177200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Ubiquitin-specific protease 14. (Os01t0177200-01)
Sequence	MDLLRSHLHKVRIPEPGSRIHKDECCVSFDTPRSEGGLYVDMTSFLGFGREHVAWNYEKS GNPVYLHIVQRRKPEPDDEADRPLKKPTLLAIGVEGGFTDQEPEYDEAFEIVILPEFTSL PFPSIDLPEKVRIAVDKVILAESADRKQQLASWVADKKKVSAHAMDLKQLDNGVIVPPTG WKCSKCDKTENLWLNLTDGMILCGRRLWDGSGGNNHAIEHYEQTKYPLAVKLGTITADLE AADVFSYPEDDSVEDPLLAQHLSHFGIDFSSLQKTEMTTAERELDHNTNYDWNRIQESGK DAELLYGPGYTGLVNLGNSCYMASVMQVMFSTHPFISRYFEKQSLKAAFAIAPADPTLDL NMQMTKLAHGMLSGKYSVPNQEGQEGIHPRMFKTVIAAKHPEFSSMRQQDALDFFLHLID QVDQANTGNHELNPFTGFKFFIEERLQCPSGKVSYNKRSDYILSLNIPLHEATNKEQLEA FHEKKAAMDLDGKEVSNEEIVRPRVPLEACLASFSGAEEVPEFYSTALNSKTTAIKTAGF KTFPDYLVLQMRKFVMEAGWVPKKLDVYVDVPDIIDISHMRSKGIQPGEELLPEGASGDN KAEPVHPVASEDIVSQLASMGFNYLHCQKAAISTSNTGVEEAMNWLLSHMDDPDINDPIS KDSQAAEQTVDETSVQTLVSFGFQEDVARKALAASGGNIERATDWIFSHPEAFSSVPTDS STSNMEDDDAHIPDGSGRYKLMAFVSHMGTSTHCGHYVAHVLKDGRWVIFNDSKVAASVD LPKDMGYLYFFQRI

Transcript Sequence

Transcript ID	Os01t0177200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:3986647:3995398:1 gene:Os01g0177200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Ubiquitin-specific protease 14. (Os01t0177200-01)
Sequence	AATCTAATCACTCCTCCCCTCTTCCACCCTCCCCCCACCTCGTCGCCTCGCCGTCTCCAC CCCCAAAACCCTAGCCGCCGCCGCGCTCCTCCTCCTCCGCCGCCGCCCGGCGCCGCCCGC GGCCATGGATCTCCTCCGCTCGCACCTCCACAAGGTCCGCATCCCGGAGCCCGGCAGCCG CATCCACAAGGACGAGTGCTGCGTCTCCTTCGACACCCCGAGGTCGGAGGGTGGGCTGTA CGTCGACATGACCTCGTTCCTGGGGTTCGGGAGGGAGCACGTGGCGTGGAACTACGAGAA GAGTGGGAACCCCGTGTACCTCCACATCGTGCAGCGCCGGAAGCCGGAGCCCGACGACGA GGCGGATCGCCCGCTGAAGAAGCCCACGCTACTCGCCATCGGAGTGGAGGGAGGTTTCAC TGATCAAGAACCCGAATACGATGAGGCTTTTGAAATTGTTATCTTGCCTGAATTTACTTC TCTCCCTTTTCCATCAATTGACTTGCCAGAGAAGGTTAGGATTGCAGTTGACAAAGTTAT ACTTGCCGAAAGTGCTGATCGAAAACAACAATTGGCTTCTTGGGTTGCTGACAAGAAAAA AGTCAGTGCACATGCTATGGATCTGAAGCAGCTAGACAATGGTGTCATTGTGCCACCTAC AGGATGGAAGTGCAGCAAGTGTGATAAAACTGAGAATCTCTGGTTAAATTTAACTGATGG CATGATCCTATGTGGGAGGCGGCTTTGGGATGGAAGTGGGGGGAATAATCATGCTATTGA ACACTACGAACAGACTAAATATCCTCTTGCGGTAAAGCTTGGAACAATTACTGCTGATTT AGAAGCAGCAGACGTTTTCTCATACCCAGAAGATGATAGCGTTGAAGATCCACTATTAGC