Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0177100-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:3976431:3984909:1 gene:Os01g0177100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-4 description:Similar to STYLOSA protein. (Os01t0177100-01);Similar to STYLOSA protein. (Os01t0177100-02)
Sequence	ATGGCGCAGCAGCAGCAGCAGCAGAGTGCGTGGGAAGCGGAGAAGATGTTGGACGTGTAC ATCCATGATTATCTTTTGAAGAGGAACCTGCAGAGCACTGCCAAGGCATTCCAAGCAGAA GGCAGCGTGTCTTCCGATCCTGTTGCAATTGATGCCCCAGGGGGTTTCCTCTTGGAGTGG TGGTCTGTCTTCTGGGACATCTTCATTGCAAGGACGAACGAGAAGCACTCTGATGTTGCT GCTTCGTACATTGAGACACAGTCAATTAAAGCTCGAGAGCAGCAGCCATCACAGCTGCAG CAGCAAGAGGCTCATTCCCAGCAGTCATCACAGCAGATCCAAATGCAACAACTCCTACTA CAGAGGCATGCACAGCAGCAGCAGCAGCAGCAGAGTCAGCAACAACCACAGCAACAACGC CGCCAGCAGAAGCAACAACAGCGTAGTGAAAGCAGTCATTTGCCGACAAGTGCACATAAT GGTTTGGTTTCTGCTGATCCTCCAACACGACAAAGCACTTCAGCTGCAAGTTCTTTGTCT GCAAAGATGTACGAGGAGAGGGTGAAGAATTCTGTTCAAAGGGACACCTTAGATGAAGCA CCTGCAAAGCAAAGGTTTACAGAAAATATTGGACAACTGCTGGAATCAAACTCATCATCT ATGCTGAAGTCCGTTGCAATAACAGCTCAGGCTTCAGGGCAAATTTTCCATGGATCAACT GGTGGCGTGTCAGGTACTTTGCAACAGGTTCAGGCCCGGAACCAACAACTCCAGGCATCA ACACAGGAAATAAAGGTAGACACAAATGCTGCTGTACACATGAGAGCTGCAGGGGCAGAT GGATCATTAATTGGAGTACCAGGCGCTAACCCAGCAGGGAACAATTTGACGTTGAAAGGG TGGCCTCTTACTGGCTTAGACCAGCTTAGATCTGGGTTTCTCCAACAGAAATCTTTTATG CAGTCTCCCCAACCATTGCACCATCTACAATTTCTCACTCCACAACAACAGCAGCTTCTG CTTCAAGCACAACAAAATATGACATCTTCACCTGGAGAGATGGACAGCAGAAGGCTTCGG ATGCTTTTGAGTAGCCGAAACATTGTTCCTGGGAGGGATGGTCAATCAAATGCCTACACG GAAGTTATTCCTAGTGTTGGCCCTTCATTGCAAAATATGTGCTCACCTGTGCAGCGCATG GAGACAGATATGCTGATGAAGAAGATAGCAGCTATACAGCAGCACCAGCAAAGCAGCAAT CAGCAACAGCTCCTTCAGCATTCTTTACTTAGCCAGCAACCACCAATCTCTAATCACCTT CCAGGCCAGCAGGAAAAAATGGGAGCTGGAAGTGTTACTATTGATGGAAGCCTGTCTAAT TCATTCCGTGGAAGTGAACAGGTTTCCAAGAATCAAAATGGGCGAAAACGCAAACAGCCA ATCTCATCGTCTGGTCCAGCCAATAGTTCTGGCACTGGAAACACCGCGGTCCCCTCCTCA GAACCCTCAACTCCTTCATCGCAAAGCCCAGGAGACACAATTTCAATGCCCTCGCTGCAC