Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0176800-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:3958210:3962124:1 gene:Os01g0176800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF2921 domain containing protein. (Os01t0176800-01)
Sequence	ATGGTGTCAAGAAGTCTGCAGCTTGTCGGCGCGTTGCTGCTGCCGCTGCTCGCCGTCGTG TCGTCGTTTGATCCGTTCCACCGTGATGCGAACCCCATGGGCGGCGGCGCCGGGCAGGGC CCCTTCATCCCCCACGAGTACGTCCGCTTCGCCGACGTGAAGCGGCAGTGCAAGTCCGTG CTCTCCTCCGCGGCGGAGCTCACGTTCGACGCCAACCGCGCCAACGGCCTCATGCCGGAG CTGTCCTTCGTCAAGGGTGACTGGAAGCACGACGGCGACGGCGACGGCGGCGGCGGCGCG CCGCTGCTGCCATTCGACGGCACCGACGTGGCGGAGGACGCCGCCGCCGGGGCGGCGCGC GACCCGCTGCCGCTCGCGTCGTTCTCGCTCACGCACGTCGACGCGGCGCGGCGCGGGAGG ACGGCGCTGAACGTGAGCGGCGTGCTCGGCGTCGCCATCTCCCGCAACGGCACCGGGCCG GAGATGGGGCCGTACGTGTCGCCGGAGTTCAAGGTGTGGCCCGGGAACACCGAGCTGAAG GTGCTGCTCGAGGGGGTGTACACCGAGAACGACGACGGCGAGAGCGTGCTGTGCATGGTC GGCGACGCCGTCCTGCCGGCGCGCGGCGGCGACGCCGCCAACCCGTGGGGCTGGGCCAAG CACTCCGACCGCGACAGGTTCCAGCCGCCGATCACCAAGGACGGCAACATCCTCCTCGTG CTCCGCTACCCCAAGACGCTGACGCTGACGACGCGCGCCGTCCACGGCGAGCTCACGAGC ACCAATGGCAAGACCCACGCCGCCTACTTCGACGCCGTGCACCTGCTGTCGCAGCTCGGC GCCTACTCCAACTACCAGTTCGGCTCCGAGGAGCTCGTCGGCACGGCGTGCAAGCCCCAC CCGTACCGCGACGACGTCCTCGCCGGCGGCGGCGGGGACAGGGGGCTGTACAAGGGCACC TCCTTCTGCGGCATCCTCGACAGGTTCACGTCGGAGGACGTGCTCGCCGTCGTGCCGAAC TGGAGGTGCAACACGACGGACGACGCGCTCTGCCGGCGGCTGGGGCCGTTCGAGACGGAC AAGGCGGTGGACGCCACCGACGGCGGGTTCGCCGGCGTCAGGATCGTGATGCAGGAGGTC CGGTGCGAGCCGAGGACCGACGGCGGCGAGATCTCGGCGAGGGTGTCGGCGGTGTTCCGC GCCGTCCCGCCGTGGGAGCACGCGTACACGGCGGCGAAGCGCAGCGGGCTCGGCGGCGCG ACGATGTCCGCCGAGGGCGTGTGGCGCGCGTCCTCCGGCCAGCTCTGCATGGTGGCGTGC CTCGGCGTCGGCGCCAAGGCGTGCCACTCCCGCGTGTGCCTCTACCTGCAGACCACCTTC TCCGCCACTCGCCGCAGCATCACGGTGGGCCAGATCACCAGCATCGGCGGCGGTGCCGCC CACTTCCCGCCGCTGACGTTCCAGCGGACGGTGCACCCGATGGAGCTGTGGAGCCGGTTC GGCGTCACCGGCGGCGAGCCGCTGAGCTTGGCGTACAGCTACACCAAGACCAAGCAGGCC GGCGAGTTCCTCCGGCGAAGCGAGCCGTTCGACTTCGGCACCGTCATCGCCAAGTCGCTG CTGAGCTACCCGAGGAAATCCGGCGACGCCGCCGACGAGACGACGAGCCTCTCCAACCTC GCCGAGGAGCTCACGCTCCACGTCGCCGCCGTGCCGGATCCGTTCCCACGCGGACGATTC GAGCGGCCATTCCTTCAGCTTGAGGTGCTCTCGCTCGGATCGCTCGTCGGCCGGGCCTCG CCGGCGACGTTTCCGGGGACGCCAGCTGCGGTAGGGCAAAGCATGGCATCATCATCGTCG TCGACGACGACGAAGCTGGATGCGACGGCTATCCTCAACGTGTCGGCGGAGCTGACGATC