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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0175100-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:3855147:3856033:-1 gene:Os01g0175100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Kv1.4 voltage-gated K+ channel family protein. (Os01t0175100-01)
Sequence

ATGGCGATTGCATCGGGGGCGGCTTTCTCGGTGAGGCCTTCGCCGGCGGCGGCGAGGCCG
TGCGTCGCGGCGTCCGCGTCGGCCGCCGGCGCGGCGAGGTTCCGCGGCGACGGGAGCGGT
GGCGGAGGCGGAGGCGGAGGCGGCGGGAAGTGGTGGGCGCCGCTGCTGGGGTGGTCGGGG
CAGCCCGACTACATCGACGCGCAGCCGGCGGCGCGGGAGGAGGCGCGGCCGAATCCGATG
GCGGCGGCGGAGCAGCGTGGCGGCGGCGGGAAGAGGTTCGGCGTGCTGACGGAGGAGAAG
GCGCGGCAGCTGCGCGCACGGATGATGGAGACGGAGAGCTTCCACGACTGCATGTACCAC
TCCGCCATCGCCTCCCGCCTCGCCTCCGCCGCCCCCGCCGACGACGGCAAGCACTGA

Peptide Sequence

PEP ID

Os01t0175100-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:3855147:3856033:-1 gene:Os01g0175100 transcript:Os01t0175100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Kv1.4 voltage-gated K+ channel family protein. (Os01t0175100-01)
Sequence

MAIASGAAFSVRPSPAAARPCVAASASAAGAARFRGDGSGGGGGGGGGGKWWAPLLGWSG
QPDYIDAQPAAREEARPNPMAAAEQRGGGGKRFGVLTEEKARQLRARMMETESFHDCMYH
SAIASRLASAAPADDGKH

Transcript Sequence

Transcript ID

Os01t0175100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:3855147:3856033:-1 gene:Os01g0175100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Kv1.4 voltage-gated K+ channel family protein. (Os01t0175100-01)
Sequence

GATCCACTTCAAAATTCGGAGGGAGGAATCCAAATCGAATCGAATCGAATCGAAGAAGCT
TGGGGGGATATTCTTGATTTGATTTGTTGTTGGAAGAGAAGCAAATCCAATGGCGATTGC
ATCGGGGGCGGCTTTCTCGGTGAGGCCTTCGCCGGCGGCGGCGAGGCCGTGCGTCGCGGC
GTCCGCGTCGGCCGCCGGCGCGGCGAGGTTCCGCGGCGACGGGAGCGGTGGCGGAGGCGG
AGGCGGAGGCGGCGGGAAGTGGTGGGCGCCGCTGCTGGGGTGGTCGGGGCAGCCCGACTA
CATCGACGCGCAGCCGGCGGCGCGGGAGGAGGCGCGGCCGAATCCGATGGCGGCGGCGGA
GCAGCGTGGCGGCGGCGGGAAGAGGTTCGGCGTGCTGACGGAGGAGAAGGCGCGGCAGCT
GCGCGCACGGATGATGGAGACGGAGAGCTTCCACGACTGCATGTACCACTCCGCCATCGC
CTCCCGCCTCGCCTCCGCCGCCCCCGCCGACGACGGCAAGCACTGAGCCGCCGCCGCCAT
CCATGGCTCCCCGCCTCTGCCCATACCGCGCCGCCATCCAACGCCGATGATGATGATGAT
GTTGTTGTGTCGTTTTGGTATCAATAACGTCGCCGCCGCCGACGCCGTCAATGGCCGGAG
AAGTATTAGTATGAGGCCTCGACGGCGGCGTGCTTGTCGGATTGATTCCATGGAGATGGG
ATGATTTCATCCTAATATCTCCATTTCTGTAACTCATAGTATAGCAGCTAATGCATCTAA
ACGTTGTTGTAACAAGAAATTTAATCTGGTTTCTTCAACCATGGCTTCTTCTGTACTATA
CATCACAATCACTCTGAAATTTTCAGAAATTTCAGTGTTCATTTTTT