CACAATGCTAGCTTATCAAAGGCTTTAGTTGTTTACGGTACCAGTACAGCAGGGACAATG GGATCACCATCAAATCAACTTGCTGACATGGATCGTTTTGTGGAGGATGGCTGCTTGGAA GATCATGTGGATTCGTTCCTGTCGCATGATGATGCAGATCGAAGAGATGGCAGTCGTATG GAATCTACTAAAGGATTCATCTTCCGAGAGGTCTCTTCTGTACAAGCAAGCACGAACAAG GTTGTATGCTGCCACTTCTCATCAGATGGAAAGCTACTTGCTACTGGGGGTCATGATAAG AAGGTGGTATTGTGGCATGCTGAAACTTTAAAACAGAAGTCAGTATTGGAGGAACATTCT CTTTTGATAACTGATGTACGATTCAGTCCAAGCATTCCACGCCTTGCTACCTCCTCATTT GATAAAACTGTCAGGGTCTGGGATGCTGACAATCAAGGCTATTCAATTCGAACGTTCACT GGGCACTCAGCATCTGTTATGTCACTGGATTTCCACCCAAACAAGGATGACCTCATTTGT TCTTGTGATGGGGATAATGAAATTCGATTCTGGAGTATCAACAATGGAAACATCGTCCGG ATATTTAAGGGAGGATCAAGCCAGCTGAGATTTCAACCACGTCATGGGGGATATCTTGCA GTAGCTTCGGAGAATGCTGTCTCTATACTTGATGTGGAGACTCAAGCTTGCCTTAGGAGA TTTGAGGGCCACACAAAGCATGTCGATTCAGTATGCTGGGATCCCAGTGGCGAATATGTT GTATCTGTCAGTGAAGACACGGTGAAGGTGTGGTCTGTGAATGCTGGGAGCGATGATCGC TGCGTGCAAGAGCTTAGCTGTACCGGGAGCAAGTTTCACTCGTGTGCTTTCCACCCTTCA TATTCATCTATGCTTATCATTGGTTGTTACCAGTCTCTTGAGCTGTGGGACATGTCGGAG AACAGAACGATGACGCTCGCAGCTCATGACAGCCTCATCACAGCCCTGGCGTCGTCAAGC TCCGGTTTGGTCGCTTCCACGAGCCACGACAAGTTCGTCAAGCTGTGGAAATGA

Peptide Sequence

PEP ID	Os01t0177100-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:3976431:3984909:1 gene:Os01g0177100 transcript:Os01t0177100-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-4 description:Similar to STYLOSA protein. (Os01t0177100-01);Similar to STYLOSA protein. (Os01t0177100-02)
Sequence	MAQQQQQQSAWEAEKMLDVYIHDYLLKRNLQSTAKAFQAEGSVSSDPVAIDAPGGFLLEW WSVFWDIFIARTNEKHSDVAASYIETQSIKAREQQPSQLQQQEAHSQQSSQQIQMQQLLL QRHAQQQQQQQSQQQPQQQRRQQKQQQRSESSHLPTSAHNGLVSADPPTRQSTSAASSLS AKMYEERVKNSVQRDTLDEAPAKQRFTENIGQLLESNSSSMLKSVAITAQASGQIFHGST GGVSGTLQQVQARNQQLQASTQEIKVDTNAAVHMRAAGADGSLIGVPGANPAGNNLTLKG WPLTGLDQLRSGFLQQKSFMQSPQPLHHLQFLTPQQQQLLLQAQQNMTSSPGEMDSRRLR MLLSSRNIVPGRDGQSNAYTEVIPSVGPSLQNMCSPVQRMETDMLMKKIAAIQQHQQSSN QQQLLQHSLLSQQPPISNHLPGQQEKMGAGSVTIDGSLSNSFRGSEQVSKNQNGRKRKQP ISSSGPANSSGTGNTAVPSSEPSTPSSQSPGDTISMPSLHHNASLSKALVVYGTSTAGTM