TCCGGCGACGCGTACGTGAACGTGTCGACGCTGTCCTTGGAAGGCGTGTACAACCCGGTG GATGGCCGGATGTACCTCATCGGCTGCCGGAGAATCCAGGCGCCGTGGCGAGCCTTCTCG GCGATGGGCGGCGTCGAGGAAGGCATGGACTGCTCGATCGAGGTGAGGGTGGAGTACCCG CCGACGACGGCGCGGTGGCTGATCAACCCGACGGCGAAGGTGCACATCGCGAGCACGCGC GGCGGCGGCGACGACCCGCTGCGGTTCAACGCGACGGCGCTCCAGACGCTGCCGATCCTG TACCGGGAACAGCGGCAGGACATCCTGTCGCGGCGGAGCGTGGAGGGGATCCTCCGCGTC GTGACGCTGGCGGCGGCGATCGCCGCCGAGTTCAGCCAGCTCATGTACATCAAGTCCCAC ACCGACGTGATGCCGTACGTGTCGGTGGTGATGCTGGGCGTCCAGGCAGTCGGCTACAGC GTGCCGCTCATCACCGGCGCGGAGGCGCTGTTCGCGCGCATCGCCGCGTCGAGCGGCGAC GGCGGCGCGACGCCGCCGCCGTCGTACGAGGTGGACAAGAGCCAGCTCTACTGGACCATC GACTGCGTCGTCAAGATCCTCATCCTCGCCGCGTTCCTCCTCACGCTCCGGCTGGTGCAG AAGGTGTGGCGCTCCCGCATCCGCCTCCTCACCCGCTCGCCGCTGGAGCCAGGGCGCGTG CCCAGCGACAAGAAGGTCCTCGTCTACACCTCCGGCGCGCACCTCGTCGGCTTCGCGGTG GTCCTCGCGGCGCACTACGTGAGCGTGCTGGCGCGGCCGGTGAGGTCGGAGGCGTCGTAC ATGGACGCGCGCGGCGAGGCGCACGCGCTCCGGGAGTGGGCGGTGACGCTGGAGGAGTAC ATCGGGCTCGCCCAGGACATGTTCCTGCTGCCGCAGGTGATCGGGAACGTGGTGTGGCGG ATCAACTGCCGGCCGCTGAAGACGGGGTACTACGCCGGCTTGACGGCGGTGAGGCTGCTG CCGCACGTGTACGACTACGTGAGGGCGCCGGCGATCAACCCCTACTTCGCGGAGGAGTAC GAGTTCGTGAACACCAGCCTCGACTTCTACTCCAGGTCCGGCGACGTCGCCATCCCGCTC GCCGCCGTCGCGCTCGCCGCGGCGGTGTACGTGCAGCAGCGGTGGAACTACAAGATCATC AGCAAGACGGTGAAGACGCAGCAGAAGAAGCTGCAGCACCTCGGGTCGCGGGTGTACGAG CGACTGCCGTCCATGTCGTCGGCCAACTTCGAGGCCGAGCTCGTCGCCGGCGTCAACGAG GGCGTCGGCCATGGCCTCCGCCGCGACGCCAGCTTGAGCTAG

Peptide Sequence

PEP ID	Os01t0176800-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:3958210:3962124:1 gene:Os01g0176800 transcript:Os01t0176800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF2921 domain containing protein. (Os01t0176800-01)
Sequence	MVSRSLQLVGALLLPLLAVVSSFDPFHRDANPMGGGAGQGPFIPHEYVRFADVKRQCKSV LSSAAELTFDANRANGLMPELSFVKGDWKHDGDGDGGGGAPLLPFDGTDVAEDAAAGAAR DPLPLASFSLTHVDAARRGRTALNVSGVLGVAISRNGTGPEMGPYVSPEFKVWPGNTELK VLLEGVYTENDDGESVLCMVGDAVLPARGGDAANPWGWAKHSDRDRFQPPITKDGNILLV LRYPKTLTLTTRAVHGELTSTNGKTHAAYFDAVHLLSQLGAYSNYQFGSEELVGTACKPH PYRDDVLAGGGGDRGLYKGTSFCGILDRFTSEDVLAVVPNWRCNTTDDALCRRLGPFETD KAVDATDGGFAGVRIVMQEVRCEPRTDGGEISARVSAVFRAVPPWEHAYTAAKRSGLGGA TMSAEGVWRASSGQLCMVACLGVGAKACHSRVCLYLQTTFSATRRSITVGQITSIGGGAA HFPPLTFQRTVHPMELWSRFGVTGGEPLSLAYSYTKTKQAGEFLRRSEPFDFGTVIAKSL LSYPRKSGDAADETTSLSNLAEELTLHVAAVPDPFPRGRFERPFLQLEVLSLGSLVGRAS