GCAGCATTTGTCACATTTTGGTATTGATTTTTCTTCACTCCAAAAGACCGAGATGACTAC TGCTGAAAGAGAGCTTGATCACAACACAAATTATGACTGGAATAGAATACAAGAAAGTGG CAAAGATGCCGAACTTTTATACGGCCCTGGTTATACTGGCCTTGTAAATCTTGGAAATAG TTGCTATATGGCCTCAGTAATGCAAGTTATGTTTTCAACTCATCCTTTTATATCACGCTA CTTTGAGAAGCAGAGCTTGAAAGCTGCATTTGCAATTGCCCCAGCTGATCCAACATTGGA CTTGAACATGCAAATGACAAAGTTGGCTCATGGAATGCTCTCTGGCAAATACTCTGTGCC AAATCAGGAGGGACAAGAAGGAATACACCCTCGTATGTTTAAGACAGTTATTGCTGCAAA GCATCCCGAATTTTCCAGTATGAGGCAACAGGATGCGCTTGATTTCTTCCTTCATCTTAT TGACCAAGTTGATCAGGCAAACACCGGAAACCATGAGCTGAATCCTTTTACAGGGTTCAA ATTCTTCATTGAGGAGCGTCTTCAATGCCCTTCTGGAAAAGTCTCCTATAACAAACGTTC TGACTACATTCTTTCTTTGAACATACCGTTACATGAAGCTACTAACAAAGAGCAGCTAGA AGCATTTCATGAGAAGAAAGCTGCAATGGATTTGGATGGAAAGGAAGTGTCTAATGAGGA AATTGTGAGGCCTAGAGTCCCACTGGAGGCATGCTTAGCAAGTTTTTCAGGCGCGGAGGA AGTGCCTGAATTTTACAGCACTGCATTGAATTCAAAGACAACAGCAATTAAGACTGCTGG CTTTAAAACATTTCCTGATTACCTGGTGTTGCAGATGCGCAAGTTTGTAATGGAAGCAGG ATGGGTGCCAAAGAAACTAGATGTATACGTAGATGTGCCAGATATAATTGATATCTCGCA CATGCGCAGCAAAGGCATACAGCCTGGTGAAGAGCTACTACCTGAAGGAGCTTCTGGTGA TAACAAAGCTGAACCTGTTCATCCTGTTGCCAGTGAGGACATTGTATCTCAGCTGGCAAG CATGGGGTTCAATTATCTTCATTGCCAGAAAGCTGCTATTAGTACATCAAACACAGGAGT TGAGGAGGCGATGAATTGGCTTCTCTCACACATGGATGATCCAGATATCAACGATCCAAT ATCTAAAGATTCACAGGCTGCTGAACAAACTGTTGATGAAACTAGCGTTCAAACTCTTGT TTCCTTCGGATTTCAAGAAGATGTTGCTCGAAAGGCCTTGGCAGCTTCTGGTGGAAATAT CGAGAGAGCAACAGACTGGATTTTTAGCCACCCTGAGGCTTTTAGCTCAGTACCTACTGA TTCTTCAACAAGCAATATGGAAGATGATGATGCACACATACCAGATGGAAGTGGCAGATA CAAATTGATGGCGTTTGTGAGCCATATGGGCACCTCTACCCATTGTGGGCACTACGTTGC CCATGTCCTCAAAGACGGGAGGTGGGTAATATTCAATGATAGTAAGGTTGCTGCCTCTGT CGACTTGCCCAAGGATATGGGATACCTGTATTTCTTTCAAAGGATATAAAGCATTAGCAG CTGAAAGACTTCACAGGCAAGAAATACATTCGCTCGCTGACTTGAGTCTTAGTTATGGGC ACCTATGATCAAAAGCACGGCGGATAGTCGGTGAACTTGCATGCAGATGGACTTAGAGCG AGTGTTGGTCACATCCTGTCGTGCTGACTTTAGACTGATCGATCAGCTGGGATATCACTT TGTTCCATGGCATTATGCATTGGCACATTCAATTCTTCTTTGTCGATCTATCATCTTAGC GTTAACATTCTGCCATGAAAACTTTGGACTGGCTCAACTTTTTACATATGAAATGGAAAA CAAAAGGCAAGGGACGGTCCCTGATGCCGCATATATATTTTGCACATTGTAGCAGAGCGC TGGGTGTTAAAAGATTGGTCCTGGACACC