GSPSNQLADMDRFVEDGCLEDHVDSFLSHDDADRRDGSRMESTKGFIFREVSSVQASTNK VVCCHFSSDGKLLATGGHDKKVVLWHAETLKQKSVLEEHSLLITDVRFSPSIPRLATSSF DKTVRVWDADNQGYSIRTFTGHSASVMSLDFHPNKDDLICSCDGDNEIRFWSINNGNIVR IFKGGSSQLRFQPRHGGYLAVASENAVSILDVETQACLRRFEGHTKHVDSVCWDPSGEYV VSVSEDTVKVWSVNAGSDDRCVQELSCTGSKFHSCAFHPSYSSMLIIGCYQSLELWDMSE NRTMTLAAHDSLITALASSSSGLVASTSHDKFVKLWK

Transcript Sequence

Transcript ID	Os01t0177100-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:3976431:3984909:1 gene:Os01g0177100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-4 description:Similar to STYLOSA protein. (Os01t0177100-01);Similar to STYLOSA protein. (Os01t0177100-02)
Sequence	GTGTTTAGCGTGCGTGACCGCGAGCGAGGTCGAGGAGTGAGAGGGAGTGAGGCGGCGGCG GCGGCGGCCATGGCGCAGCAGCAGCAGCAGCAGAGTGCGTGGGAAGCGGAGAAGATGTTG GACGTGTACATCCATGATTATCTTTTGAAGAGGAACCTGCAGAGCACTGCCAAGGCATTC CAAGCAGAAGGCAGCGTGTCTTCCGATCCTGTTGCAATTGATGCCCCAGGGGGTTTCCTC TTGGAGTGGTGGTCTGTCTTCTGGGACATCTTCATTGCAAGGACGAACGAGAAGCACTCT GATGTTGCTGCTTCGTACATTGAGACACAGTCAATTAAAGCTCGAGAGCAGCAGCCATCA CAGCTGCAGCAGCAAGAGGCTCATTCCCAGCAGTCATCACAGCAGATCCAAATGCAACAA CTCCTACTACAGAGGCATGCACAGCAGCAGCAGCAGCAGCAGAGTCAGCAACAACCACAG CAACAACGCCGCCAGCAGAAGCAACAACAGCGTAGTGAAAGCAGTCATTTGCCGACAAGT GCACATAATGGTTTGGTTTCTGCTGATCCTCCAACACGACAAAGCACTTCAGCTGCAAGT TCTTTGTCTGCAAAGATGTACGAGGAGAGGGTGAAGAATTCTGTTCAAAGGGACACCTTA GATGAAGCACCTGCAAAGCAAAGGTTTACAGAAAATATTGGACAACTGCTGGAATCAAAC TCATCATCTATGCTGAAGTCCGTTGCAATAACAGCTCAGGCTTCAGGGCAAATTTTCCAT GGATCAACTGGTGGCGTGTCAGGTACTTTGCAACAGGTTCAGGCCCGGAACCAACAACTC CAGGCATCAACACAGGAAATAAAGGTAGACACAAATGCTGCTGTACACATGAGAGCTGCA GGGGCAGATGGATCATTAATTGGAGTACCAGGCGCTAACCCAGCAGGGAACAATTTGACG TTGAAAGGGTGGCCTCTTACTGGCTTAGACCAGCTTAGATCTGGGTTTCTCCAACAGAAA TCTTTTATGCAGTCTCCCCAACCATTGCACCATCTACAATTTCTCACTCCACAACAACAG CAGCTTCTGCTTCAAGCACAACAAAATATGACATCTTCACCTGGAGAGATGGACAGCAGA AGGCTTCGGATGCTTTTGAGTAGCCGAAACATTGTTCCTGGGAGGGATGGTCAATCAAAT GCCTACACGGAAGTTATTCCTAGTGTTGGCCCTTCATTGCAAAATATGTGCTCACCTGTG