PATFPGTPAAVGQSMASSSSSTTTKLDATAILNVSAELTISGDAYVNVSTLSLEGVYNPV DGRMYLIGCRRIQAPWRAFSAMGGVEEGMDCSIEVRVEYPPTTARWLINPTAKVHIASTR GGGDDPLRFNATALQTLPILYREQRQDILSRRSVEGILRVVTLAAAIAAEFSQLMYIKSH TDVMPYVSVVMLGVQAVGYSVPLITGAEALFARIAASSGDGGATPPPSYEVDKSQLYWTI DCVVKILILAAFLLTLRLVQKVWRSRIRLLTRSPLEPGRVPSDKKVLVYTSGAHLVGFAV VLAAHYVSVLARPVRSEASYMDARGEAHALREWAVTLEEYIGLAQDMFLLPQVIGNVVWR INCRPLKTGYYAGLTAVRLLPHVYDYVRAPAINPYFAEEYEFVNTSLDFYSRSGDVAIPL AAVALAAAVYVQQRWNYKIISKTVKTQQKKLQHLGSRVYERLPSMSSANFEAELVAGVNE GVGHGLRRDASLS

Transcript Sequence

Transcript ID	Os01t0176800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:3958210:3962124:1 gene:Os01g0176800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF2921 domain containing protein. (Os01t0176800-01)
Sequence	GTACTAGAGCCGTCCTTGGTGAACAGTTCTTCGACACTCACCTCACTCTCATCGAGGTCT CCCAGCTTGAGGAGCACTGAAGAAATTTCTATGTTGAGCAATGGTGTCAAGAAGTCTGCA GCTTGTCGGCGCGTTGCTGCTGCCGCTGCTCGCCGTCGTGTCGTCGTTTGATCCGTTCCA CCGTGATGCGAACCCCATGGGCGGCGGCGCCGGGCAGGGCCCCTTCATCCCCCACGAGTA CGTCCGCTTCGCCGACGTGAAGCGGCAGTGCAAGTCCGTGCTCTCCTCCGCGGCGGAGCT CACGTTCGACGCCAACCGCGCCAACGGCCTCATGCCGGAGCTGTCCTTCGTCAAGGGTGA CTGGAAGCACGACGGCGACGGCGACGGCGGCGGCGGCGCGCCGCTGCTGCCATTCGACGG CACCGACGTGGCGGAGGACGCCGCCGCCGGGGCGGCGCGCGACCCGCTGCCGCTCGCGTC GTTCTCGCTCACGCACGTCGACGCGGCGCGGCGCGGGAGGACGGCGCTGAACGTGAGCGG CGTGCTCGGCGTCGCCATCTCCCGCAACGGCACCGGGCCGGAGATGGGGCCGTACGTGTC GCCGGAGTTCAAGGTGTGGCCCGGGAACACCGAGCTGAAGGTGCTGCTCGAGGGGGTGTA CACCGAGAACGACGACGGCGAGAGCGTGCTGTGCATGGTCGGCGACGCCGTCCTGCCGGC GCGCGGCGGCGACGCCGCCAACCCGTGGGGCTGGGCCAAGCACTCCGACCGCGACAGGTT CCAGCCGCCGATCACCAAGGACGGCAACATCCTCCTCGTGCTCCGCTACCCCAAGACGCT GACGCTGACGACGCGCGCCGTCCACGGCGAGCTCACGAGCACCAATGGCAAGACCCACGC CGCCTACTTCGACGCCGTGCACCTGCTGTCGCAGCTCGGCGCCTACTCCAACTACCAGTT CGGCTCCGAGGAGCTCGTCGGCACGGCGTGCAAGCCCCACCCGTACCGCGACGACGTCCT CGCCGGCGGCGGCGGGGACAGGGGGCTGTACAAGGGCACCTCCTTCTGCGGCATCCTCGA CAGGTTCACGTCGGAGGACGTGCTCGCCGTCGTGCCGAACTGGAGGTGCAACACGACGGA CGACGCGCTCTGCCGGCGGCTGGGGCCGTTCGAGACGGACAAGGCGGTGGACGCCACCGA CGGCGGGTTCGCCGGCGTCAGGATCGTGATGCAGGAGGTCCGGTGCGAGCCGAGGACCGA CGGCGGCGAGATCTCGGCGAGGGTGTCGGCGGTGTTCCGCGCCGTCCCGCCGTGGGAGCA CGCGTACACGGCGGCGAAGCGCAGCGGGCTCGGCGGCGCGACGATGTCCGCCGAGGGCGT GTGGCGCGCGTCCTCCGGCCAGCTCTGCATGGTGGCGTGCCTCGGCGTCGGCGCCAAGGC