CAGCGCATGGAGACAGATATGCTGATGAAGAAGATAGCAGCTATACAGCAGCACCAGCAA AGCAGCAATCAGCAACAGCTCCTTCAGCATTCTTTACTTAGCCAGCAACCACCAATCTCT AATCACCTTCCAGGCCAGCAGGAAAAAATGGGAGCTGGAAGTGTTACTATTGATGGAAGC CTGTCTAATTCATTCCGTGGAAGTGAACAGGTTTCCAAGAATCAAAATGGGCGAAAACGC AAACAGCCAATCTCATCGTCTGGTCCAGCCAATAGTTCTGGCACTGGAAACACCGCGGTC CCCTCCTCAGAACCCTCAACTCCTTCATCGCAAAGCCCAGGAGACACAATTTCAATGCCC TCGCTGCACCACAATGCTAGCTTATCAAAGGCTTTAGTTGTTTACGGTACCAGTACAGCA GGGACAATGGGATCACCATCAAATCAACTTGCTGACATGGATCGTTTTGTGGAGGATGGC TGCTTGGAAGATCATGTGGATTCGTTCCTGTCGCATGATGATGCAGATCGAAGAGATGGC AGTCGTATGGAATCTACTAAAGGATTCATCTTCCGAGAGGTCTCTTCTGTACAAGCAAGC ACGAACAAGGTTGTATGCTGCCACTTCTCATCAGATGGAAAGCTACTTGCTACTGGGGGT CATGATAAGAAGGTGGTATTGTGGCATGCTGAAACTTTAAAACAGAAGTCAGTATTGGAG GAACATTCTCTTTTGATAACTGATGTACGATTCAGTCCAAGCATTCCACGCCTTGCTACC TCCTCATTTGATAAAACTGTCAGGGTCTGGGATGCTGACAATCAAGGCTATTCAATTCGA ACGTTCACTGGGCACTCAGCATCTGTTATGTCACTGGATTTCCACCCAAACAAGGATGAC CTCATTTGTTCTTGTGATGGGGATAATGAAATTCGATTCTGGAGTATCAACAATGGAAAC ATCGTCCGGATATTTAAGGGAGGATCAAGCCAGCTGAGATTTCAACCACGTCATGGGGGA TATCTTGCAGTAGCTTCGGAGAATGCTGTCTCTATACTTGATGTGGAGACTCAAGCTTGC CTTAGGAGATTTGAGGGCCACACAAAGCATGTCGATTCAGTATGCTGGGATCCCAGTGGC GAATATGTTGTATCTGTCAGTGAAGACACGGTGAAGGTGTGGTCTGTGAATGCTGGGAGC GATGATCGCTGCGTGCAAGAGCTTAGCTGTACCGGGAGCAAGTTTCACTCGTGTGCTTTC CACCCTTCATATTCATCTATGCTTATCATTGGTTGTTACCAGTCTCTTGAGCTGTGGGAC ATGTCGGAGAACAGAACGATGACGCTCGCAGCTCATGACAGCCTCATCACAGCCCTGGCG TCGTCAAGCTCCGGTTTGGTCGCTTCCACGAGCCACGACAAGTTCGTCAAGCTGTGGAAA TGATGTGCTTTCAAGCTAGCCGCGCCCTCTAACCCTCTTCTAAGGATGGGCCTTTTTCTT CCTCATTTTTTGGTCACACCATCAGCTCTGAAGAGCTATTGTGTGATGATGGTATAAACA CTCTATATGGTATAATATCCCCCACAAAGTAGCTGGCTACTGAATGACTGATGAAAATAT TGCTATCCTAGTATACCTTTTGCTGACCCTGGGAAAGTAGCATTTTGTACAGAACATGAA CTATGCTTTAGTATTAATCATAGTCTATCTGAACTACTGAAGTGTTTATGGTCTGAATTC TAAGAAGTTATTCTGCTGCATCTCTGCTATGAATATGAAGAATGTGATGAATGTGGCATT CTCGTAGGAATTTCAAGGGACTTTTTTTGTAAGAAGTATGCTCAATTCCAGCAAGAAATT GGAAATTTTCTTAC