GTGCCACTCCCGCGTGTGCCTCTACCTGCAGACCACCTTCTCCGCCACTCGCCGCAGCAT CACGGTGGGCCAGATCACCAGCATCGGCGGCGGTGCCGCCCACTTCCCGCCGCTGACGTT CCAGCGGACGGTGCACCCGATGGAGCTGTGGAGCCGGTTCGGCGTCACCGGCGGCGAGCC GCTGAGCTTGGCGTACAGCTACACCAAGACCAAGCAGGCCGGCGAGTTCCTCCGGCGAAG CGAGCCGTTCGACTTCGGCACCGTCATCGCCAAGTCGCTGCTGAGCTACCCGAGGAAATC CGGCGACGCCGCCGACGAGACGACGAGCCTCTCCAACCTCGCCGAGGAGCTCACGCTCCA CGTCGCCGCCGTGCCGGATCCGTTCCCACGCGGACGATTCGAGCGGCCATTCCTTCAGCT TGAGGTGCTCTCGCTCGGATCGCTCGTCGGCCGGGCCTCGCCGGCGACGTTTCCGGGGAC GCCAGCTGCGGTAGGGCAAAGCATGGCATCATCATCGTCGTCGACGACGACGAAGCTGGA TGCGACGGCTATCCTCAACGTGTCGGCGGAGCTGACGATCTCCGGCGACGCGTACGTGAA CGTGTCGACGCTGTCCTTGGAAGGCGTGTACAACCCGGTGGATGGCCGGATGTACCTCAT CGGCTGCCGGAGAATCCAGGCGCCGTGGCGAGCCTTCTCGGCGATGGGCGGCGTCGAGGA AGGCATGGACTGCTCGATCGAGGTGAGGGTGGAGTACCCGCCGACGACGGCGCGGTGGCT GATCAACCCGACGGCGAAGGTGCACATCGCGAGCACGCGCGGCGGCGGCGACGACCCGCT GCGGTTCAACGCGACGGCGCTCCAGACGCTGCCGATCCTGTACCGGGAACAGCGGCAGGA CATCCTGTCGCGGCGGAGCGTGGAGGGGATCCTCCGCGTCGTGACGCTGGCGGCGGCGAT CGCCGCCGAGTTCAGCCAGCTCATGTACATCAAGTCCCACACCGACGTGATGCCGTACGT GTCGGTGGTGATGCTGGGCGTCCAGGCAGTCGGCTACAGCGTGCCGCTCATCACCGGCGC GGAGGCGCTGTTCGCGCGCATCGCCGCGTCGAGCGGCGACGGCGGCGCGACGCCGCCGCC GTCGTACGAGGTGGACAAGAGCCAGCTCTACTGGACCATCGACTGCGTCGTCAAGATCCT CATCCTCGCCGCGTTCCTCCTCACGCTCCGGCTGGTGCAGAAGGTGTGGCGCTCCCGCAT CCGCCTCCTCACCCGCTCGCCGCTGGAGCCAGGGCGCGTGCCCAGCGACAAGAAGGTCCT CGTCTACACCTCCGGCGCGCACCTCGTCGGCTTCGCGGTGGTCCTCGCGGCGCACTACGT GAGCGTGCTGGCGCGGCCGGTGAGGTCGGAGGCGTCGTACATGGACGCGCGCGGCGAGGC GCACGCGCTCCGGGAGTGGGCGGTGACGCTGGAGGAGTACATCGGGCTCGCCCAGGACAT GTTCCTGCTGCCGCAGGTGATCGGGAACGTGGTGTGGCGGATCAACTGCCGGCCGCTGAA GACGGGGTACTACGCCGGCTTGACGGCGGTGAGGCTGCTGCCGCACGTGTACGACTACGT GAGGGCGCCGGCGATCAACCCCTACTTCGCGGAGGAGTACGAGTTCGTGAACACCAGCCT CGACTTCTACTCCAGGTCCGGCGACGTCGCCATCCCGCTCGCCGCCGTCGCGCTCGCCGC GGCGGTGTACGTGCAGCAGCGGTGGAACTACAAGATCATCAGCAAGACGGTGAAGACGCA GCAGAAGAAGCTGCAGCACCTCGGGTCGCGGGTGTACGAGCGACTGCCGTCCATGTCGTC GGCCAACTTCGAGGCCGAGCTCGTCGCCGGCGTCAACGAGGGCGTCGGCCATGGCCTCCG CCGCGACGCCAGCTTGAGCTAGCTAGCTACACTGCTACACCTCATCGATCAATCGCCTCT CTTAATTACTCAGTAGTCTTCTCTTGTTGCTTTCTTAGGTTTTTATGATGTTCTTCTTCT TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTATTTCTTCTTAATTAGATCTTC AGATTCTTCTTATGATATCCAAATGTACTCTACTACAAGTTCAATAAAGTTTTAGTTTCT TAT